BLASTX nr result
ID: Zingiber23_contig00053747
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00053747
(276 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containi... 141 1e-31
gb|EMJ01512.1| hypothetical protein PRUPE_ppa001249mg [Prunus pe... 140 1e-31
ref|XP_006384843.1| hypothetical protein POPTR_0004s21560g [Popu... 137 1e-30
ref|XP_002328265.1| predicted protein [Populus trichocarpa] 137 1e-30
gb|EOX97443.1| Pentatricopeptide repeat (PPR) superfamily protei... 136 3e-30
gb|EOX97442.1| Pentatricopeptide repeat (PPR) superfamily protei... 136 3e-30
ref|XP_002527150.1| pentatricopeptide repeat-containing protein,... 135 4e-30
ref|XP_004290060.1| PREDICTED: pentatricopeptide repeat-containi... 135 6e-30
gb|EXC31542.1| hypothetical protein L484_006574 [Morus notabilis] 131 8e-29
ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containi... 129 5e-28
ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containi... 129 5e-28
ref|XP_006296960.1| hypothetical protein CARUB_v10012952mg, part... 125 6e-27
ref|NP_179305.2| pentatricopeptide repeat-containing protein [Ar... 125 6e-27
ref|XP_006409347.1| hypothetical protein EUTSA_v10022542mg [Eutr... 123 2e-26
ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. l... 123 2e-26
ref|XP_006847961.1| hypothetical protein AMTR_s00029p00147240 [A... 123 3e-26
ref|XP_006350361.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 119 3e-25
ref|XP_006422433.1| hypothetical protein CICLE_v10027787mg [Citr... 119 5e-25
ref|XP_006486600.1| PREDICTED: pentatricopeptide repeat-containi... 118 7e-25
ref|XP_004231526.1| PREDICTED: pentatricopeptide repeat-containi... 117 2e-24
>ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera] gi|297744485|emb|CBI37747.3| unnamed
protein product [Vitis vinifera]
Length = 878
Score = 141 bits (355), Expect = 1e-31
Identities = 66/90 (73%), Positives = 79/90 (87%)
Frame = +3
Query: 6 PNFFSCNILLKSLWKEGRSSEAEKLLQKMIEKSYNLDIVTCNIIINGLCKSGKLDKAVKI 185
PN ++CNILL SLWKEGR EAEKLLQKM E+SY+LD VTCNI+I+GLCKSGKLD+AV+I
Sbjct: 433 PNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEI 492
Query: 186 VNGMWQHGSAALGELGNAFLGLIDTSKHNK 275
V GMW HGSAALG LGN+F+GL+D+S + K
Sbjct: 493 VEGMWIHGSAALGNLGNSFIGLVDSSSNGK 522
>gb|EMJ01512.1| hypothetical protein PRUPE_ppa001249mg [Prunus persica]
Length = 872
Score = 140 bits (354), Expect = 1e-31
Identities = 64/91 (70%), Positives = 77/91 (84%)
Frame = +3
Query: 3 FPNFFSCNILLKSLWKEGRSSEAEKLLQKMIEKSYNLDIVTCNIIINGLCKSGKLDKAVK 182
FPN +CNILL SLWKEGR+SEAE+LLQKM E+ Y LD VTCNI+I+GLC GKLDKA++
