BLASTX nr result
ID: Zingiber23_contig00053790
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00053790
(259 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCL97781.2| polyprotein, partial [Mulberry badnavirus 1] 60 4e-15
ref|YP_002916056.1| polyprotein [Sweetpotato badnavirus B] gi|23... 54 6e-13
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|... 79 6e-13
ref|YP_004581512.1| polyprotein [Sweetpotato badnavirus A] gi|22... 52 3e-12
ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]... 75 9e-12
emb|CAG70342.1| CP, RT, RNaseH and protease polyprotein [Cacao s... 75 9e-12
ref|XP_006858539.1| hypothetical protein AMTR_s00071p00160240 [A... 50 3e-11
ref|NP_758808.1| polyprotein [Taro bacilliform virus] gi|2581483... 49 1e-10
ref|NP_041734.1| polyprotein [Cacao swollen shoot virus] gi|3478... 70 2e-10
emb|CAE76628.1| polyprotein [Cacao swollen shoot virus] 70 2e-10
emb|CAE81285.1| polyprotein [Cacao swollen shoot virus] 70 3e-10
emb|CAE81279.1| polyprotein [Cacao swollen shoot virus] 70 3e-10
emb|CAD59232.1| polyprotein [Cacao swollen shoot virus] 70 3e-10
ref|YP_610965.1| hypothetical protein DMV_gp3 [Dracaena mottle v... 49 3e-10
ref|YP_001293182.1| hypothetical protein LBBV_gp3 [Lucky bamboo ... 49 3e-10
gb|AFM82591.1| polyprotein [Cacao swollen shoot virus] 69 7e-10
gb|AHG94942.1| ORF3, partial [Dioscorea bacilliform virus] 69 9e-10
gb|ABI47986.1| ORF3 protein [Dioscorea bacilliform virus] 67 2e-09
ref|YP_001036293.1| ORF3 protein [Dioscorea bacilliform virus] g... 67 2e-09
gb|AER00544.1| ORF III [Citrus yellow mosaic virus] 67 3e-09
>emb|CCL97781.2| polyprotein, partial [Mulberry badnavirus 1]
Length = 270
Score = 59.7 bits (143), Expect(2) = 4e-15
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = +2
Query: 5 QAFTDSKEKIEFIENLPGEIEKITWVQ*RMTYATEYDALISISDGREGTQHFI 163
Q F+ +EK++FIENL GE EK+ W+ RM Y EY+ LI+ SDG EG Q+ +
Sbjct: 32 QMFSSGQEKMDFIENLLGEKEKLVWISWRMAYQDEYNQLIAKSDGYEGVQNIL 84
Score = 47.0 bits (110), Expect(2) = 4e-15
Identities = 21/34 (61%), Positives = 28/34 (82%)
Frame = +3
Query: 153 NILSQMRRVFSAEDSTQGSTEIQNSAYRDLEKLS 254
NILSQ+RRVF+ +D GST+ Q+ AYRD+EKL+
Sbjct: 82 NILSQIRRVFTLQDPATGSTKAQDQAYRDIEKLN 115
>ref|YP_002916056.1| polyprotein [Sweetpotato badnavirus B] gi|237846579|gb|ACN56750.1|
polyprotein [Sweetpotato badnavirus B]
Length = 1170
Score = 54.3 bits (129), Expect(2) = 6e-13
Identities = 22/49 (44%), Positives = 36/49 (73%)
Frame = +2
Query: 17 DSKEKIEFIENLPGEIEKITWVQ*RMTYATEYDALISISDGREGTQHFI 163
D++EK++++ENL GE K+ W+Q R Y EY A+++ ++GR GTQ+ I
Sbjct: 665 DTQEKVDYMENLLGETAKLAWIQWRTVYEDEYKAIVAQAEGRMGTQNVI 713
Score = 45.1 bits (105), Expect(2) = 6e-13
Identities = 19/33 (57%), Positives = 26/33 (78%)
Frame = +3
Query: 153 NILSQMRRVFSAEDSTQGSTEIQNSAYRDLEKL 251
N++SQ+RR+ + D QGST IQ+ AYRDLE+L
Sbjct: 711 NVISQVRRILTLSDPVQGSTAIQDQAYRDLERL 743
>ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|gb|AEF56561.1|
