BLASTX nr result
ID: Zingiber23_contig00053685
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00053685
(325 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004303102.1| PREDICTED: putative E3 ubiquitin-protein lig... 108 1e-21
dbj|BAJ84907.1| predicted protein [Hordeum vulgare subsp. vulgare] 106 4e-21
ref|XP_004487268.1| PREDICTED: putative E3 ubiquitin-protein lig... 103 3e-20
ref|XP_003541903.1| PREDICTED: putative E3 ubiquitin-protein lig... 102 4e-20
ref|XP_002863599.1| predicted protein [Arabidopsis lyrata subsp.... 102 5e-20
ref|XP_006280312.1| hypothetical protein CARUB_v10026235mg [Caps... 101 9e-20
ref|XP_003539538.1| PREDICTED: putative E3 ubiquitin-protein lig... 101 9e-20
ref|XP_006469894.1| PREDICTED: putative E3 ubiquitin-protein lig... 100 2e-19
ref|XP_006447263.1| hypothetical protein CICLE_v10015083mg [Citr... 100 2e-19
ref|XP_006307390.1| hypothetical protein CARUB_v10009016mg [Caps... 100 2e-19
ref|XP_002328052.1| predicted protein [Populus trichocarpa] gi|5... 100 3e-19
dbj|BAB10113.1| unnamed protein product [Arabidopsis thaliana] 99 5e-19
ref|XP_006418205.1| hypothetical protein EUTSA_v10007494mg [Eutr... 99 5e-19
ref|NP_199241.2| putative E3 ubiquitin-protein ligase RING1a [Ar... 99 5e-19
ref|XP_006655452.1| PREDICTED: uncharacterized protein LOC102712... 99 6e-19
ref|XP_004505080.1| PREDICTED: putative E3 ubiquitin-protein lig... 99 6e-19
ref|XP_006582314.1| PREDICTED: putative E3 ubiquitin-protein lig... 98 1e-18
ref|XP_003526270.1| PREDICTED: putative E3 ubiquitin-protein lig... 98 1e-18
gb|EEC79461.1| hypothetical protein OsI_20471 [Oryza sativa Indi... 97 2e-18
gb|AAT44279.1| putative zinc finger protein [Oryza sativa Japoni... 97 2e-18
>ref|XP_004303102.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Fragaria vesca subsp. vesca]
Length = 493
Score = 108 bits (269), Expect = 1e-21
Identities = 58/109 (53%), Positives = 71/109 (65%), Gaps = 5/109 (4%)
Frame = -3
Query: 314 MLQQKKDSGIEEAGDDAQTISEKELAQEAEERREDFYGRIDEVRSSDEEYDETNSP---- 147
+LQQ++ EE GD A ++E +E E ED DE DE YD SP
Sbjct: 38 LLQQQQQ---EEQGDVAAEQQQQEDEEEEEAVEEDGEANDDEEEEEDEAYDCDGSPSQEK 94
Query: 146 -EFLFVKVADVREIVRCPICLGIIRKTRTVMECLHRFCRECIDKSMRLG 3
EF+ V++ D+R+ V CPICLGII+KTRTVMECLHRFCRECIDKSMR+G
Sbjct: 95 PEFVLVQLPDIRKDVHCPICLGIIKKTRTVMECLHRFCRECIDKSMRMG 143
>dbj|BAJ84907.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 443
Score = 106 bits (264), Expect = 4e-21
Identities = 55/101 (54%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
Frame = -3
Query: 299 KDSGIEEAGDDAQTISEKELAQEAEERREDFYGRIDEVR--SSDEEYDETNSPEFLFVKV 126
KD G +AG+D E+E +E E G DE S E D + EF+ VK+
Sbjct: 54 KDGGDSDAGEDEDDEEEEERKKENEHEEGGGSGGDDENGDDSQSSESDAADMDEFILVKL 113
Query: 125 ADVREIVRCPICLGIIRKTRTVMECLHRFCRECIDKSMRLG 3
D+R+ V+CPICLGIIRKTRTVMECLHRFCR+CIDKSMRLG
Sbjct: 114 MDIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLG 154
