BLASTX nr result
ID: Zingiber23_contig00053927
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00053927
(311 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like... 68 1e-09
emb|CBI39502.3| unnamed protein product [Vitis vinifera] 68 1e-09
gb|EMS53289.1| ATP-dependent DNA helicase Q-like SIM [Triticum u... 64 2e-08
ref|XP_004302399.1| PREDICTED: ATP-dependent DNA helicase Q-like... 62 6e-08
gb|EMT00592.1| Bloom syndrome protein-like protein [Aegilops tau... 62 8e-08
gb|EOY11486.1| Lysyl-tRNA synthetase 1, putative isoform 2 [Theo... 59 5e-07
gb|EOY11485.1| Lysyl-tRNA synthetase 1, putative isoform 1 [Theo... 59 5e-07
ref|XP_003568921.1| PREDICTED: ATP-dependent DNA helicase Q-like... 58 1e-06
ref|XP_006433399.1| hypothetical protein CICLE_v10000234mg [Citr... 57 3e-06
gb|EXC01675.1| ATP-dependent DNA helicase Q-like SIM [Morus nota... 56 4e-06
ref|XP_006654055.1| PREDICTED: ATP-dependent DNA helicase Q-like... 56 6e-06
gb|EMJ09621.1| hypothetical protein PRUPE_ppa000740mg [Prunus pe... 56 6e-06
ref|XP_006382492.1| hypothetical protein POPTR_0005s02650g [Popu... 55 1e-05
ref|XP_002330211.1| predicted protein [Populus trichocarpa] 55 1e-05
>ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Vitis
vinifera]
Length = 893
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/50 (62%), Positives = 41/50 (82%)
Frame = -1
Query: 224 MDGGEVSADYIIAKLIDMGFEFSKASEAVELVGPSLDRAVEFILSGSSKS 75
MDG V +D +IA+LI+MGFEFS +EA+E+VGPSLD A+EFIL+G +S
Sbjct: 1 MDGNNVHSDQVIAELIEMGFEFSAVTEAIEVVGPSLDDAIEFILNGPHRS 50
>emb|CBI39502.3| unnamed protein product [Vitis vinifera]
Length = 1537
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/50 (62%), Positives = 41/50 (82%)
Frame = -1
Query: 224 MDGGEVSADYIIAKLIDMGFEFSKASEAVELVGPSLDRAVEFILSGSSKS 75
MDG V +D +IA+LI+MGFEFS +EA+E+VGPSLD A+EFIL+G +S
Sbjct: 1 MDGNNVHSDQVIAELIEMGFEFSAVTEAIEVVGPSLDDAIEFILNGPHRS 50
>gb|EMS53289.1| ATP-dependent DNA helicase Q-like SIM [Triticum urartu]
Length = 733
Score = 63.9 bits (154), Expect = 2e-08
Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Frame = -1
Query: 269 LLRSQNIVSKLLNYDMDGGEVSADYIIAKLIDMGFEFSKASEAVELVGPSLDRAVEFILS 90
LL N + +++ + G +VSAD++IA+L++MGFEF K SEA+ +VGP VEF+L+
Sbjct: 191 LLFFSNSLVLIMDANSAGTDVSADHVIAELLEMGFEFDKISEAIGVVGPCRADVVEFVLN 250
Query: 89 GSSKSDNK--GNLQALSSSRS 33
GS K G Q SS RS
Sbjct: 251 GSGSVQRKPGGGSQRSSSDRS 271
>ref|XP_004302399.1| PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Fragaria