Sbjct: 431 FPNTHTCNILLHSLWKEGRTSEAEELLQKMNERGYGLDTVTCNIVIDGLCNDGKLDKAIE 490
Query: 183 IVNGMWQHGSAALGELGNAFLGLIDTSKHNK 275
IV+GMW HGSAALG LGN+F+GL+D S + K
Sbjct: 491 IVSGMWTHGSAALGNLGNSFIGLVDDSNNGK 521
>ref|XP_006384843.1| hypothetical protein POPTR_0004s21560g [Populus trichocarpa]
gi|550341611|gb|ERP62640.1| hypothetical protein
POPTR_0004s21560g [Populus trichocarpa]
Length = 874
Score = 137 bits (345), Expect = 1e-30
Identities = 63/90 (70%), Positives = 76/90 (84%)
Frame = +3
Query: 6 PNFFSCNILLKSLWKEGRSSEAEKLLQKMIEKSYNLDIVTCNIIINGLCKSGKLDKAVKI 185
PN ++CNILL SLWKEGR SEAE+LLQKM EK Y +D VTCNI+I+GLC +GKLDKA++I
Sbjct: 429 PNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEI 488
Query: 186 VNGMWQHGSAALGELGNAFLGLIDTSKHNK 275
VNGMW HGSAALG LGN+++GL+D S K
Sbjct: 489 VNGMWTHGSAALGNLGNSYIGLVDDSDSRK 518
>ref|XP_002328265.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 137 bits (345), Expect = 1e-30
Identities = 63/90 (70%), Positives = 76/90 (84%)
Frame = +3
Query: 6 PNFFSCNILLKSLWKEGRSSEAEKLLQKMIEKSYNLDIVTCNIIINGLCKSGKLDKAVKI 185
PN ++CNILL SLWKEGR SEAE+LLQKM EK Y +D VTCNI+I+GLC +GKLDKA++I
Sbjct: 338 PNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEI 397
Query: 186 VNGMWQHGSAALGELGNAFLGLIDTSKHNK 275
VNGMW HGSAALG LGN+++GL+D S K
Sbjct: 398 VNGMWTHGSAALGNLGNSYIGLVDDSDSRK 427
>gb|EOX97443.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2
[Theobroma cacao]
Length = 632
Score = 136 bits (343), Expect = 3e-30
Identities = 63/91 (69%), Positives = 76/91 (83%)
Frame = +3
Query: 3 FPNFFSCNILLKSLWKEGRSSEAEKLLQKMIEKSYNLDIVTCNIIINGLCKSGKLDKAVK 182
FPN ++CNILL SLWKEG+ SEAE LLQKM EK Y +D VTCNI+I+GLCKSGKLDKA++
Sbjct: 186 FPNTYTCNILLHSLWKEGKISEAEDLLQKMNEKGYGVDTVTCNIVIDGLCKSGKLDKAME 245
Query: 183 IVNGMWQHGSAALGELGNAFLGLIDTSKHNK 275
I N MW HGSAALG LGN+F+GL+D + +K
Sbjct: 246 IGNEMWTHGSAALGNLGNSFIGLVDDANSSK 276
>gb|EOX97442.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 1
[Theobroma cacao]
Length = 872
Score = 136 bits (343), Expect = 3e-30
Identities = 63/91 (69%), Positives = 76/91 (83%)
Frame = +3
Query: 3 FPNFFSCNILLKSLWKEGRSSEAEKLLQKMIEKSYNLDIVTCNIIINGLCKSGKLDKAVK 182
FPN ++CNILL SLWKEG+ SEAE LLQKM EK Y +D VTCNI+I+GLCKSGKLDKA++
Sbjct: 426 FPNTYTCNILLHSLWKEGKISEAEDLLQKMNEKGYGVDTVTCNIVIDGLCKSGKLDKAME 485
Query: 183 IVNGMWQHGSAALGELGNAFLGLIDTSKHNK 275
I N MW HGSAALG LGN+F+GL+D + +K
Sbjct: 486 IGNEMWTHGSAALGNLGNSFIGLVDDANSSK 516
>ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223533489|gb|EEF35232.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 874
Score = 135 bits (341), Expect = 4e-30