>ref|XP_004487268.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like [Cicer
arietinum]
Length = 514
Score = 103 bits (256), Expect = 3e-20
Identities = 51/108 (47%), Positives = 72/108 (66%), Gaps = 6/108 (5%)
Frame = -3
Query: 308 QQKKDSGIEEAGDDAQTISEKELAQEAEERREDFYGRIDEVRSSDEEYDETNS------P 147
+ ++D EE GD+ + + + E E+ ED ++ ++ DET S P
Sbjct: 61 EDEEDEQGEEEGDEEEAEDDDDDDDEDEDEDEDEGKNHNDDNEKSQDSDETPSSDSEEKP 120
Query: 146 EFLFVKVADVREIVRCPICLGIIRKTRTVMECLHRFCRECIDKSMRLG 3
E+++V++ D+R+ V+CPICLGII+KTRTVMECLHRFCRECIDKSMRLG
Sbjct: 121 EYVYVELQDIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG 168
>ref|XP_003541903.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Glycine max]
Length = 501
Score = 102 bits (255), Expect = 4e-20
Identities = 51/104 (49%), Positives = 70/104 (67%), Gaps = 10/104 (9%)
Frame = -3
Query: 284 EEAGDDAQTISEKELAQEAEERREDFYGRIDEVRSSDEEYDETNS----------PEFLF 135
EE GD+ + E+E +E EE E+ + ++DEE + + PEF++
Sbjct: 54 EEEGDEEEGEEEEEEEEEEEEEEEEEVEEAAQNDNNDEEKPQDSDDIPSSGSEEKPEFVY 113
Query: 134 VKVADVREIVRCPICLGIIRKTRTVMECLHRFCRECIDKSMRLG 3
V++ ++R+ V+CPICLGII+KTRTVMECLHRFCRECIDKSMRLG
Sbjct: 114 VELLEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG 157
>ref|XP_002863599.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309434|gb|EFH39858.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 516
Score = 102 bits (254), Expect = 5e-20
Identities = 53/110 (48%), Positives = 72/110 (65%), Gaps = 6/110 (5%)
Frame = -3
Query: 314 MLQQKKDSGIEEAGDDAQTISEKELAQEAEERREDFYGRIDEVRSSDEEYDETNSP---- 147
M+ + + EE GD+ + E+E A E EE E+ +E DEE +++ S
Sbjct: 58 MIPNEAEEEEEEDGDEKEEEEEEEEAAEEEEEEEEE----EEEEEEDEEEEDSKSSISGD 113
Query: 146 --EFLFVKVADVREIVRCPICLGIIRKTRTVMECLHRFCRECIDKSMRLG 3
EF+ + + ++R+ V+CPICLGII+KTRTVMECLHRFCRECIDKSMRLG
Sbjct: 114 QSEFMEIDLGEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG 163
>ref|XP_006280312.1| hypothetical protein CARUB_v10026235mg [Capsella rubella]
gi|482549016|gb|EOA13210.1| hypothetical protein
CARUB_v10026235mg [Capsella rubella]
Length = 516
Score = 101 bits (252), Expect = 9e-20
Identities = 52/111 (46%), Positives = 69/111 (62%), Gaps = 17/111 (15%)
Frame = -3
Query: 284 EEAGDDAQTISEKELAQEAEERREDFYGRIDEVRSSDEEYDE-----------------T 156
EE DD + +EKE+ +E EE E+ +E +EE +E
Sbjct: 54 EEEDDDDEEDAEKEVEEEEEEEEEEEDEEEEEEEEEEEEDEEEDEEEESKERRSPSSMSA 113
Query: 155 NSPEFLFVKVADVREIVRCPICLGIIRKTRTVMECLHRFCRECIDKSMRLG 3
+ PEF+ + + ++R+ V+CPICLGII+KTRTVMECLHRFCRECIDKSMRLG
Sbjct: 114 DQPEFMEIGLGEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG 164
>ref|XP_003539538.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Glycine max]
Length = 500
Score = 101 bits (252), Expect = 9e-20
Identities = 50/108 (46%), Positives = 73/108 (67%), Gaps = 6/108 (5%)
Frame = -3
Query: 308 QQKKDSGIEEAGDDAQTISEKELAQEAEERREDFYGRIDEVRSSDEEYDETNS------P 147