polyprotein [Fig badnavirus 1]
Length = 1837
Score = 79.0 bits (193), Expect = 6e-13
Identities = 34/62 (54%), Positives = 50/62 (80%)
Frame = +2
Query: 2 SQAFTDSKEKIEFIENLPGEIEKITWVQ*RMTYATEYDALISISDGREGTQHFIPNEAGF 181
+Q FTD+++KI+++ENL GEIEK+ W+Q RMTYATEY+AL++I +GR+GTQ+ +
Sbjct: 591 TQGFTDTRDKIKYMENLLGEIEKLIWIQWRMTYATEYEALVAIGEGRDGTQNILSQMRRV 650
Query: 182 FS 187
FS
Sbjct: 651 FS 652
>ref|YP_004581512.1| polyprotein [Sweetpotato badnavirus A] gi|224566902|gb|ACN56745.1|
polyprotein [Sweetpotato badnavirus A]
Length = 1189
Score = 52.4 bits (124), Expect(2) = 3e-12
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = +2
Query: 17 DSKEKIEFIENLPGEIEKITWVQ*RMTYATEYDALISISDGREGTQHFI 163
D++EK++++ENL GE K+ W+Q R Y EY ++ ++GR GTQ+ I
Sbjct: 678 DTQEKVDYMENLLGETAKLAWIQWRTVYEDEYKTIVGQAEGRMGTQNVI 726
Score = 44.7 bits (104), Expect(2) = 3e-12
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +3
Query: 153 NILSQMRRVFSAEDSTQGSTEIQNSAYRDLEKL 251
N++SQ+RR+ + D QGST +Q+ AYRDLE+L
Sbjct: 724 NVISQVRRILTLSDPVQGSTAVQDQAYRDLERL 756
>ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]
gi|584388573|gb|AHI90954.1| polyprotein [Hibiscus
bacilliform virus GD1]
Length = 1892
Score = 75.1 bits (183), Expect = 9e-12
Identities = 33/54 (61%), Positives = 43/54 (79%)
Frame = +2
Query: 2 SQAFTDSKEKIEFIENLPGEIEKITWVQ*RMTYATEYDALISISDGREGTQHFI 163
SQ FTDSK+K EF+ENL GE EK+TWVQ RM + TEY +++ +DGREGTQ+ +
Sbjct: 615 SQGFTDSKDKAEFMENLLGETEKLTWVQWRMNFPTEYQEMVNAADGREGTQNIL 668
>emb|CAG70342.1| CP, RT, RNaseH and protease polyprotein [Cacao swollen shoot virus]
Length = 1868
Score = 75.1 bits (183), Expect = 9e-12
Identities = 34/62 (54%), Positives = 45/62 (72%)
Frame = +2
Query: 2 SQAFTDSKEKIEFIENLPGEIEKITWVQ*RMTYATEYDALISISDGREGTQHFIPNEAGF 181
+Q FTD EK+EFIENL GE EK+TW+Q RM Y TEY L++++DGR+GTQ+ +
Sbjct: 596 AQGFTDPVEKMEFIENLLGETEKLTWIQWRMNYETEYQTLLTLADGRQGTQNILSQIKRV 655
Query: 182 FS 187
FS
Sbjct: 656 FS 657
>ref|XP_006858539.1| hypothetical protein AMTR_s00071p00160240 [Amborella trichopoda]
gi|548862648|gb|ERN20006.1| hypothetical protein
AMTR_s00071p00160240 [Amborella trichopoda]
Length = 741
Score = 50.4 bits (119), Expect(2) = 3e-11
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2
Query: 17 DSKEKIEFIENLPGEIEKITWVQ*RMTYATEYDALISISD 136
D+K K +IENL GE EK W+Q RM Y EYDA+++++D
Sbjct: 382 DNKTKAAYIENLLGETEKKVWIQWRMAYQAEYDAIVNVAD 421
Score = 43.1 bits (100), Expect(2) = 3e-11
Identities = 20/34 (58%), Positives = 27/34 (79%)
Frame = +3
Query: 153 NILSQMRRVFSAEDSTQGSTEIQNSAYRDLEKLS 254
N++SQ+RRV + ED QGST Q+ AY+DLE+LS
Sbjct: 425 NLISQIRRVITLEDPFQGSTMEQDQAYQDLERLS 458
>ref|NP_758808.1| polyprotein [Taro bacilliform virus]
gi|25814833|gb|AAN75640.1|AF357836_3 polyprotein [taro
bacilliform virus]
Length = 1881
Score = 48.9 bits (115), Expect(2) = 1e-10
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = +2
