BLASTX nr result
ID: Zingiber23_contig00053840
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00053840
(373 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006415489.1| hypothetical protein EUTSA_v10006807mg [Eutr... 95 1e-17
gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thali... 89 5e-16
ref|XP_006306792.1| hypothetical protein CARUB_v10008329mg [Caps... 89 5e-16
ref|NP_174320.2| PPR repeat domain-containing protein [Arabidops... 89 5e-16
ref|XP_006448964.1| hypothetical protein CICLE_v10014263mg [Citr... 89 6e-16
ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arab... 89 6e-16
emb|CBI30945.3| unnamed protein product [Vitis vinifera] 89 8e-16
ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containi... 89 8e-16
emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera] 89 8e-16
gb|EXC33985.1| Pentatricopeptide repeat-containing protein [Moru... 87 2e-15
ref|XP_006468264.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
gb|EOY27595.1| Tetratricopeptide repeat-like superfamily protein... 85 9e-15
gb|EOY27594.1| Tetratricopeptide repeat (TPR)-like superfamily p... 85 9e-15
gb|EMJ15895.1| hypothetical protein PRUPE_ppa026763mg, partial [... 85 9e-15
ref|XP_004485976.1| PREDICTED: pentatricopeptide repeat-containi... 85 1e-14
ref|XP_002531431.1| pentatricopeptide repeat-containing protein,... 84 1e-14
ref|XP_004293531.1| PREDICTED: pentatricopeptide repeat-containi... 82 7e-14
ref|XP_004244882.1| PREDICTED: pentatricopeptide repeat-containi... 82 7e-14
ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containi... 82 7e-14
ref|XP_006836351.1| hypothetical protein AMTR_s00092p00105940 [A... 82 1e-13
>ref|XP_006415489.1| hypothetical protein EUTSA_v10006807mg [Eutrema salsugineum]
gi|557093260|gb|ESQ33842.1| hypothetical protein
EUTSA_v10006807mg [Eutrema salsugineum]
Length = 820
Score = 94.7 bits (234), Expect = 1e-17
Identities = 53/113 (46%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
Frame = -1
Query: 325 EKNEDEPIDGKG----EEPKELLAHYSFNQNQAIVNDEDTLQ-ERDESGHPMVRETCRLI 161
E+ EDE DG G E + SF + + E DES HP+VRET RLI
Sbjct: 102 EEEEDEDDDGNGISGDERDDDFAVLESFGKIPQSREEASRFDVEEDESRHPLVRETNRLI 161
Query: 160 GLRHMWDRKSEAEXXXXXXXXXXHQVCSVLRWQSDERVAMNFFYWADRQWRYR 2
GLR W+ K E + QVC+VLR Q DERVA+ FFYWADRQWRYR
Sbjct: 162 GLRSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYR 214
>gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
Length = 802
Score = 89.4 bits (220), Expect = 5e-16
Identities = 42/70 (60%), Positives = 47/70 (67%)
Frame = -1