++ +D EE ++ + E++ +E EE E+ + + ++ DET S P
Sbjct: 47 EEGEDGEEEEGEEEGEGEGEEDEEEEEEEEVEEAAQHDNNDKEKPQDSDETPSSGSEEKP 106
Query: 146 EFLFVKVADVREIVRCPICLGIIRKTRTVMECLHRFCRECIDKSMRLG 3
EF++V++ ++R+ V+CPICLGII+KTRTVMECLHRFCRECIDKSMRLG
Sbjct: 107 EFVYVELLEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG 154
>ref|XP_006469894.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like isoform
X2 [Citrus sinensis]
Length = 476
Score = 100 bits (249), Expect = 2e-19
Identities = 55/103 (53%), Positives = 71/103 (68%)
Frame = -3
Query: 311 LQQKKDSGIEEAGDDAQTISEKELAQEAEERREDFYGRIDEVRSSDEEYDETNSPEFLFV 132
LQQ + +EE D + + E E +E EE +D G SSD ++ PEF+FV
Sbjct: 48 LQQNEQQQLEEDQKDDEEV-EGEGDEEDEENEDDSEGP-----SSDTSGEK---PEFVFV 98
Query: 131 KVADVREIVRCPICLGIIRKTRTVMECLHRFCRECIDKSMRLG 3
++ ++R+ V+CPICLGII+KTRTVMECLHRFCRECIDKSMRLG
Sbjct: 99 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG 141
>ref|XP_006447263.1| hypothetical protein CICLE_v10015083mg [Citrus clementina]
gi|568831268|ref|XP_006469893.1| PREDICTED: putative E3
ubiquitin-protein ligase RING1a-like isoform X1 [Citrus
sinensis] gi|557549874|gb|ESR60503.1| hypothetical
protein CICLE_v10015083mg [Citrus clementina]
Length = 481
Score = 100 bits (249), Expect = 2e-19
Identities = 55/103 (53%), Positives = 71/103 (68%)
Frame = -3
Query: 311 LQQKKDSGIEEAGDDAQTISEKELAQEAEERREDFYGRIDEVRSSDEEYDETNSPEFLFV 132
LQQ + +EE D + + E E +E EE +D G SSD ++ PEF+FV
Sbjct: 48 LQQNEQQQLEEDQKDDEEV-EGEGDEEDEENEDDSEGP-----SSDTSGEK---PEFVFV 98
Query: 131 KVADVREIVRCPICLGIIRKTRTVMECLHRFCRECIDKSMRLG 3
++ ++R+ V+CPICLGII+KTRTVMECLHRFCRECIDKSMRLG
Sbjct: 99 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG 141
>ref|XP_006307390.1| hypothetical protein CARUB_v10009016mg [Capsella rubella]
gi|482576101|gb|EOA40288.1| hypothetical protein
CARUB_v10009016mg [Capsella rubella]
Length = 478
Score = 100 bits (249), Expect = 2e-19
Identities = 50/101 (49%), Positives = 67/101 (66%)
Frame = -3
Query: 305 QKKDSGIEEAGDDAQTISEKELAQEAEERREDFYGRIDEVRSSDEEYDETNSPEFLFVKV 126
+K D EE+GD+A + ++ E EE E+ + + S E + E++ V +
Sbjct: 38 EKMDDNKEESGDEADDVKRDQVEAEDEEALEE--DSKERSQPSSGPGGEQSDSEYIDVDL 95
Query: 125 ADVREIVRCPICLGIIRKTRTVMECLHRFCRECIDKSMRLG 3
AD+R V+CPICLGII+KTRTVMECLHRFC+ECIDKSMRLG
Sbjct: 96 ADIRREVQCPICLGIIKKTRTVMECLHRFCQECIDKSMRLG 136
>ref|XP_002328052.1| predicted protein [Populus trichocarpa]
gi|566211348|ref|XP_006372726.1| zinc finger family
protein [Populus trichocarpa]
gi|550319374|gb|ERP50523.1| zinc finger family protein
[Populus trichocarpa]
Length = 497
Score = 99.8 bits (247), Expect = 3e-19
Identities = 52/109 (47%), Positives = 70/109 (64%), Gaps = 7/109 (6%)
Frame = -3
Query: 308 QQKKDSGIEEAGDDAQTISEKELAQEA------EERREDFYGRID-EVRSSDEEYDETNS 150
Q++ + G EE Q + ++E E EE +E+ G SS ++
Sbjct: 57 QEEGEEGEEEVDIKEQEVQKEEEGVEGGGGGDGEEGKEESDGTQSFSSSSSSSSCEDEEK 116
