BLASTX nr result
ID: Zingiber23_contig00053846
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00053846
(195 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001065883.1| Os11g0176100 [Oryza sativa Japonica Group] g... 74 2e-11
gb|EEC67777.1| hypothetical protein OsI_35315 [Oryza sativa Indi... 74 2e-11
ref|XP_006663254.1| PREDICTED: cleavage stimulation factor subun... 71 1e-10
ref|XP_003577798.1| PREDICTED: uncharacterized protein LOC100840... 71 2e-10
ref|XP_002302149.1| cleavage stimulation factor family protein [... 70 2e-10
ref|XP_002264617.2| PREDICTED: uncharacterized protein LOC100256... 70 3e-10
ref|XP_004978839.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 70 4e-10
gb|EMJ01495.1| hypothetical protein PRUPE_ppa004010mg [Prunus pe... 68 1e-09
ref|XP_004290457.1| PREDICTED: uncharacterized protein LOC101301... 67 3e-09
ref|NP_001140273.1| uncharacterized protein LOC100272317 [Zea ma... 66 6e-09
gb|EOY17424.1| Cleavage stimulation factor 64 kDa subunit, putat... 65 7e-09
gb|EMT19347.1| Cleavage stimulation factor 64 kDa subunit [Aegil... 65 9e-09
gb|EMS55090.1| Cleavage stimulation factor subunit 2 [Triticum u... 65 9e-09
ref|XP_002527116.1| mRNA splicing factor, putative [Ricinus comm... 65 9e-09
ref|XP_006349660.1| PREDICTED: cleavage stimulation factor subun... 64 2e-08
ref|XP_006473161.1| PREDICTED: bromodomain-containing protein DD... 64 2e-08
ref|XP_006434570.1| hypothetical protein CICLE_v10000749mg [Citr... 64 2e-08
gb|ESW15599.1| hypothetical protein PHAVU_007G085700g [Phaseolus... 62 6e-08
dbj|BAJ94519.1| predicted protein [Hordeum vulgare subsp. vulgare] 62 6e-08
ref|NP_001159130.1| hypothetical protein [Zea mays] gi|223942157... 62 6e-08
>ref|NP_001065883.1| Os11g0176100 [Oryza sativa Japonica Group]
gi|62733690|gb|AAX95801.1| RNA recognition motif.
(a.k.a. RRM, RBD, or RNP domain), putative [Oryza sativa
Japonica Group] gi|77548917|gb|ABA91714.1| RNA
recognition motif family protein, expressed [Oryza
sativa Japonica Group] gi|113644587|dbj|BAF27728.1|
Os11g0176100 [Oryza sativa Japonica Group]
gi|215695427|dbj|BAG90666.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222615613|gb|EEE51745.1| hypothetical protein
OsJ_33161 [Oryza sativa Japonica Group]
Length = 495
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/52 (67%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Frame = +3
Query: 3 RVDFAENDKNADRNREQGRGGPGLASRADVQKQPSGAPNLVDP-LHQPIGFP 155
RVDFAEN +NADRNRE+GRGGPG+AS D QKQ +G P + D LHQP+G P
Sbjct: 84 RVDFAENGRNADRNREKGRGGPGMASSVDTQKQLAGTPVVGDTGLHQPVGLP 135
>gb|EEC67777.1| hypothetical protein OsI_35315 [Oryza sativa Indica Group]
Length = 495
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/52 (67%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Frame = +3
Query: 3 RVDFAENDKNADRNREQGRGGPGLASRADVQKQPSGAPNLVDP-LHQPIGFP 155
RVDFAEN +NADRNRE+GRGGPG+AS D QKQ +G P + D LHQP+G P
Sbjct: 84 RVDFAENGRNADRNREKGRGGPGMASSVDTQKQLAGTPVVGDTGLHQPVGLP 135
>ref|XP_006663254.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Oryza brachyantha]
Length = 471
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/52 (65%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Frame = +3
Query: 3 RVDFAENDKNADRNREQGRGGPGLASRADVQKQPSGAPNLVD-PLHQPIGFP 155
RVDFAEN +NADRNRE+GRGGPG+AS D QKQ +G+ + D LHQP+G P
Sbjct: 83 RVDFAENGRNADRNREKGRGGPGMASSVDAQKQLAGSSVVGDTSLHQPVGLP 134
>ref|XP_003577798.1| PREDICTED: uncharacterized protein LOC100840159 [Brachypodium
distachyon]
Length = 477