Identities = 62/90 (68%), Positives = 74/90 (82%)
Frame = +3
Query: 6 PNFFSCNILLKSLWKEGRSSEAEKLLQKMIEKSYNLDIVTCNIIINGLCKSGKLDKAVKI 185
PN ++CN+LL SLWKEGR SEAE LLQKM EK Y +D VTCNIIIN LC +G+LDKA++I
Sbjct: 429 PNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEI 488
Query: 186 VNGMWQHGSAALGELGNAFLGLIDTSKHNK 275
VNGMW HGSAALG LGN+F+GL+D + K
Sbjct: 489 VNGMWTHGSAALGNLGNSFIGLVDDTISGK 518
>ref|XP_004290060.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Fragaria vesca subsp. vesca]
Length = 871
Score = 135 bits (340), Expect = 6e-30
Identities = 62/85 (72%), Positives = 72/85 (84%)
Frame = +3
Query: 3 FPNFFSCNILLKSLWKEGRSSEAEKLLQKMIEKSYNLDIVTCNIIINGLCKSGKLDKAVK 182
FPN +CNILL SLWKEGR SEAE+LLQKM EK Y LD VTCNI+I+GLC GKLDKA++
Sbjct: 431 FPNTHTCNILLHSLWKEGRISEAEELLQKMNEKGYGLDTVTCNIVIDGLCNDGKLDKAIE 490
Query: 183 IVNGMWQHGSAALGELGNAFLGLID 257
IV+GMW HG AALG LGN+F+GL+D
Sbjct: 491 IVSGMWTHGGAALGNLGNSFVGLVD 515
>gb|EXC31542.1| hypothetical protein L484_006574 [Morus notabilis]
Length = 864
Score = 131 bits (330), Expect = 8e-29
Identities = 58/90 (64%), Positives = 76/90 (84%)
Frame = +3
Query: 6 PNFFSCNILLKSLWKEGRSSEAEKLLQKMIEKSYNLDIVTCNIIINGLCKSGKLDKAVKI 185
PN +CNILL SLWKEG++SEAE+LLQKM E+ Y +DIVTCNI+I+GLC GK+DKA++I
Sbjct: 423 PNTRTCNILLHSLWKEGKTSEAEELLQKMYERGYGIDIVTCNIVIDGLCNIGKMDKAIEI 482
Query: 186 VNGMWQHGSAALGELGNAFLGLIDTSKHNK 275
V+ MW HGSAALG LGN+F+GL+D + + +
Sbjct: 483 VSEMWTHGSAALGHLGNSFIGLVDDNNNGR 512
>ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 129 bits (323), Expect = 5e-28
Identities = 59/91 (64%), Positives = 72/91 (79%)
Frame = +3
Query: 3 FPNFFSCNILLKSLWKEGRSSEAEKLLQKMIEKSYNLDIVTCNIIINGLCKSGKLDKAVK 182
FPN ++CNILL SLWKEGR+SEAE LLQ M E+ Y LD VTCN +INGLCK+G LDKA++
Sbjct: 433 FPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIE 492
Query: 183 IVNGMWQHGSAALGELGNAFLGLIDTSKHNK 275
IV+GMW GSA+LG LGN+F+ L D + K
Sbjct: 493 IVSGMWTRGSASLGNLGNSFIDLFDIRNNGK 523
>ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
gi|449472527|ref|XP_004153621.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 129 bits (323), Expect = 5e-28
Identities = 59/91 (64%), Positives = 72/91 (79%)
Frame = +3
Query: 3 FPNFFSCNILLKSLWKEGRSSEAEKLLQKMIEKSYNLDIVTCNIIINGLCKSGKLDKAVK 182
FPN ++CNILL SLWKEGR+SEAE LLQ M E+ Y LD VTCN +INGLCK+G LDKA++
Sbjct: 433 FPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIE 492
Query: 183 IVNGMWQHGSAALGELGNAFLGLIDTSKHNK 275
IV+GMW GSA+LG LGN+F+ L D + K
Sbjct: 493 IVSGMWTRGSASLGNLGNSFIDLFDIRNNGK 523
>ref|XP_006296960.1| hypothetical protein CARUB_v10012952mg, partial [Capsella rubella]