Query: 149 PEFLFVKVADVREIVRCPICLGIIRKTRTVMECLHRFCRECIDKSMRLG 3
PEF+FV++ D+R+ V+CPICLGII+KTRTVMECLHRFCRECIDKSMR+G
Sbjct: 117 PEFVFVELPDIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRMG 165
>dbj|BAB10113.1| unnamed protein product [Arabidopsis thaliana]
Length = 486
Score = 99.4 bits (246), Expect = 5e-19
Identities = 49/105 (46%), Positives = 69/105 (65%), Gaps = 7/105 (6%)
Frame = -3
Query: 296 DSGIEEAGDDAQTISEKELAQEAEERREDFYGRIDEVRSSDEEYDETN-------SPEFL 138
D+ ++ GDDA+ E+E+ E +E E+ +E +E+ E + EF+
Sbjct: 64 DAEEDDDGDDAEEDEEEEVEAEEDEEAEEEEEEEEEEEEEEEDSKERSPSSISGDQSEFM 123
Query: 137 FVKVADVREIVRCPICLGIIRKTRTVMECLHRFCRECIDKSMRLG 3
+ + ++R+ V+CPICLGII+KTRTVMECLHRFCRECIDKSMRLG
Sbjct: 124 EIDLGEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG 168
>ref|XP_006418205.1| hypothetical protein EUTSA_v10007494mg [Eutrema salsugineum]
gi|557095976|gb|ESQ36558.1| hypothetical protein
EUTSA_v10007494mg [Eutrema salsugineum]
Length = 485
Score = 99.4 bits (246), Expect = 5e-19
Identities = 50/102 (49%), Positives = 65/102 (63%)
Frame = -3
Query: 308 QQKKDSGIEEAGDDAQTISEKELAQEAEERREDFYGRIDEVRSSDEEYDETNSPEFLFVK 129
+ + G EE DD E+E EAE+ E + RS +E + E++ ++
Sbjct: 46 EDDNEGGDEEVEDDVTRDEEEEEEVEAEDE-EALDEEDSKERSQSSTSEELSESEYMDIE 104
Query: 128 VADVREIVRCPICLGIIRKTRTVMECLHRFCRECIDKSMRLG 3
+ D+R V+CPICLGII+KTRTVMECLHRFCRECIDKSMRLG
Sbjct: 105 LGDIRRDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG 146
>ref|NP_199241.2| putative E3 ubiquitin-protein ligase RING1a [Arabidopsis thaliana]
gi|302425246|sp|Q9FKW0.2|RNG1A_ARATH RecName:
Full=Putative E3 ubiquitin-protein ligase RING1a;
AltName: Full=Polycomb complex protein RING1a; AltName:
Full=Protein RING1a; Short=AtRING1a; AltName: Full=Ring
finger protein 434 gi|332007702|gb|AED95085.1| putative
E3 ubiquitin-protein ligase RING1a [Arabidopsis
thaliana]
Length = 522
Score = 99.4 bits (246), Expect = 5e-19
Identities = 49/105 (46%), Positives = 69/105 (65%), Gaps = 7/105 (6%)
Frame = -3
Query: 296 DSGIEEAGDDAQTISEKELAQEAEERREDFYGRIDEVRSSDEEYDETN-------SPEFL 138
D+ ++ GDDA+ E+E+ E +E E+ +E +E+ E + EF+
Sbjct: 64 DAEEDDDGDDAEEDEEEEVEAEEDEEAEEEEEEEEEEEEEEEDSKERSPSSISGDQSEFM 123
Query: 137 FVKVADVREIVRCPICLGIIRKTRTVMECLHRFCRECIDKSMRLG 3
+ + ++R+ V+CPICLGII+KTRTVMECLHRFCRECIDKSMRLG
Sbjct: 124 EIDLGEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG 168
>ref|XP_006655452.1| PREDICTED: uncharacterized protein LOC102712087 [Oryza brachyantha]
Length = 870
Score = 99.0 bits (245), Expect = 6e-19
Identities = 47/83 (56%), Positives = 59/83 (71%)
Frame = -3
Query: 251 EKELAQEAEERREDFYGRIDEVRSSDEEYDETNSPEFLFVKVADVREIVRCPICLGIIRK 72
+++ +AEE G DE R S + + EF+ VK+ D+R+ V+CPICLGIIRK
Sbjct: 13 QRDADSDAEEEEGGGGGGGDEDRDSQSSESDGDMEEFILVKLMDIRKEVQCPICLGIIRK 72
Query: 71 TRTVMECLHRFCRECIDKSMRLG 3
TRTVMECLHRFCR+CIDKSMRLG
Sbjct: 73 TRTVMECLHRFCRDCIDKSMRLG 95