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/52 (63%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Frame = +3
Query: 3 RVDFAENDKNADRNREQGRGGPGLASRADVQKQPSGAPNLVD-PLHQPIGFP 155
RVDFAEN +N DRNRE+GRGGPG+AS D KQP+ P + D LHQP+G P
Sbjct: 83 RVDFAENGRNTDRNREKGRGGPGMASCVDAPKQPTATPVVGDTSLHQPVGLP 134
>ref|XP_002302149.1| cleavage stimulation factor family protein [Populus trichocarpa]
gi|222843875|gb|EEE81422.1| cleavage stimulation factor
family protein [Populus trichocarpa]
Length = 561
Score = 70.5 bits (171), Expect = 2e-10
Identities = 36/50 (72%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Frame = +3
Query: 3 RVDFAENDKNADRNREQGRGGPGLASRADVQKQPSGAPNLVDPL-HQPIG 149
RVDFAENDKNADRNREQGRGGP LA+ D QKQ G L +P HQPIG
Sbjct: 95 RVDFAENDKNADRNREQGRGGPRLAANNDPQKQAGGPAILEEPAQHQPIG 144
>ref|XP_002264617.2| PREDICTED: uncharacterized protein LOC100256296 [Vitis vinifera]
gi|297739347|emb|CBI29337.3| unnamed protein product
[Vitis vinifera]
Length = 562
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/52 (65%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +3
Query: 3 RVDFAENDKNADRNREQGRGGPGLASRADVQKQPSGAPNLVD-PLHQPIGFP 155
RVDFAENDK ADRNREQGRGGPG+ + + QKQ G L D LHQP+G P
Sbjct: 79 RVDFAENDKGADRNREQGRGGPGMVANVEPQKQVGGPAILGDAALHQPVGLP 130
>ref|XP_004978839.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and termination factor
1-like [Setaria italica]
Length = 498
Score = 69.7 bits (169), Expect = 4e-10
Identities = 34/52 (65%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Frame = +3
Query: 3 RVDFAENDKNADRNREQGRGGPGLASRADVQKQPSGAPNLVD-PLHQPIGFP 155
RVDFAEN +N DRNRE+GRGGPG+AS AD QKQ G + D LHQP+G P
Sbjct: 83 RVDFAENGRNTDRNREKGRGGPGMASGADGQKQSGGTSVVGDTSLHQPVGLP 134
>gb|EMJ01495.1| hypothetical protein PRUPE_ppa004010mg [Prunus persica]
Length = 535
Score = 67.8 bits (164), Expect = 1e-09
Identities = 35/50 (70%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +3
Query: 3 RVDFAENDKNADRNREQGRGGPGLASRADVQKQPSGAPNLVDPL-HQPIG 149
RVDFAENDK ADRNREQGRGGPGL + D QKQ G V+ L HQPIG
Sbjct: 79 RVDFAENDKGADRNREQGRGGPGLTANVDPQKQVVGPSVHVEALQHQPIG 128
>ref|XP_004290457.1| PREDICTED: uncharacterized protein LOC101301257 [Fragaria vesca
subsp. vesca]
Length = 538
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/50 (66%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = +3
Query: 3 RVDFAENDKNADRNREQGRGGPGLASRADVQKQPSGAPNLVDPLH-QPIG 149
RVDFAENDK D+NREQGRGGPG+ + D QKQ G DPLH QPIG
Sbjct: 80 RVDFAENDKGTDKNREQGRGGPGVTTNVDPQKQVGGPAVHGDPLHNQPIG 129
>ref|NP_001140273.1| uncharacterized protein LOC100272317 [Zea mays]
gi|194698788|gb|ACF83478.1| unknown [Zea mays]
gi|414588427|tpg|DAA38998.1| TPA: hypothetical protein
ZEAMMB73_344937 [Zea mays]
Length = 491
Score = 65.9 bits (159), Expect = 6e-09
Identities = 31/52 (59%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +3
Query: 3 RVDFAENDKNADRNREQGRGGPGLASRADVQKQPSGAPNLVDP-LHQPIGFP 155
RVDFAEN +N DRNRE+GRGGPG+ S D QKQ +G + + LHQP+G P
Sbjct: 83 RVDFAENGRNTDRNREKGRGGPGMTSNVDSQKQLAGTSVVGEANLHQPVGLP 134
>gb|EOY17424.1| Cleavage stimulation factor 64 kDa subunit, putative [Theobroma
cacao]
Length = 521
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/50 (66%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +3
Query: 3 RVDFAENDKNADRNREQGRGGPGLASRADVQKQPSGAPNLVDPLH-QPIG 149
RVDFAENDK +DRNREQGRGGPGLA+ D QKQ G + +H QPIG
Sbjct: 79 RVDFAENDKGSDRNREQGRGGPGLATNVDPQKQVGGPAVRGESVHQQPIG 128
>gb|EMT19347.1| Cleavage stimulation factor 64 kDa subunit [Aegilops tauschii]
Length = 502
Score = 65.1 bits (157), Expect = 9e-09
