BLASTX nr result

ID: Zingiber23_contig00053844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00053844
         (299 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004965016.1| PREDICTED: uncharacterized protein LOC101784...    80   2e-13
ref|XP_004965015.1| PREDICTED: uncharacterized protein LOC101784...    79   5e-13
ref|XP_004966806.1| PREDICTED: uncharacterized protein LOC101784...    79   8e-13
ref|XP_006827076.1| hypothetical protein AMTR_s00010p00237160 [A...    78   1e-12
gb|ACM17534.1| mitochondrial transcription termination factor-li...    78   1e-12
ref|XP_006362784.1| PREDICTED: uncharacterized protein LOC102590...    77   2e-12
ref|XP_004965017.1| PREDICTED: uncharacterized protein LOC101785...    77   2e-12
ref|XP_004964982.1| PREDICTED: uncharacterized protein LOC101774...    77   2e-12
gb|ACM17535.1| mitochondrial transcription termination factor-li...    77   3e-12
gb|ACG24523.1| mTERF family protein [Zea mays] gi|414873674|tpg|...    76   4e-12
ref|NP_001136974.1| uncharacterized protein LOC100217134 [Zea ma...    76   4e-12
ref|XP_006827077.1| hypothetical protein AMTR_s00010p00237380 [A...    75   7e-12
ref|NP_001057191.2| Os06g0224700 [Oryza sativa Japonica Group] g...    75   7e-12
ref|XP_002463602.1| hypothetical protein SORBIDRAFT_01g002730 [S...    75   7e-12
gb|EAZ00219.1| hypothetical protein OsI_22222 [Oryza sativa Indi...    75   7e-12
ref|XP_002460105.1| hypothetical protein SORBIDRAFT_02g022840 [S...    75   9e-12
ref|XP_002463622.1| hypothetical protein SORBIDRAFT_01g003050 [S...    75   9e-12
dbj|BAJ92613.1| predicted protein [Hordeum vulgare subsp. vulgar...    74   2e-11
ref|XP_002466190.1| hypothetical protein SORBIDRAFT_01g003180 [S...    74   2e-11
ref|XP_006827175.1| hypothetical protein AMTR_s00010p00255890 [A...    74   2e-11

>ref|XP_004965016.1| PREDICTED: uncharacterized protein LOC101784975 isoform X1 [Setaria
           italica]
          Length = 393

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 38/74 (51%), Positives = 57/74 (77%)
 Frame = +3

Query: 9   LGWSESDFLTAIRKKPTLLNISQPNMRRKIEFFIKEVGYQPSFVVQQPLLLLFSLEKRVI 188
           LG SESD  TA+ K P++L+IS+ N+ RKIEF + EVG +P +++++ +LL +SLEKR++
Sbjct: 269 LGGSESDVYTAMSKMPSILSISEENITRKIEFLVNEVGMEPQYILERIVLLGYSLEKRLL 328

Query: 189 PRFRVMELLKSKKL 230
           PR RVM+ L +K L
Sbjct: 329 PRHRVMQALHAKGL 342


>ref|XP_004965015.1| PREDICTED: uncharacterized protein LOC101784574 [Setaria italica]
          Length = 387

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 35/74 (47%), Positives = 55/74 (74%)
 Frame = +3

Query: 3   SGLGWSESDFLTAIRKKPTLLNISQPNMRRKIEFFIKEVGYQPSFVVQQPLLLLFSLEKR 182
           S LG  ES+  TA+ K PT+L IS+ ++ RKI+F + EVG +P +++Q+P L  +SLEKR
Sbjct: 271 STLGCHESEIATAVSKMPTILGISEQSLHRKIQFLVNEVGLEPQYILQRPALFTYSLEKR 330

Query: 183 VIPRFRVMELLKSK 224
           ++PR  VM++L++K
Sbjct: 331 LVPRHCVMKVLQAK 344


>ref|XP_004966806.1| PREDICTED: uncharacterized protein LOC101784455 [Setaria italica]
          Length = 405

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 36/76 (47%), Positives = 55/76 (72%)
 Frame = +3