gi|482565669|gb|EOA29858.1| hypothetical protein
CARUB_v10012952mg, partial [Capsella rubella]
Length = 881
Score = 125 bits (314), Expect = 6e-27
Identities = 59/86 (68%), Positives = 73/86 (84%)
Frame = +3
Query: 6 PNFFSCNILLKSLWKEGRSSEAEKLLQKMIEKSYNLDIVTCNIIINGLCKSGKLDKAVKI 185
PN ++CNILL SLWK GR SEAE+LL++M EK Y LD VTCNIII+GLC+SG+LDKA++I
Sbjct: 436 PNAYTCNILLHSLWKMGRISEAEELLRQMNEKGYGLDTVTCNIIIDGLCESGELDKAIEI 495
Query: 186 VNGMWQHGSAALGELGNAFLGLIDTS 263
V GM HGSAALG LGN+++GL+D S
Sbjct: 496 VKGMRVHGSAALGNLGNSYIGLVDDS 521
>ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g17140 gi|110737729|dbj|BAF00803.1| hypothetical
protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 125 bits (314), Expect = 6e-27
Identities = 59/86 (68%), Positives = 72/86 (83%)
Frame = +3
Query: 6 PNFFSCNILLKSLWKEGRSSEAEKLLQKMIEKSYNLDIVTCNIIINGLCKSGKLDKAVKI 185
PN ++CNILL SLWK GR SEAE+LL+KM EK Y LD VTCNII++GLC SG+LDKA++I
Sbjct: 429 PNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEI 488
Query: 186 VNGMWQHGSAALGELGNAFLGLIDTS 263
V GM HGSAALG LGN+++GL+D S
Sbjct: 489 VKGMRVHGSAALGNLGNSYIGLVDDS 514
>ref|XP_006409347.1| hypothetical protein EUTSA_v10022542mg [Eutrema salsugineum]
gi|557110509|gb|ESQ50800.1| hypothetical protein
EUTSA_v10022542mg [Eutrema salsugineum]
Length = 877
Score = 123 bits (309), Expect = 2e-26
Identities = 58/86 (67%), Positives = 70/86 (81%)
Frame = +3
Query: 6 PNFFSCNILLKSLWKEGRSSEAEKLLQKMIEKSYNLDIVTCNIIINGLCKSGKLDKAVKI 185
PN ++CNILL SLWK GR SEAE LL+KM EK Y +D VTCNII++GLC SG LDKA++I
Sbjct: 432 PNAYTCNILLHSLWKMGRMSEAEDLLRKMNEKGYGIDTVTCNIIVDGLCGSGDLDKAIEI 491
Query: 186 VNGMWQHGSAALGELGNAFLGLIDTS 263
V GM HGSAALG LGN+++GL+D S
Sbjct: 492 VKGMRVHGSAALGNLGNSYIGLVDDS 517
>ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 874
Score = 123 bits (309), Expect = 2e-26
Identities = 58/86 (67%), Positives = 71/86 (82%)
Frame = +3
Query: 6 PNFFSCNILLKSLWKEGRSSEAEKLLQKMIEKSYNLDIVTCNIIINGLCKSGKLDKAVKI 185
PN ++CNILL SLW GR SEAE+LL+KM EK Y LD VTCNII++GLC SG+LDKA++I
Sbjct: 429 PNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEI 488
Query: 186 VNGMWQHGSAALGELGNAFLGLIDTS 263
V GM HGSAALG LGN+++GL+D S
Sbjct: 489 VKGMRVHGSAALGNLGNSYIGLVDDS 514
>ref|XP_006847961.1| hypothetical protein AMTR_s00029p00147240 [Amborella trichopoda]
gi|548851266|gb|ERN09542.1| hypothetical protein
AMTR_s00029p00147240 [Amborella trichopoda]
Length = 889
Score = 123 bits (308), Expect = 3e-26
Identities = 56/91 (61%), Positives = 74/91 (81%)
Frame = +3
Query: 3 FPNFFSCNILLKSLWKEGRSSEAEKLLQKMIEKSYNLDIVTCNIIINGLCKSGKLDKAVK 182
FPN +CNILL+SLW+EGR EA++ LQ+M EK D +TCNI+I+GLCKS KLD+A+