vesca subsp. vesca]
Length = 893
Score = 62.4 bits (150), Expect = 6e-08
Identities = 30/66 (45%), Positives = 47/66 (71%)
Frame = -1
Query: 230 YDMDGGEVSADYIIAKLIDMGFEFSKASEAVELVGPSLDRAVEFILSGSSKSDNKGNLQA 51
++M+G VS D +IAKL++MGFE S EAV+ VGPS D A+EFIL+G +S+ + + +
Sbjct: 2 HNMNGNGVSGDEVIAKLLEMGFENSSVVEAVKEVGPSFDVALEFILNGCCRSNQRASSSS 61
Query: 50 LSSSRS 33
S +++
Sbjct: 62 TSKAKA 67
>gb|EMT00592.1| Bloom syndrome protein-like protein [Aegilops tauschii]
Length = 529
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Frame = -1
Query: 218 GGEVSADYIIAKLIDMGFEFSKASEAVELVGPSLDRAVEFILSGSSKSDNK--GNLQALS 45
G +VSAD++IA+L++MGFEF K SEA+ +VGP VEF+L+GS K G Q S
Sbjct: 7 GTDVSADHVIAELLEMGFEFDKISEAIGVVGPCRADVVEFVLNGSGSVQRKPGGGSQRRS 66
Query: 44 SSRS 33
S RS
Sbjct: 67 SDRS 70
>gb|EOY11486.1| Lysyl-tRNA synthetase 1, putative isoform 2 [Theobroma cacao]
Length = 852
Score = 59.3 bits (142), Expect = 5e-07
Identities = 28/64 (43%), Positives = 44/64 (68%)
Frame = -1
Query: 224 MDGGEVSADYIIAKLIDMGFEFSKASEAVELVGPSLDRAVEFILSGSSKSDNKGNLQALS 45
M G + +D ++ KLI+MGFE S A EAV+ VGPS+D AVE++L+G ++ + + +
Sbjct: 1 MGGNDAPSDQVVQKLIEMGFENSDAIEAVKAVGPSVDDAVEYVLNGCRRNSHSTSTSSQC 60
Query: 44 SSRS 33
SSR+
Sbjct: 61 SSRN 64
>gb|EOY11485.1| Lysyl-tRNA synthetase 1, putative isoform 1 [Theobroma cacao]
Length = 880
Score = 59.3 bits (142), Expect = 5e-07
Identities = 28/64 (43%), Positives = 44/64 (68%)
Frame = -1
Query: 224 MDGGEVSADYIIAKLIDMGFEFSKASEAVELVGPSLDRAVEFILSGSSKSDNKGNLQALS 45
M G + +D ++ KLI+MGFE S A EAV+ VGPS+D AVE++L+G ++ + + +
Sbjct: 1 MGGNDAPSDQVVQKLIEMGFENSDAIEAVKAVGPSVDDAVEYVLNGCRRNSHSTSTSSQC 60
Query: 44 SSRS 33
SSR+
Sbjct: 61 SSRN 64
>ref|XP_003568921.1| PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Brachypodium
distachyon]
Length = 865
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/57 (45%), Positives = 39/57 (68%)
Frame = -1
Query: 236 LNYDMDGGEVSADYIIAKLIDMGFEFSKASEAVELVGPSLDRAVEFILSGSSKSDNK 66
+ D +VSAD++IA+L++MGF+F K SEA+ +VGP+ VEF+L+GS K
Sbjct: 1 MEVDAVSSDVSADHVIAELLEMGFDFDKISEAIGVVGPNRADVVEFVLNGSGSGQRK 57
>ref|XP_006433399.1| hypothetical protein CICLE_v10000234mg [Citrus clementina]
gi|568836077|ref|XP_006472075.1| PREDICTED:
ATP-dependent DNA helicase Q-like SIM-like isoform X1
[Citrus sinensis] gi|557535521|gb|ESR46639.1|
hypothetical protein CICLE_v10000234mg [Citrus
clementina]
Length = 877
Score = 57.0 bits (136), Expect = 3e-06
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = -1