Query: 3   SGLGWSESDFLTAIRKKPTLLNISQPNMRRKIEFFIKEVGYQPSFVVQQPLLLLFSLEKR 182
           S LG  ES+  TA+ K P++L IS+ ++ RKI F I EVG +P +++Q+P L  +SLEKR
Sbjct: 281 STLGCHESEIATAVSKMPSILTISEESLHRKIRFLINEVGLEPQYILQRPALFAYSLEKR 340

Query: 183 VIPRFRVMELLKSKKL 230
           ++PR+ VM++L +K L
Sbjct: 341 LVPRYCVMKVLLAKGL 356


>ref|XP_006827076.1| hypothetical protein AMTR_s00010p00237160 [Amborella trichopoda]
           gi|548831505|gb|ERM94313.1| hypothetical protein
           AMTR_s00010p00237160 [Amborella trichopoda]
          Length = 401

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 35/78 (44%), Positives = 53/78 (67%)
 Frame = +3

Query: 12  GWSESDFLTAIRKKPTLLNISQPNMRRKIEFFIKEVGYQPSFVVQQPLLLLFSLEKRVIP 191
           GWSE+D  +A R+ P LL++S   +R+ +++F KE+ +   F++ +P L  FSLE RVIP
Sbjct: 281 GWSENDVFSAFRRNPHLLSLSTKKLRKGMDYFTKEMKFDKPFLIARPKLFFFSLEGRVIP 340

Query: 192 RFRVMELLKSKKLWTKQI 245
           R +VME L+SK L  K +
Sbjct: 341 RLKVMEALRSKNLLEKDV 358


>gb|ACM17534.1| mitochondrial transcription termination factor-like family-1 [Oryza
           australiensis]
          Length = 409

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 37/77 (48%), Positives = 54/77 (70%)
 Frame = +3

Query: 9   LGWSESDFLTAIRKKPTLLNISQPNMRRKIEFFIKEVGYQPSFVVQQPLLLLFSLEKRVI 188
           LG S    L A+ KKPT+L +S  N+RRKIEF + +VG +   +V+ P++L +SLEKRV+
Sbjct: 264 LGCSMDKILVAVGKKPTILGLSMENLRRKIEFLVTKVGLKTQCIVECPVILCYSLEKRVV 323

Query: 189 PRFRVMELLKSKKLWTK 239
           PR  VME+L+++ L  K
Sbjct: 324 PRHSVMEILQARGLMKK 340


>ref|XP_006362784.1| PREDICTED: uncharacterized protein LOC102590065 [Solanum tuberosum]
          Length = 369

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 32/76 (42%), Positives = 55/76 (72%)
 Frame = +3

Query: 12  GWSESDFLTAIRKKPTLLNISQPNMRRKIEFFIKEVGYQPSFVVQQPLLLLFSLEKRVIP 191
           GWS+SD +T +++ P  L  S+  +R  ++FF++E+ Y+ S+V + P L++FSLEKRV+P
Sbjct: 255 GWSDSDIITMVQRLPLCLTTSEVKLRNVLKFFMEELRYESSYVARHPTLIMFSLEKRVLP 314

Query: 192 RFRVMELLKSKKLWTK 239
           R ++ +LLK K++  K
Sbjct: 315 RIKIWQLLKEKQVIKK 330


>ref|XP_004965017.1| PREDICTED: uncharacterized protein LOC101785775 [Setaria italica]
          Length = 398

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 35/74 (47%), Positives = 56/74 (75%)
 Frame = +3

Query: 9   LGWSESDFLTAIRKKPTLLNISQPNMRRKIEFFIKEVGYQPSFVVQQPLLLLFSLEKRVI 188
           LG SE++   A+ K PT+L IS  N+ RKIEF + EVG +P +++++P+LL +SL+KR++
Sbjct: 272 LGCSEAEVSVAMSKVPTILGISDENLTRKIEFLVNEVGMEPQYILERPILLGYSLKKRLL 331

