BLASTX nr result

ID: Zingiber23_contig00053991 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00053991
         (494 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]    89   5e-16
ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medica...    80   4e-13
ref|XP_002451896.1| hypothetical protein SORBIDRAFT_04g009491 [S...    69   6e-10
dbj|BAA06810.1| ORF74 [Oryza sativa Japonica Group]                    65   7e-09

>emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]
          Length = 280

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 45/60 (75%), Positives = 46/60 (76%), Gaps = 4/60 (6%)
 Frame = +3

Query: 9   LDSLFFCFSGDGEQCSLRSGRCPPVGPGLLPARKNRSLASRTSG----RGPDRHPTRQER 176
           LDS  FCFSG GEQCSLR GRCPPVGPGLLPARKNRSLASRTSG    R  + H  R ER
Sbjct: 52  LDSRIFCFSGGGEQCSLRCGRCPPVGPGLLPARKNRSLASRTSGGPIRRHTENHAFRTER 111


>ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477316|gb|AES58519.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 556

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 39/47 (82%), Positives = 41/47 (87%)
 Frame = -2

Query: 151 SGPLPLVRLASERFFRAGSRPGPTGGHLPLRKLHCSPSPEKQKKRES 11
           +GP PLVRLASERFFRA S PGPTGGHLP RKLHCSP P+KQK RES
Sbjct: 272 NGP-PLVRLASERFFRARSGPGPTGGHLPQRKLHCSPPPDKQKIRES 317


>ref|XP_002451896.1| hypothetical protein SORBIDRAFT_04g009491 [Sorghum bicolor]
           gi|241931727|gb|EES04872.1| hypothetical protein
           SORBIDRAFT_04g009491 [Sorghum bicolor]
          Length = 289

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 30/35 (85%), Positives = 31/35 (88%)
 Frame = +3

Query: 6   RLDSLFFCFSGDGEQCSLRSGRCPPVGPGLLPARK 110
           RLDS  FCFSG GEQCSLR GRCPPVGPGLLPAR+
Sbjct: 244 RLDSRIFCFSGGGEQCSLRCGRCPPVGPGLLPARR 278


>dbj|BAA06810.1| ORF74 [Oryza sativa Japonica Group]
          Length = 74

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 36/46 (78%), Positives = 38/46 (82%)
 Frame = -1

Query: 143 PTTSPAS**AVLSGGKQAGPYGRASPATQAALFAITREAKEKRVKA 6
           PTTSPAS   +LSG KQAGP GRASPATQAA FA TREAK+ RVKA
Sbjct: 25  PTTSPAS---LLSGRKQAGPDGRASPATQAAWFATTREAKDSRVKA 67


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