Query: 211 ERDESGHPMVRETCRLIGLRHMWDRKSEAEXXXXXXXXXXHQVCSVLRWQSDERVAMNFF 32
E DES HP+VRE RLIGLR W+ K E + QVC+VLR Q DERVA+ FF
Sbjct: 135 EEDESRHPLVREVGRLIGLRSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFF 194
Query: 31 YWADRQWRYR 2
YWADRQWRYR
Sbjct: 195 YWADRQWRYR 204
>ref|XP_006306792.1| hypothetical protein CARUB_v10008329mg [Capsella rubella]
gi|565498308|ref|XP_006306793.1| hypothetical protein
CARUB_v10008329mg [Capsella rubella]
gi|482575503|gb|EOA39690.1| hypothetical protein
CARUB_v10008329mg [Capsella rubella]
gi|482575504|gb|EOA39691.1| hypothetical protein
CARUB_v10008329mg [Capsella rubella]
Length = 810
Score = 89.4 bits (220), Expect = 5e-16
Identities = 42/70 (60%), Positives = 48/70 (68%)
Frame = -1
Query: 211 ERDESGHPMVRETCRLIGLRHMWDRKSEAEXXXXXXXXXXHQVCSVLRWQSDERVAMNFF 32
+ DES HP+VRE RLIGLR W+ K EA+ QVC+VLR Q DERVA+ FF
Sbjct: 136 QEDESRHPLVREIGRLIGLRSSWNPKHEAQMRNLLRSLKPSQVCAVLRSQEDERVALKFF 195
Query: 31 YWADRQWRYR 2
YWADRQWRYR
Sbjct: 196 YWADRQWRYR 205
>ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332193082|gb|AEE31203.1| PPR repeat domain-containing
protein [Arabidopsis thaliana]
Length = 806
Score = 89.4 bits (220), Expect = 5e-16
Identities = 42/70 (60%), Positives = 47/70 (67%)
Frame = -1
Query: 211 ERDESGHPMVRETCRLIGLRHMWDRKSEAEXXXXXXXXXXHQVCSVLRWQSDERVAMNFF 32
E DES HP+VRE RLIGLR W+ K E + QVC+VLR Q DERVA+ FF
Sbjct: 135 EEDESRHPLVREVGRLIGLRSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFF 194
Query: 31 YWADRQWRYR 2
YWADRQWRYR
Sbjct: 195 YWADRQWRYR 204
>ref|XP_006448964.1| hypothetical protein CICLE_v10014263mg [Citrus clementina]
gi|557551575|gb|ESR62204.1| hypothetical protein
CICLE_v10014263mg [Citrus clementina]
Length = 837
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/70 (58%), Positives = 46/70 (65%)
Frame = -1
Query: 211 ERDESGHPMVRETCRLIGLRHMWDRKSEAEXXXXXXXXXXHQVCSVLRWQSDERVAMNFF 32
E DE HP+VRE CRLI LR W K E E Q+C+VLR Q+DERVA+ FF
Sbjct: 164 EEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLRSQADERVALQFF 223
Query: 31 YWADRQWRYR 2
YWADRQWRYR
Sbjct: 224 YWADRQWRYR 233
>ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata] gi|297339453|gb|EFH69870.1| hypothetical protein
ARALYDRAFT_336125 [Arabidopsis lyrata subsp. lyrata]
Length = 814
Score = 89.0 bits (219), Expect = 6e-16
Identities = 42/70 (60%), Positives = 47/70 (67%)
Frame = -1
Query: 211 ERDESGHPMVRETCRLIGLRHMWDRKSEAEXXXXXXXXXXHQVCSVLRWQSDERVAMNFF 32
E DES HP+VRE RLIGLR W+ K E + QVC+VLR Q DERVA+ FF
Sbjct: 138 EEDESRHPLVREIGRLIGLRSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFF 197
Query: 31 YWADRQWRYR 2