Query: 189 PRFRVMELLKSKKL 230
           PR RV++ L++K L
Sbjct: 332 PRHRVVKALQAKGL 345


>ref|XP_004964982.1| PREDICTED: uncharacterized protein LOC101774315 isoform X1 [Setaria
           italica] gi|514762239|ref|XP_004964983.1| PREDICTED:
           uncharacterized protein LOC101774315 isoform X2 [Setaria
           italica] gi|514762243|ref|XP_004964984.1| PREDICTED:
           uncharacterized protein LOC101774315 isoform X3 [Setaria
           italica] gi|514762247|ref|XP_004964985.1| PREDICTED:
           uncharacterized protein LOC101774315 isoform X4 [Setaria
           italica]
          Length = 397

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 36/76 (47%), Positives = 55/76 (72%)
 Frame = +3

Query: 3   SGLGWSESDFLTAIRKKPTLLNISQPNMRRKIEFFIKEVGYQPSFVVQQPLLLLFSLEKR 182
           S LG  ES+  TA+ K P++L IS+ ++ RKI F I EVG +P +++Q+P L  +SLEKR
Sbjct: 273 STLGCHESEIATAVSKMPSILTISEESLHRKIRFLINEVGLEPQYILQRPALFGYSLEKR 332

Query: 183 VIPRFRVMELLKSKKL 230
           ++PR+ VM++L +K L
Sbjct: 333 LVPRYCVMKVLLAKGL 348


>gb|ACM17535.1| mitochondrial transcription termination factor-like family-2 [Oryza
           australiensis]
          Length = 409

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 36/77 (46%), Positives = 53/77 (68%)
 Frame = +3

Query: 9   LGWSESDFLTAIRKKPTLLNISQPNMRRKIEFFIKEVGYQPSFVVQQPLLLLFSLEKRVI 188
           LG S    L A+ K PT+L +S  N+RRKIEF + +VG +   +V+ P++L +SLEKRV+
Sbjct: 264 LGCSMDKILVAVGKMPTILGLSMENLRRKIEFLVTKVGLKTQCIVESPVILCYSLEKRVV 323

Query: 189 PRFRVMELLKSKKLWTK 239
           PR  VME+L+++ L  K
Sbjct: 324 PRHSVMEILQARGLMKK 340


>gb|ACG24523.1| mTERF family protein [Zea mays] gi|414873674|tpg|DAA52231.1| TPA:
           putative mitochondrial transcription termination factor
           family protein [Zea mays]
          Length = 400

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 34/74 (45%), Positives = 54/74 (72%)
 Frame = +3

Query: 9   LGWSESDFLTAIRKKPTLLNISQPNMRRKIEFFIKEVGYQPSFVVQQPLLLLFSLEKRVI 188
           LG SES+   A+ K P +L +S+  + RKIEF + E   +P +++Q+P+LL FSLEKR++
Sbjct: 278 LGCSESEVSNAVSKMPQILALSEATLLRKIEFLVNEGAIEPQYIMQRPILLAFSLEKRLV 337

Query: 189 PRFRVMELLKSKKL 230
           PR+RV+++L+ K L
Sbjct: 338 PRYRVIKVLQGKGL 351


>ref|NP_001136974.1| uncharacterized protein LOC100217134 [Zea mays]
           gi|194697822|gb|ACF82995.1| unknown [Zea mays]
          Length = 400

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 34/74 (45%), Positives = 54/74 (72%)
 Frame = +3

Query: 9   LGWSESDFLTAIRKKPTLLNISQPNMRRKIEFFIKEVGYQPSFVVQQPLLLLFSLEKRVI 188
           LG SES+   A+ K P +L +S+  + RKIEF + E   +P +++Q+P+LL FSLEKR++
Sbjct: 278 LGCSESEVSNAVSKTPQILALSEATLLRKIEFLVNEGAIEPQYIMQRPILLAFSLEKRLV 337

Query: 189 PRFRVMELLKSKKL 230
           PR+RV+++L+ K L
Sbjct: 338 PRYRVIKVLQGKGL 351


>ref|XP_006827077.1| hypothetical protein AMTR_s00010p00237380 [Amborella trichopoda]
           gi|548831506|gb|ERM94314.1| hypothetical protein
           AMTR_s00010p00237380 [Amborella trichopoda]
          Length = 396

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 36/78 (46%), Positives = 51/78 (65%)
 Frame = +3