Query: 224 MDGGEVSADYIIAKLIDMGFEFSKASEAVELVGPSLDRAVEFILSGSSKSDNKGNLQALS 45
M G S D +IAKLI+MGF+ S +EAVE VGPS + A+E+IL+GS + ++KG + S
Sbjct: 1 MSGSGTSRDEVIAKLIEMGFDDSDITEAVETVGPSFNDAIEYILNGSVR-NSKGKSVSWS 59
Query: 44 S 42
S
Sbjct: 60 S 60
>gb|EXC01675.1| ATP-dependent DNA helicase Q-like SIM [Morus notabilis]
Length = 857
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/61 (42%), Positives = 46/61 (75%)
Frame = -1
Query: 209 VSADYIIAKLIDMGFEFSKASEAVELVGPSLDRAVEFILSGSSKSDNKGNLQALSSSRSQ 30
+S+ +IAKL +MGFE S A EAV++VGPS+D AVE++L+G ++++ ++S++ ++
Sbjct: 7 ISSKQVIAKLTEMGFENSNAVEAVKVVGPSVDDAVEYMLNGCRRNNHTATSSSISTNPAK 66
Query: 29 I 27
I
Sbjct: 67 I 67
>ref|XP_006654055.1| PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Oryza
brachyantha]
Length = 855
Score = 55.8 bits (133), Expect = 6e-06
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 12/75 (16%)
Frame = -1
Query: 215 GEVSADYIIAKLIDMGFEFSKASEAVELVGPSLDRAVEFILSGSSKSDNK---------- 66
G+VSAD +IA+L+DMGFEF K S+A+ +VGP +EF+LS S K
Sbjct: 8 GDVSADRVIAELLDMGFEFDKISQAIGVVGPRRADVLEFVLSDSGNGRRKPSRESQGRHS 67
Query: 65 --GNLQALSSSRSQI 27
N +A SS R +
Sbjct: 68 VSSNAEACSSGRHSV 82
>gb|EMJ09621.1| hypothetical protein PRUPE_ppa000740mg [Prunus persica]
Length = 1017
Score = 55.8 bits (133), Expect = 6e-06
Identities = 28/64 (43%), Positives = 43/64 (67%)
Frame = -1
Query: 224 MDGGEVSADYIIAKLIDMGFEFSKASEAVELVGPSLDRAVEFILSGSSKSDNKGNLQALS 45
M+ VSAD +IAKL++MGFE S +AV+ VGPS D A+++IL+G ++ + + +
Sbjct: 1 MNANGVSADEVIAKLLEMGFENSTVKKAVKEVGPSFDDALDYILNGCCSTNRRATRASST 60
Query: 44 SSRS 33
SS S
Sbjct: 61 SSSS 64
>ref|XP_006382492.1| hypothetical protein POPTR_0005s02650g [Populus trichocarpa]
gi|550337853|gb|ERP60289.1| hypothetical protein
POPTR_0005s02650g [Populus trichocarpa]
Length = 1048
Score = 55.1 bits (131), Expect = 1e-05
Identities = 28/57 (49%), Positives = 41/57 (71%)
Frame = -1
Query: 209 VSADYIIAKLIDMGFEFSKASEAVELVGPSLDRAVEFILSGSSKSDNKGNLQALSSS 39
V+ D + KLI+MGFE A +AV+ VGPSLD+AV+++L+GSS + +G+ SSS
Sbjct: 5 VACDGTVEKLIEMGFESCAAEQAVKEVGPSLDKAVDYLLNGSSSRNCEGSGAMTSSS 61
>ref|XP_002330211.1| predicted protein [Populus trichocarpa]
Length = 1048
Score = 55.1 bits (131), Expect = 1e-05
Identities = 28/57 (49%), Positives = 41/57 (71%)
Frame = -1
Query: 209 VSADYIIAKLIDMGFEFSKASEAVELVGPSLDRAVEFILSGSSKSDNKGNLQALSSS 39
V+ D + KLI+MGFE A +AV+ VGPSLD+AV+++L+GSS + +G+ SSS
Sbjct: 5 VACDGTVEKLIEMGFESCAAEQAVKEVGPSLDKAVDYLLNGSSSRNCEGSGAMTSSS 61