YWADRQWRYR
Sbjct: 198 YWADRQWRYR 207
>emb|CBI30945.3| unnamed protein product [Vitis vinifera]
Length = 796
Score = 88.6 bits (218), Expect = 8e-16
Identities = 41/68 (60%), Positives = 47/68 (69%)
Frame = -1
Query: 205 DESGHPMVRETCRLIGLRHMWDRKSEAEXXXXXXXXXXHQVCSVLRWQSDERVAMNFFYW 26
DES HP+VRE CRLI LR W+ K E E QVC+VL+ Q+DERVA+ FFYW
Sbjct: 158 DESRHPLVREICRLIELRSAWNPKLEGELRHLLRSLKPRQVCAVLQLQTDERVALRFFYW 217
Query: 25 ADRQWRYR 2
ADRQWRYR
Sbjct: 218 ADRQWRYR 225
>ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 88.6 bits (218), Expect = 8e-16
Identities = 41/68 (60%), Positives = 47/68 (69%)
Frame = -1
Query: 205 DESGHPMVRETCRLIGLRHMWDRKSEAEXXXXXXXXXXHQVCSVLRWQSDERVAMNFFYW 26
DES HP+VRE CRLI LR W+ K E E QVC+VL+ Q+DERVA+ FFYW
Sbjct: 64 DESRHPLVREICRLIELRSAWNPKLEGELRHLLRSLKPRQVCAVLQLQTDERVALRFFYW 123
Query: 25 ADRQWRYR 2
ADRQWRYR
Sbjct: 124 ADRQWRYR 131
>emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 88.6 bits (218), Expect = 8e-16
Identities = 41/68 (60%), Positives = 47/68 (69%)
Frame = -1
Query: 205 DESGHPMVRETCRLIGLRHMWDRKSEAEXXXXXXXXXXHQVCSVLRWQSDERVAMNFFYW 26
DES HP+VRE CRLI LR W+ K E E QVC+VL+ Q+DERVA+ FFYW
Sbjct: 64 DESRHPLVREICRLIELRSAWNPKLEGELRHLLRSLKPRQVCAVLQLQTDERVALRFFYW 123
Query: 25 ADRQWRYR 2
ADRQWRYR
Sbjct: 124 ADRQWRYR 131
>gb|EXC33985.1| Pentatricopeptide repeat-containing protein [Morus notabilis]
Length = 898
Score = 87.4 bits (215), Expect = 2e-15
Identities = 49/117 (41%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Frame = -1
Query: 343 FSMKSPEKNEDEPIDGKGEEPKELLAHYSFNQNQAIVNDEDTLQERDESG---HPMVRET 173
F E E+ D GE+ E+L N+ I E+ + ++ G HP+VRE
Sbjct: 85 FDDSDDEVEEESDYDDDGEDGFEVLNL----SNRNIAQRENVGRIEEDEGQLRHPLVREV 140
Query: 172 CRLIGLRHMWDRKSEAEXXXXXXXXXXHQVCSVLRWQSDERVAMNFFYWADRQWRYR 2
CRL+ LR W+ K E E QVC VLR DERVA+ FFYWADRQWRYR
Sbjct: 141 CRLVDLRSTWNPKHEGELRHLLRSLKPRQVCDVLRSFDDERVALKFFYWADRQWRYR 197
>ref|XP_006468264.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Citrus sinensis]
Length = 837
Score = 87.0 bits (214), Expect = 2e-15
Identities = 40/70 (57%), Positives = 45/70 (64%)
Frame = -1
Query: 211 ERDESGHPMVRETCRLIGLRHMWDRKSEAEXXXXXXXXXXHQVCSVLRWQSDERVAMNFF 32
E DE HP+VRE CRLI LR W K E E Q+C+VL Q+DERVA+ FF
Sbjct: 164 EEDEFRHPLVREVCRLIELRSAWSPKLEGELRNLLRSLKPRQICAVLHSQADERVALQFF 223
Query: 31 YWADRQWRYR 2
YWADRQWRYR
Sbjct: 224 YWADRQWRYR 233
>gb|EOY27595.1| Tetratricopeptide repeat-like superfamily protein isoform 2
[Theobroma cacao] gi|508780340|gb|EOY27596.1|
Tetratricopeptide repeat-like superfamily protein
isoform 2 [Theobroma cacao] gi|508780341|gb|EOY27597.1|