Query: 12  GWSESDFLTAIRKKPTLLNISQPNMRRKIEFFIKEVGYQPSFVVQQPLLLLFSLEKRVIP 191
           GWSE D   A R+ P LL++S   +R+ +E+F  E+ +  SF+V +P LL FSLE RVIP
Sbjct: 276 GWSEDDIFAAFRRMPHLLSLSTKKLRKGMEYFTNEMKFDQSFLVARPKLLAFSLEGRVIP 335

Query: 192 RFRVMELLKSKKLWTKQI 245
           R +V+E L+ K L  K +
Sbjct: 336 RHKVVEALRLKNLLKKDV 353


>ref|NP_001057191.2| Os06g0224700 [Oryza sativa Japonica Group]
           gi|51536068|dbj|BAD38194.1| mitochondrial transcription
           termination factor-like [Oryza sativa Japonica Group]
           gi|125554610|gb|EAZ00216.1| hypothetical protein
           OsI_22220 [Oryza sativa Indica Group]
           gi|125596550|gb|EAZ36330.1| hypothetical protein
           OsJ_20654 [Oryza sativa Japonica Group]
           gi|255676844|dbj|BAF19105.2| Os06g0224700 [Oryza sativa
           Japonica Group]
          Length = 393

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 32/74 (43%), Positives = 55/74 (74%)
 Frame = +3

Query: 9   LGWSESDFLTAIRKKPTLLNISQPNMRRKIEFFIKEVGYQPSFVVQQPLLLLFSLEKRVI 188
           LG+S+ DFL  +R+ P +L +S   +RR +EF I++VG + S++ Q+P LL +SLE+R++
Sbjct: 266 LGFSQDDFLVIVRRAPQVLRLSDGRIRRSVEFLIRDVGLEQSYIAQRPTLLAYSLERRLL 325

Query: 189 PRFRVMELLKSKKL 230
           PR  ++++LK+K L
Sbjct: 326 PRHCLLKVLKAKGL 339


>ref|XP_002463602.1| hypothetical protein SORBIDRAFT_01g002730 [Sorghum bicolor]
           gi|241917456|gb|EER90600.1| hypothetical protein
           SORBIDRAFT_01g002730 [Sorghum bicolor]
          Length = 398

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 36/74 (48%), Positives = 52/74 (70%)
 Frame = +3

Query: 9   LGWSESDFLTAIRKKPTLLNISQPNMRRKIEFFIKEVGYQPSFVVQQPLLLLFSLEKRVI 188
           LG SES+  +A+ K P +L  S   + RKIEF + EVG +P ++VQ+P+LL  SLEKR++
Sbjct: 276 LGCSESEVSSAVSKMPAILGFSDEILLRKIEFLVNEVGVEPQYIVQRPVLLAMSLEKRLM 335

Query: 189 PRFRVMELLKSKKL 230
           PR  VM++L+ K L
Sbjct: 336 PRHYVMKVLREKGL 349


>gb|EAZ00219.1| hypothetical protein OsI_22222 [Oryza sativa Indica Group]
          Length = 394

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 32/74 (43%), Positives = 55/74 (74%)
 Frame = +3

Query: 9   LGWSESDFLTAIRKKPTLLNISQPNMRRKIEFFIKEVGYQPSFVVQQPLLLLFSLEKRVI 188
           LG+S+ DFL  +R+ P +L +S   +RR +EF I++VG + S++ Q+P LL +SLE+R++
Sbjct: 266 LGFSQDDFLVIVRRAPQVLRLSDGRIRRSVEFLIRDVGLEQSYIAQRPTLLAYSLERRLL 325

Query: 189 PRFRVMELLKSKKL 230
           PR  ++++LK+K L
Sbjct: 326 PRHCLLKVLKAKGL 339


>ref|XP_002460105.1| hypothetical protein SORBIDRAFT_02g022840 [Sorghum bicolor]
           gi|241923482|gb|EER96626.1| hypothetical protein
           SORBIDRAFT_02g022840 [Sorghum bicolor]
          Length = 394

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 38/76 (50%), Positives = 52/76 (68%)
 Frame = +3

