BLASTX nr result

ID: Zingiber23_contig00054005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00054005
         (400 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003580485.1| PREDICTED: uncharacterized protein LOC100846...    67   2e-09
gb|EAY95331.1| hypothetical protein OsI_17159 [Oryza sativa Indi...    63   5e-08
ref|NP_001174072.1| Os04g0588000 [Oryza sativa Japonica Group] g...    63   5e-08
ref|XP_004953495.1| PREDICTED: serine/arginine repetitive matrix...    60   2e-07
ref|NP_001047784.1| Os02g0689500 [Oryza sativa Japonica Group] g...    56   6e-06
gb|AFW63440.1| transposon protein [Zea mays]                           56   6e-06
ref|XP_003570129.1| PREDICTED: uncharacterized protein LOC100829...    56   6e-06
gb|EEE57606.1| hypothetical protein OsJ_07987 [Oryza sativa Japo...    56   6e-06
ref|XP_002448418.1| hypothetical protein SORBIDRAFT_06g026790 [S...    55   7e-06

>ref|XP_003580485.1| PREDICTED: uncharacterized protein LOC100846061 [Brachypodium
           distachyon]
          Length = 282

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/61 (55%), Positives = 40/61 (65%), Gaps = 7/61 (11%)
 Frame = +1

Query: 46  MKCSWHPWERGVGVCASCLRERLLALTTEVQVA-------PSPELPSSMEFPRSVSPYAS 204
           M+C  HP+E GVGVCASCLR+RLLAL      A       P+P+ P+   FPRSVSPY S
Sbjct: 1   MRCKRHPYECGVGVCASCLRDRLLALAAAQNEASSLPPAPPTPDQPAVQLFPRSVSPYVS 60

Query: 205 R 207
           R
Sbjct: 61  R 61


>gb|EAY95331.1| hypothetical protein OsI_17159 [Oryza sativa Indica Group]
           gi|222629441|gb|EEE61573.1| hypothetical protein
           OsJ_15946 [Oryza sativa Japonica Group]
          Length = 283

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 34/57 (59%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
 Frame = +1

Query: 46  MKCSWHPWERGVGVCASCLRERLLALT---TEVQVAPSPELPSSMEFPRSVSPYASR 207
           MKCS HP+E GVGVCA CLR+RLLAL     E    P P  P  + FPRSVSPY  R
Sbjct: 1   MKCSRHPYEGGVGVCAPCLRDRLLALAAAQNEASSLPPPPEPVPV-FPRSVSPYVCR 56


>ref|NP_001174072.1| Os04g0588000 [Oryza sativa Japonica Group]
           gi|32488772|emb|CAE04325.1| OSJNBb0016D16.16 [Oryza
           sativa Japonica Group] gi|255675732|dbj|BAH92800.1|
           Os04g0588000 [Oryza sativa Japonica Group]
          Length = 152

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 34/57 (59%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
 Frame = +1

Query: 46  MKCSWHPWERGVGVCASCLRERLLALT---TEVQVAPSPELPSSMEFPRSVSPYASR 207
           MKCS HP+E GVGVCA CLR+RLLAL     E    P P  P  + FPRSVSPY  R
Sbjct: 1   MKCSRHPYEGGVGVCAPCLRDRLLALAAAQNEASSLPPPPEPVPV-FPRSVSPYVCR 56


>ref|XP_004953495.1| PREDICTED: serine/arginine repetitive matrix protein 1-like
           [Setaria italica]
          Length = 294

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/64 (50%), Positives = 38/64 (59%), Gaps = 10/64 (15%)
 Frame = +1

Query: 46  MKCSWHPWERGVGVCASCLRERLLALTTE----------VQVAPSPELPSSMEFPRSVSP 195
           M+C  H ++ G GVCA+CLR+RLLAL  E           Q  P+PE P    FPRSVSP
Sbjct: 1   MRCKQHTYQAGGGVCATCLRDRLLALAAERNGASSPPSPAQAPPAPE-PEPAAFPRSVSP 59