Tetratricopeptide repeat-like superfamily protein
isoform 2 [Theobroma cacao]
Length = 848
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/70 (57%), Positives = 46/70 (65%)
Frame = -1
Query: 211 ERDESGHPMVRETCRLIGLRHMWDRKSEAEXXXXXXXXXXHQVCSVLRWQSDERVAMNFF 32
E DE HP+VRE CRLI LR W+ K E++ QVC+VL Q DERVA+ FF
Sbjct: 180 EEDEFRHPLVREICRLIQLRSAWNAKLESDLRYLLRSLKPRQVCAVLLSQVDERVALEFF 239
Query: 31 YWADRQWRYR 2
YWADRQWRYR
Sbjct: 240 YWADRQWRYR 249
>gb|EOY27594.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
[Theobroma cacao]
Length = 761
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/70 (57%), Positives = 46/70 (65%)
Frame = -1
Query: 211 ERDESGHPMVRETCRLIGLRHMWDRKSEAEXXXXXXXXXXHQVCSVLRWQSDERVAMNFF 32
E DE HP+VRE CRLI LR W+ K E++ QVC+VL Q DERVA+ FF
Sbjct: 93 EEDEFRHPLVREICRLIQLRSAWNAKLESDLRYLLRSLKPRQVCAVLLSQVDERVALEFF 152
Query: 31 YWADRQWRYR 2
YWADRQWRYR
Sbjct: 153 YWADRQWRYR 162
>gb|EMJ15895.1| hypothetical protein PRUPE_ppa026763mg, partial [Prunus persica]
Length = 802
Score = 85.1 bits (209), Expect = 9e-15
Identities = 49/127 (38%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
Frame = -1
Query: 370 DVNCKYFTSFSMKSPEKNEDEPIDGKGEEPKELLAHYSFN----QNQAIVNDEDTLQERD 203
D K+ ++ P+ E++ D ++ +L+ S N Q + V E + D
Sbjct: 78 DQRSKFDIFDDIEEPDGEEEKDSD---DDDDDLMVLGSSNRVHEQKENFVRVEG---DED 131
Query: 202 ESGHPMVRETCRLIGLRHMWDRKSEAEXXXXXXXXXXHQVCSVLRWQSDERVAMNFFYWA 23
E HP+VRE CRL+ LR W+ K E + QVC+VLR Q+DERVA+ FFYWA
Sbjct: 132 EFRHPLVREVCRLLELRSGWNPKLEGQLRNLLRSLKARQVCAVLRSQADERVALEFFYWA 191
Query: 22 DRQWRYR 2
DRQWRY+
Sbjct: 192 DRQWRYK 198
>ref|XP_004485976.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cicer arietinum]
Length = 784
Score = 84.7 bits (208), Expect = 1e-14
Identities = 45/115 (39%), Positives = 60/115 (52%)
Frame = -1
Query: 346 SFSMKSPEKNEDEPIDGKGEEPKELLAHYSFNQNQAIVNDEDTLQERDESGHPMVRETCR 167
S S+ + E+ +E E ++ + N N+ N + E HP+VRE CR
Sbjct: 70 SASVNDDVEEEENGSSDDDDESLEFISSSNCNNNKHRENIARFEIDESEFRHPLVREVCR 129
Query: 166 LIGLRHMWDRKSEAEXXXXXXXXXXHQVCSVLRWQSDERVAMNFFYWADRQWRYR 2
LI LR W+ K E VC+VLR Q DER+A++FFYWADRQWRYR
Sbjct: 130 LITLRSTWNPKFEGNLRHLLRSLKPPLVCAVLRSQVDERIALSFFYWADRQWRYR 184
>ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528950|gb|EEF30943.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 737
Score = 84.3 bits (207), Expect = 1e-14
Identities = 50/129 (38%), Positives = 69/129 (53%), Gaps = 6/129 (4%)
Frame = -1
Query: 370 DVNCKYFTSFSMKS-PEKNEDEPIDGKGEEP----KELLAHYSFNQNQAIVNDEDTLQ-E 209
D CK S + E ED+ +G+G + +A S ++N D ++ E