Query: 5 QAFTDSKEKIEFIENLPGEIEKITWVQ*RMTYATEYDALISISD 136
+ + ++ K +++ENL GE+EK TW+Q R TY +EYDAL+ SD
Sbjct: 505 KVWPSNEAKAKYMENLLGEMEKKTWIQWRTTYVSEYDALVQQSD 548
Score = 42.7 bits (99), Expect(2) = 1e-10
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +3
Query: 153 NILSQMRRVFSAEDSTQGSTEIQNSAYRDLEKLS 254
N+LSQ+RR+F +D QGST Q+ AY DLE++S
Sbjct: 552 NLLSQVRRIFLLQDPYQGSTAEQDQAYNDLERIS 585
>ref|NP_041734.1| polyprotein [Cacao swollen shoot virus] gi|347871|gb|AAA03171.1|
polyprotein [Cacao swollen shoot virus]
Length = 1834
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = +2
Query: 2 SQAFTDSKEKIEFIENLPGEIEKITWVQ*RMTYATEYDALISISDGREGTQHFIPNEAGF 181
+Q FTD EK+EF+ENL GE EK+TW+Q RM Y EY L++ +DGR+GTQ+ +
Sbjct: 565 AQGFTDPTEKMEFMENLLGETEKLTWIQWRMNYEAEYQQLLTQADGRQGTQNILSQIKRI 624
Query: 182 FS 187
FS
Sbjct: 625 FS 626
>emb|CAE76628.1| polyprotein [Cacao swollen shoot virus]
Length = 1847
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/62 (51%), Positives = 44/62 (70%)
Frame = +2
Query: 2 SQAFTDSKEKIEFIENLPGEIEKITWVQ*RMTYATEYDALISISDGREGTQHFIPNEAGF 181
+Q+FTD EK+EF+ENL GE EK+TW+Q RM Y EY L++ +DGR+GTQ+ +
Sbjct: 570 AQSFTDPTEKMEFMENLLGETEKLTWIQWRMNYEAEYQQLLTQADGRQGTQNILSQIKRV 629
Query: 182 FS 187
FS
Sbjct: 630 FS 631
>emb|CAE81285.1| polyprotein [Cacao swollen shoot virus]
Length = 1770
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = +2
Query: 2 SQAFTDSKEKIEFIENLPGEIEKITWVQ*RMTYATEYDALISISDGREGTQHFIPNEAGF 181
+Q FTD EK+EF+ENL GE EK+TW+Q RM Y EY L++ +DGR+GTQ+ +
Sbjct: 493 AQGFTDPTEKMEFMENLLGETEKLTWIQWRMNYEAEYQQLLTQADGRQGTQNILSQIKRV 552
Query: 182 FS 187
FS
Sbjct: 553 FS 554
>emb|CAE81279.1| polyprotein [Cacao swollen shoot virus]
Length = 1816
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = +2
Query: 2 SQAFTDSKEKIEFIENLPGEIEKITWVQ*RMTYATEYDALISISDGREGTQHFIPNEAGF 181
+Q FTD EK+EF+ENL GE EK+TW+Q RM Y EY L++ +DGR+GTQ+ +
Sbjct: 569 AQGFTDPTEKMEFMENLLGETEKLTWIQWRMNYEAEYQQLLTQADGRQGTQNILSQIKRV 628
Query: 182 FS 187
FS
Sbjct: 629 FS 630
>emb|CAD59232.1| polyprotein [Cacao swollen shoot virus]
Length = 1839
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = +2
Query: 2 SQAFTDSKEKIEFIENLPGEIEKITWVQ*RMTYATEYDALISISDGREGTQHFIPNEAGF 181
+Q FTD EK+EF+ENL GE EK+TW+Q RM Y EY L++ +DGR+GTQ+ +
Sbjct: 565 AQGFTDPTEKMEFMENLLGETEKLTWIQWRMNYEAEYQQLLTQADGRQGTQNILSQIKRV 624
Query: 182 FS 187
FS
Sbjct: 625 FS 626
>ref|YP_610965.1| hypothetical protein DMV_gp3 [Dracaena mottle virus]
gi|92430216|gb|ABE77344.1| hypothetical protein
[Dracaena mottle virus]
Length = 1916
Score = 48.9 bits (115), Expect(2) = 3e-10
Identities = 19/44 (43%), Positives = 33/44 (75%)
Frame = +2
Query: 5 QAFTDSKEKIEFIENLPGEIEKITWVQ*RMTYATEYDALISISD 136
+ F+D++ K+ ++ENL GE EK W+Q RM + EY++LI+++D
Sbjct: 628 KVFSDNRSKLMYVENLLGEDEKKAWIQWRMAFEQEYESLIAVAD 671
Score = 41.2 bits (95), Expect(2) = 3e-10
Identities = 19/33 (57%), Positives = 26/33 (78%)