Sbjct: 431 FPNTVTCNILLQSLWREGRVLEAKRFLQRMSEKGRIPDTMTCNIVIDGLCKSAKLDEAIT 490
Query: 183 IVNGMWQHGSAALGELGNAFLGLIDTSKHNK 275
I++GMW+HGSAALG+LGNA LGL+D++ K
Sbjct: 491 IMDGMWEHGSAALGDLGNAVLGLVDSNSCRK 521
>ref|XP_006350361.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g17140-like [Solanum tuberosum]
Length = 849
Score = 119 bits (299), Expect = 3e-25
Identities = 51/90 (56%), Positives = 74/90 (82%)
Frame = +3
Query: 6 PNFFSCNILLKSLWKEGRSSEAEKLLQKMIEKSYNLDIVTCNIIINGLCKSGKLDKAVKI 185
PN ++CN LL S+WKEG+ SEA++LLQKM E+ Y LD V+CNI+I+GLC++G++DKAV+I
Sbjct: 409 PNKYTCNTLLHSMWKEGKVSEAQQLLQKMNERGYGLDTVSCNIVIHGLCQTGEVDKAVEI 468
Query: 186 VNGMWQHGSAALGELGNAFLGLIDTSKHNK 275
V+ MW HGS ALG+LGN+F+ L++ + +
Sbjct: 469 VSEMWSHGSVALGDLGNSFMSLVNEDDNGR 498
>ref|XP_006422433.1| hypothetical protein CICLE_v10027787mg [Citrus clementina]
gi|557524367|gb|ESR35673.1| hypothetical protein
CICLE_v10027787mg [Citrus clementina]
Length = 889
Score = 119 bits (297), Expect = 5e-25
Identities = 59/90 (65%), Positives = 68/90 (75%)
Frame = +3
Query: 6 PNFFSCNILLKSLWKEGRSSEAEKLLQKMIEKSYNLDIVTCNIIINGLCKSGKLDKAVKI 185
P F+CNILL SL+KEGR SEAE LLQKM E+ Y+LD VTCNIII+GLC GKLDKA++I
Sbjct: 433 PTIFTCNILLHSLYKEGRISEAEDLLQKMNERGYDLDTVTCNIIIHGLCNCGKLDKAIEI 492
Query: 186 VNGMWQHGSAALGELGNAFLGLIDTSKHNK 275
VN MW GSAALG LGN F+ D + K
Sbjct: 493 VNEMWTKGSAALGNLGNFFVVPADDTNSKK 522
>ref|XP_006486600.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Citrus sinensis]
gi|568866524|ref|XP_006486605.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17140-like [Citrus sinensis]
Length = 889
Score = 118 bits (296), Expect = 7e-25
Identities = 59/90 (65%), Positives = 67/90 (74%)
Frame = +3
Query: 6 PNFFSCNILLKSLWKEGRSSEAEKLLQKMIEKSYNLDIVTCNIIINGLCKSGKLDKAVKI 185
P F+CNILL SL+KEGR SEAE LLQKM E+ Y LD VTCNIII+GLC GKLDKA++I
Sbjct: 433 PTIFTCNILLHSLYKEGRISEAEDLLQKMNERGYGLDTVTCNIIIHGLCNCGKLDKAIEI 492
Query: 186 VNGMWQHGSAALGELGNAFLGLIDTSKHNK 275
VN MW GSAALG LGN F+ D + K
Sbjct: 493 VNEMWTKGSAALGNLGNFFVVPADDTNSKK 522
>ref|XP_004231526.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Solanum lycopersicum]
Length = 837
Score = 117 bits (292), Expect = 2e-24
Identities = 50/90 (55%), Positives = 71/90 (78%)
Frame = +3
Query: 6 PNFFSCNILLKSLWKEGRSSEAEKLLQKMIEKSYNLDIVTCNIIINGLCKSGKLDKAVKI 185
PN ++CN LL S+WKEG+ SEA++LLQKM E+ Y LD V+CNI+I+GLC+ G++DKAV+I
Sbjct: 410 PNKYTCNTLLHSMWKEGKVSEAQQLLQKMNERGYGLDTVSCNIVIHGLCQIGEVDKAVEI 469
Query: 186 VNGMWQHGSAALGELGNAFLGLIDTSKHNK 275
V+ MW HGS ALG+ GN+ + L++ H +
Sbjct: 470 VSEMWSHGSIALGDFGNSLMSLVNEDDHGR 499