Sbjct: 5 DGECKTIISPEIDGFDEIEEDDEDEGEGSDSDVDDSVFMALNSVSRNCGQKEDIWRIEIE 64
Query: 208 RDESGHPMVRETCRLIGLRHMWDRKSEAEXXXXXXXXXXHQVCSVLRWQSDERVAMNFFY 29
+E HP+VRE CRLI R W+ K E + QVC+VL+ QSDER+A++FFY
Sbjct: 65 EEEFRHPLVREVCRLIERRSAWNAKLEGDLRRLLRSLKPRQVCAVLQLQSDERIALDFFY 124
Query: 28 WADRQWRYR 2
WA RQWRYR
Sbjct: 125 WAGRQWRYR 133
>ref|XP_004293531.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 734
Score = 82.0 bits (201), Expect = 7e-14
Identities = 38/70 (54%), Positives = 46/70 (65%)
Frame = -1
Query: 211 ERDESGHPMVRETCRLIGLRHMWDRKSEAEXXXXXXXXXXHQVCSVLRWQSDERVAMNFF 32
+ DE HP+VRE RLI +R W K E E QVC+VL+ Q+DERVA+NFF
Sbjct: 61 DEDEYRHPLVREVGRLIEMRTAWTPKFEGELRHLLRGLKPKQVCAVLKSQADERVALNFF 120
Query: 31 YWADRQWRYR 2
YWADRQWRY+
Sbjct: 121 YWADRQWRYK 130
>ref|XP_004244882.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Solanum lycopersicum]
Length = 833
Score = 82.0 bits (201), Expect = 7e-14
Identities = 51/131 (38%), Positives = 72/131 (54%), Gaps = 10/131 (7%)
Frame = -1
Query: 364 NCKYFTSFSMKSP------EKNEDEPIDGKGEEPKELLAHYSFNQNQAIVNDED----TL 215
NC Y + S S E++++E +D ++ K L SF + Q VN + +
Sbjct: 105 NCSYIHNASTCSFDHVHEFEESDNEDLDCTDDDFKVL---DSFGKTQKQVNGAENGGISG 161
Query: 214 QERDESGHPMVRETCRLIGLRHMWDRKSEAEXXXXXXXXXXHQVCSVLRWQSDERVAMNF 35
+ +E GH +V+ETCRLI R W+ + E E HQVC+ L QSDER+A+ F
Sbjct: 162 RIEEEMGHHLVKETCRLIEHRSAWNPQLEIELRRLLRSMKPHQVCAALTSQSDERIALKF 221
Query: 34 FYWADRQWRYR 2
FYWAD+QWRYR
Sbjct: 222 FYWADQQWRYR 232
>ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 847
Score = 82.0 bits (201), Expect = 7e-14
Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Frame = -1
Query: 337 MKSPEKNEDEPIDGKGEEPKELLAHYSFNQNQAIVNDEDTLQ-ERDESGHPMVRETCRLI 161
+++ E N++E DG + +LL N++ ND ++ D H +VR+TC+LI
Sbjct: 131 IEAEESNDEEEEDGDLGDAADLLGSNLSNRDPGQGNDCKKVEIGEDVFRHSLVRDTCKLI 190
Query: 160 GLRHMWDRKSEAEXXXXXXXXXXHQVCSVLRWQSDERVAMNFFYWADRQWRYR 2
L W+RK E E QVC+VL Q DER A+ FFYWADR WRYR
Sbjct: 191 QLSSSWNRKFEGELRYLVRSLNPLQVCAVLLSQEDERNALRFFYWADRLWRYR 243
>ref|XP_006836351.1| hypothetical protein AMTR_s00092p00105940 [Amborella trichopoda]
gi|548838869|gb|ERM99204.1| hypothetical protein
AMTR_s00092p00105940 [Amborella trichopoda]
Length = 829
Score = 81.6 bits (200), Expect = 1e-13
Identities = 39/83 (46%), Positives = 54/83 (65%)
Frame = -1
Query: 250 QNQAIVNDEDTLQERDESGHPMVRETCRLIGLRHMWDRKSEAEXXXXXXXXXXHQVCSVL 71
QN I ND+ +E +P+VRETCRL+ ++W+ E + HQ+C+VL
Sbjct: 152 QNSNIKNDD----YEEEFRNPLVRETCRLLEKSNLWNPNLEGQLRNLVRSLKPHQICAVL 207
Query: 70 RWQSDERVAMNFFYWADRQWRYR 2
R QSDER++++FFYWADRQWRYR
Sbjct: 208 RSQSDERISLSFFYWADRQWRYR 230