Query: 3   SGLGWSESDFLTAIRKKPTLLNISQPNMRRKIEFFIKEVGYQPSFVVQQPLLLLFSLEKR 182
           S LG ++S+  TA+ KKPT+L IS   + RKI F I  VG  P  ++Q+P+LL FSLEKR
Sbjct: 272 SSLGCTKSEVATAVSKKPTILGISDEILLRKIHFLINVVGLDPQSILQRPILLTFSLEKR 331

Query: 183 VIPRFRVMELLKSKKL 230
           ++PR  VM+ L +K L
Sbjct: 332 LVPRHCVMKALLAKGL 347


>ref|XP_002463622.1| hypothetical protein SORBIDRAFT_01g003050 [Sorghum bicolor]
           gi|241917476|gb|EER90620.1| hypothetical protein
           SORBIDRAFT_01g003050 [Sorghum bicolor]
          Length = 395

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 34/74 (45%), Positives = 51/74 (68%)
 Frame = +3

Query: 9   LGWSESDFLTAIRKKPTLLNISQPNMRRKIEFFIKEVGYQPSFVVQQPLLLLFSLEKRVI 188
           LG SES+   A+ + P +L +S   + RKIEF + E   +P ++VQ+P+LL FSLEKR++
Sbjct: 273 LGCSESEVSIAVSRMPQILGLSDATLLRKIEFLVNEAAMEPQYIVQRPILLTFSLEKRLV 332

Query: 189 PRFRVMELLKSKKL 230
           PR  VM++L+ K L
Sbjct: 333 PRHHVMKVLQEKGL 346


>dbj|BAJ92613.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326531974|dbj|BAK01363.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 398

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 33/74 (44%), Positives = 53/74 (71%)
 Frame = +3

Query: 9   LGWSESDFLTAIRKKPTLLNISQPNMRRKIEFFIKEVGYQPSFVVQQPLLLLFSLEKRVI 188
           LGWS+ +   AI K P +L  S+  +RR  EF IKEVG +P ++ ++ +LL++SLE+R++
Sbjct: 275 LGWSKEEVSLAISKAPRILVASEERLRRNAEFLIKEVGLEPQYIARRSVLLMYSLERRLM 334

Query: 189 PRFRVMELLKSKKL 230
           PR  V++LLK ++L
Sbjct: 335 PRHLVVKLLKQRRL 348


>ref|XP_002466190.1| hypothetical protein SORBIDRAFT_01g003180 [Sorghum bicolor]
           gi|241920044|gb|EER93188.1| hypothetical protein
           SORBIDRAFT_01g003180 [Sorghum bicolor]
          Length = 390

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 33/74 (44%), Positives = 52/74 (70%)
 Frame = +3

Query: 9   LGWSESDFLTAIRKKPTLLNISQPNMRRKIEFFIKEVGYQPSFVVQQPLLLLFSLEKRVI 188
           LG SES+  TA+ K P ++ +S   + RKIEF + E   +P ++V++P+LL +SLEKR++
Sbjct: 268 LGCSESEVSTAVSKTPAIIALSDEILLRKIEFLVNEAAMEPRYIVERPVLLTYSLEKRLV 327

Query: 189 PRFRVMELLKSKKL 230
           PR  V+ +LK K+L
Sbjct: 328 PRHNVLTVLKEKRL 341


>ref|XP_006827175.1| hypothetical protein AMTR_s00010p00255890 [Amborella trichopoda]
           gi|548831604|gb|ERM94412.1| hypothetical protein
           AMTR_s00010p00255890 [Amborella trichopoda]
          Length = 193

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 34/78 (43%), Positives = 51/78 (65%)
 Frame = +3

Query: 12  GWSESDFLTAIRKKPTLLNISQPNMRRKIEFFIKEVGYQPSFVVQQPLLLLFSLEKRVIP 191
           GWSE D  +A R+ P LL++S   +R+ +++F KE+ +   F++ +P L  FSLE RVIP
Sbjct: 73  GWSEDDVFSAFRRNPHLLSLSTKKLRKGMDYFTKEMKFDKPFLIARPKLFFFSLEGRVIP 132

Query: 192 RFRVMELLKSKKLWTKQI 245
           R +V E L+SK L  K +
Sbjct: 133 RRKVTEALRSKNLLEKDV 150


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