Identities = 32/52 (61%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +3
Query: 3 RVDFAENDKNADRNREQGRGGPGLASRADVQKQPSGAPNLVD-PLHQPIGFP 155
RVDFAEN +N DRNRE+GRGGPG++S D QKQ + P + D LHQ IG P
Sbjct: 108 RVDFAENGRNTDRNREKGRGGPGMSSTVDAQKQLTTTPAVGDTSLHQLIGLP 159
>gb|EMS55090.1| Cleavage stimulation factor subunit 2 [Triticum urartu]
Length = 471
Score = 65.1 bits (157), Expect = 9e-09
Identities = 32/52 (61%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +3
Query: 3 RVDFAENDKNADRNREQGRGGPGLASRADVQKQPSGAPNLVD-PLHQPIGFP 155
RVDFAEN +N DRNRE+GRGGPG++S D QKQ + P + D LHQ IG P
Sbjct: 120 RVDFAENGRNTDRNREKGRGGPGMSSTVDAQKQLTTTPAVGDTSLHQLIGLP 171
>ref|XP_002527116.1| mRNA splicing factor, putative [Ricinus communis]
gi|223533539|gb|EEF35279.1| mRNA splicing factor,
putative [Ricinus communis]
Length = 509
Score = 65.1 bits (157), Expect = 9e-09
Identities = 36/50 (72%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Frame = +3
Query: 3 RVDFAENDKNADRNREQGRGGPGLASRADVQKQPSGAPNLVDPL-HQPIG 149
RVDFAENDKNADRNREQGRGGPGLA+ D QKQ G L + HQPIG
Sbjct: 80 RVDFAENDKNADRNREQGRGGPGLAN-IDPQKQIGGPAILGESAQHQPIG 128
>ref|XP_006349660.1| PREDICTED: cleavage stimulation factor subunit 2-like [Solanum
tuberosum]
Length = 509
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/50 (64%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +3
Query: 3 RVDFAENDKNADRNREQGRGGPGLASRADVQKQPSGAPNLVD-PLHQPIG 149
RVDFAENDKN+DRNREQGRGGPG+ + AD +K G VD L QP+G
Sbjct: 81 RVDFAENDKNSDRNREQGRGGPGMVANADPKKHIGGPAVPVDSALQQPLG 130
>ref|XP_006473161.1| PREDICTED: bromodomain-containing protein DDB_G0280777-like [Citrus
sinensis]
Length = 553
Score = 63.9 bits (154), Expect = 2e-08
Identities = 34/50 (68%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +3
Query: 3 RVDFAENDKNADRNREQGRGGPGLASRADVQKQPSG-APNLVDPLHQPIG 149
RVDFAENDK ADRNREQGRGGPG+A+ D QKQ G A + HQPIG
Sbjct: 79 RVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQPIG 128
>ref|XP_006434570.1| hypothetical protein CICLE_v10000749mg [Citrus clementina]
gi|557536692|gb|ESR47810.1| hypothetical protein
CICLE_v10000749mg [Citrus clementina]
Length = 553
Score = 63.9 bits (154), Expect = 2e-08
Identities = 34/50 (68%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +3
Query: 3 RVDFAENDKNADRNREQGRGGPGLASRADVQKQPSG-APNLVDPLHQPIG 149
RVDFAENDK ADRNREQGRGGPG+A+ D QKQ G A + HQPIG
Sbjct: 79 RVDFAENDKGADRNREQGRGGPGMAAIVDPQKQLGGPAIHGESVHHQPIG 128
>gb|ESW15599.1| hypothetical protein PHAVU_007G085700g [Phaseolus vulgaris]
Length = 539
Score = 62.4 bits (150), Expect = 6e-08
Identities = 32/50 (64%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +3
Query: 3 RVDFAENDKNADRNREQGRGGPGLASRADVQKQPSG-APNLVDPLHQPIG 149
RVDFAENDK DRNREQGRGGPG+ + D QKQ G A + HQPIG
Sbjct: 81 RVDFAENDKGTDRNREQGRGGPGMTTNVDPQKQVGGPAVHGEAVQHQPIG 130
>dbj|BAJ94519.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 62.4 bits (150), Expect = 6e-08
Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +3
Query: 3 RVDFAENDKNADRNREQGRGGPGLASRADVQKQPSGAPNLVD-PLHQPIGFP 155
RVDFAEN +N D+NRE+GRGGPG++S D QKQ + P + + LHQ IG P
Sbjct: 83 RVDFAENGRNTDKNREKGRGGPGMSSSVDAQKQLTTTPAVGETSLHQLIGLP 134
>ref|NP_001159130.1| hypothetical protein [Zea mays] gi|223942157|gb|ACN25162.1| unknown
[Zea mays] gi|413925479|gb|AFW65411.1| hypothetical
protein ZEAMMB73_461561 [Zea mays]
Length = 499
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +3
Query: 3 RVDFAENDKNADRNREQGRGGPGLASRADVQKQPSGAPNLVDP-LHQPIGFP 155
RVDFAE+ +N DRNRE+GRGGPG+AS D QK+ +G + + HQP+G P
Sbjct: 83 RVDFAESGRNTDRNREKGRGGPGMASNVDSQKRLAGTSVVGETNFHQPVGLP 134