Query: 196 YASR 207
           Y SR
Sbjct: 60  YVSR 63


>ref|NP_001047784.1| Os02g0689500 [Oryza sativa Japonica Group]
           gi|41052806|dbj|BAD07674.1| unknown protein [Oryza
           sativa Japonica Group] gi|113537315|dbj|BAF09698.1|
           Os02g0689500 [Oryza sativa Japonica Group]
           gi|125540730|gb|EAY87125.1| hypothetical protein
           OsI_08527 [Oryza sativa Indica Group]
           gi|215704259|dbj|BAG93099.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 290

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/61 (47%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
 Frame = +1

Query: 46  MKCSWHPWERGVGVCASCLRERLLALTTEVQVAPS-------PELPSSMEFPRSVSPYAS 204
           M+C  HP++ G GVCA+CL +RLLAL      A S       P   ++  FPRSVSPY S
Sbjct: 3   MRCKKHPYQAGGGVCATCLNDRLLALAAAQNGASSSPPPPAAPPAAAAPAFPRSVSPYVS 62

Query: 205 R 207
           R
Sbjct: 63  R 63


>gb|AFW63440.1| transposon protein [Zea mays]
          Length = 291

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/61 (49%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
 Frame = +1

Query: 46  MKCSWHPWERGVGVCASCLRERLLALTTEVQVAPSPELPSSME-------FPRSVSPYAS 204
           M+C  HP + G GVCA+CLR+RLLAL        SP  P+  +       FPRSVSPY S
Sbjct: 1   MRCKRHPNQAGGGVCATCLRDRLLALEAAQSGDASPPGPAQAQAPEPPPAFPRSVSPYVS 60

Query: 205 R 207
           R
Sbjct: 61  R 61


>ref|XP_003570129.1| PREDICTED: uncharacterized protein LOC100829398 [Brachypodium
           distachyon]
          Length = 304

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/66 (45%), Positives = 35/66 (53%), Gaps = 12/66 (18%)
 Frame = +1

Query: 46  MKCSWHPWERGVGVCASCLRERLLALTTEVQVAPSPELPS------------SMEFPRSV 189
           M+C  HP++ G GVCA+CLRERL  L      A SP  P+               FPRSV
Sbjct: 3   MRCKRHPFQAGGGVCATCLRERLFVLAAAQNDASSPTTPAPPPPAASAAAAGPPAFPRSV 62

Query: 190 SPYASR 207
           SPY SR
Sbjct: 63  SPYVSR 68


>gb|EEE57606.1| hypothetical protein OsJ_07987 [Oryza sativa Japonica Group]
          Length = 220

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/61 (47%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
 Frame = +1

Query: 46  MKCSWHPWERGVGVCASCLRERLLALTTEVQVAPS-------PELPSSMEFPRSVSPYAS 204
           M+C  HP++ G GVCA+CL +RLLAL      A S       P   ++  FPRSVSPY S
Sbjct: 3   MRCKKHPYQAGGGVCATCLNDRLLALAAAQNGASSSPPPPAAPPAAAAPAFPRSVSPYVS 62

Query: 205 R 207
           R
Sbjct: 63  R 63


>ref|XP_002448418.1| hypothetical protein SORBIDRAFT_06g026790 [Sorghum bicolor]
           gi|241939601|gb|EES12746.1| hypothetical protein
           SORBIDRAFT_06g026790 [Sorghum bicolor]
          Length = 296

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/63 (52%), Positives = 37/63 (58%), Gaps = 9/63 (14%)
 Frame = +1

Query: 46  MKCSWHPWERGVGVCASCLRERLLALTTEVQVA-------PSPELPS-SMEFPRSV-SPY 198
           M+C+ HP+E GVGVCA CLR+RLLAL      A       P PE P     FPRSV SPY
Sbjct: 1   MRCARHPYEGGVGVCAPCLRDRLLALAAAQNAASSLPPPLPPPEPPEPEPVFPRSVSSPY 60

Query: 199 ASR 207
             R
Sbjct: 61  VCR 63


Top