>ref|XP_004505080.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like [Cicer
arietinum]
Length = 426
Score = 99.0 bits (245), Expect = 6e-19
Identities = 54/91 (59%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Frame = -3
Query: 266 AQTISEKELAQEAE---ERREDFYGRIDEVRSSDEEYDETNSPEFLFVKVADVREIVRCP 96
AQ S E QE E E + D+ RSSD E +E E++ +K++DVR+ V+CP
Sbjct: 3 AQKRSHDEALQEIEINSEEQPKDEVESDQNRSSDSEEEEEE--EYVAIKLSDVRKEVQCP 60
Query: 95 ICLGIIRKTRTVMECLHRFCRECIDKSMRLG 3
ICLGIIRKTRTVMECLHRFCRECIDKSMRLG
Sbjct: 61 ICLGIIRKTRTVMECLHRFCRECIDKSMRLG 91
>ref|XP_006582314.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like isoform
X2 [Glycine max]
Length = 453
Score = 97.8 bits (242), Expect = 1e-18
Identities = 50/99 (50%), Positives = 66/99 (66%), Gaps = 5/99 (5%)
Frame = -3
Query: 284 EEAGDDAQTISEKELAQEAEERREDFYGRIDEVRSSDEEYDETNSP-----EFLFVKVAD 120
EEA + + E+E AQ+ ++ E E D Y +SP E++FV++ +
Sbjct: 24 EEAKTEEEEEEEEEEAQQQQQHDE-------EEEEEDNNYKSDDSPPEDKSEYVFVELLE 76
Query: 119 VREIVRCPICLGIIRKTRTVMECLHRFCRECIDKSMRLG 3
+R+ V+CPICLGII+KTRTVMECLHRFCRECIDKSMRLG
Sbjct: 77 IRKEVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG 115
>ref|XP_003526270.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like isoform
X1 [Glycine max]
Length = 455
Score = 97.8 bits (242), Expect = 1e-18
Identities = 50/99 (50%), Positives = 66/99 (66%), Gaps = 5/99 (5%)
Frame = -3
Query: 284 EEAGDDAQTISEKELAQEAEERREDFYGRIDEVRSSDEEYDETNSP-----EFLFVKVAD 120
EEA + + E+E AQ+ ++ E E D Y +SP E++FV++ +
Sbjct: 24 EEAKTEEEEEEEEEEAQQQQQHDE-------EEEEEDNNYKSDDSPPEDKSEYVFVELLE 76
Query: 119 VREIVRCPICLGIIRKTRTVMECLHRFCRECIDKSMRLG 3
+R+ V+CPICLGII+KTRTVMECLHRFCRECIDKSMRLG
Sbjct: 77 IRKEVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG 115
>gb|EEC79461.1| hypothetical protein OsI_20471 [Oryza sativa Indica Group]
Length = 451
Score = 97.4 bits (241), Expect = 2e-18
Identities = 49/100 (49%), Positives = 63/100 (63%), Gaps = 5/100 (5%)
Frame = -3
Query: 287 IEEAGDDAQTISEKELAQEAEERREDFYGR-----IDEVRSSDEEYDETNSPEFLFVKVA 123
+ G + ++ +AEE E+ G DE R S + + EF+ VK+
Sbjct: 47 VMNGGGPEKEKERRDADSDAEEEEEEAGGGGGGGGADEDRDSPSSESDGDMDEFILVKLM 106
Query: 122 DVREIVRCPICLGIIRKTRTVMECLHRFCRECIDKSMRLG 3
D+R+ V+CPICLGIIRKTRTVMECLHRFCR+CIDKSMRLG
Sbjct: 107 DIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLG 146
>gb|AAT44279.1| putative zinc finger protein [Oryza sativa Japonica Group]
Length = 823
Score = 97.4 bits (241), Expect = 2e-18
Identities = 49/100 (49%), Positives = 63/100 (63%), Gaps = 5/100 (5%)
Frame = -3
Query: 287 IEEAGDDAQTISEKELAQEAEERREDFYGR-----IDEVRSSDEEYDETNSPEFLFVKVA 123
+ G + ++ +AEE E+ G DE R S + + EF+ VK+
Sbjct: 47 VMNGGGPEKEKERRDADSDAEEEEEEAGGGGGGGGADEDRDSPSSESDGDMDEFILVKLM 106
Query: 122 DVREIVRCPICLGIIRKTRTVMECLHRFCRECIDKSMRLG 3
D+R+ V+CPICLGIIRKTRTVMECLHRFCR+CIDKSMRLG
Sbjct: 107 DIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLG 146