Frame = +3
Query: 156 ILSQMRRVFSAEDSTQGSTEIQNSAYRDLEKLS 254
I+SQ+RR+ + ED +QGSTE Q+ AY DL +LS
Sbjct: 676 IISQVRRIITLEDPSQGSTEEQDRAYMDLGRLS 708
>ref|YP_001293182.1| hypothetical protein LBBV_gp3 [Lucky bamboo bacilliform virus]
gi|148645292|gb|ABR01170.1| hypothetical protein [Lucky
bamboo bacilliform virus]
Length = 1913
Score = 48.9 bits (115), Expect(2) = 3e-10
Identities = 19/44 (43%), Positives = 33/44 (75%)
Frame = +2
Query: 5 QAFTDSKEKIEFIENLPGEIEKITWVQ*RMTYATEYDALISISD 136
+ F+D++ K+ ++ENL GE EK W+Q RM + EY++LI+++D
Sbjct: 626 KVFSDNRSKLMYVENLLGEDEKKVWIQWRMAFEQEYESLIAVAD 669
Score = 41.2 bits (95), Expect(2) = 3e-10
Identities = 19/33 (57%), Positives = 26/33 (78%)
Frame = +3
Query: 156 ILSQMRRVFSAEDSTQGSTEIQNSAYRDLEKLS 254
I+SQ+RR+ + ED +QGSTE Q+ AY DL +LS
Sbjct: 674 IISQVRRIITLEDPSQGSTEEQDRAYMDLGRLS 706
>gb|AFM82591.1| polyprotein [Cacao swollen shoot virus]
Length = 1872
Score = 68.9 bits (167), Expect = 7e-10
Identities = 31/62 (50%), Positives = 43/62 (69%)
Frame = +2
Query: 2 SQAFTDSKEKIEFIENLPGEIEKITWVQ*RMTYATEYDALISISDGREGTQHFIPNEAGF 181
+Q TD EK+EFIENL GE EK+TW+Q RM Y EY L+++++GR+GTQ+ +
Sbjct: 598 AQGITDPTEKMEFIENLLGETEKLTWIQWRMRYEAEYQQLLTLAEGRQGTQNILSQIKRV 657
Query: 182 FS 187
FS
Sbjct: 658 FS 659
>gb|AHG94942.1| ORF3, partial [Dioscorea bacilliform virus]
Length = 1395
Score = 68.6 bits (166), Expect = 9e-10
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = +2
Query: 5 QAFTDSKEKIEFIENLPGEIEKITWVQ*RMTYATEYDALISISDGREGTQHFIPNEAGFF 184
Q+F KEK EFIENL GE EK+TW+Q R + TEY+ L++ +DGREGTQ+ + + F
Sbjct: 181 QSFITGKEKAEFIENLLGETEKLTWIQWRTAFPTEYETLLASADGREGTQNILSHIRTIF 240
Query: 185 S 187
+
Sbjct: 241 T 241
>gb|ABI47986.1| ORF3 protein [Dioscorea bacilliform virus]
Length = 1295
Score = 67.4 bits (163), Expect = 2e-09
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +2
Query: 8 AFTDSKEKIEFIENLPGEIEKITWVQ*RMTYATEYDALISISDGREGTQHFIPNEAGFFS 187
+F +EK +FIENL GE EK+TW+Q R T+ E+D+LI+ +DGREGTQ+ I FS
Sbjct: 705 SFISGREKADFIENLLGETEKLTWIQWRTTFNAEFDSLIAAADGREGTQNIISQIRTIFS 764
>ref|YP_001036293.1| ORF3 protein [Dioscorea bacilliform virus]
gi|113901272|gb|ABI47983.1| ORF3 protein [Dioscorea
bacilliform virus]
Length = 1887
Score = 67.4 bits (163), Expect = 2e-09
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +2
Query: 8 AFTDSKEKIEFIENLPGEIEKITWVQ*RMTYATEYDALISISDGREGTQHFIPNEAGFFS 187
+F +EK +FIENL GE EK+TW+Q R T+ E+D+LI+ +DGREGTQ+ I FS
Sbjct: 705 SFISGREKADFIENLLGETEKLTWIQWRTTFNAEFDSLIAAADGREGTQNIISQIRTIFS 764
>gb|AER00544.1| ORF III [Citrus yellow mosaic virus]
Length = 1976
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/61 (50%), Positives = 40/61 (65%)
Frame = +2
Query: 5 QAFTDSKEKIEFIENLPGEIEKITWVQ*RMTYATEYDALISISDGREGTQHFIPNEAGFF 184
Q TD ++K EFIEN+ G EKI W Q RM YA EY+ L++ +DGREGTQ+ + F
Sbjct: 697 QGITDPRDKAEFIENMSGPTEKIIWTQWRMGYADEYENLVTTADGREGTQNILSQMRRVF 756
Query: 185 S 187
S
Sbjct: 757 S 757