BLASTX nr result
ID: Zingiber23_contig00052997
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00052997
(276 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT20827.1| DNA polymerase epsilon catalytic subunit A [Aegil... 152 4e-35
gb|EMS53029.1| DNA polymerase epsilon catalytic subunit A [Triti... 152 4e-35
gb|AFW71551.1| putative DNA polymerase epsilon catalytic subunit... 152 6e-35
gb|AFW71549.1| putative DNA polymerase epsilon catalytic subunit... 152 6e-35
ref|XP_003572557.1| PREDICTED: DNA polymerase epsilon catalytic ... 152 6e-35
ref|XP_006349108.1| PREDICTED: DNA polymerase epsilon catalytic ... 151 8e-35
ref|XP_002452153.1| hypothetical protein SORBIDRAFT_04g020730 [S... 151 1e-34
ref|XP_004952565.1| PREDICTED: DNA polymerase epsilon catalytic ... 150 2e-34
ref|XP_004251038.1| PREDICTED: DNA polymerase epsilon catalytic ... 149 3e-34
ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p... 148 6e-34
dbj|BAD23092.1| putative DNA polymerase epsilon catalytic subuni... 147 2e-33
ref|NP_001046939.2| Os02g0511900 [Oryza sativa Japonica Group] g... 147 2e-33
gb|EEC73256.1| hypothetical protein OsI_07377 [Oryza sativa Indi... 147 2e-33
ref|XP_006648668.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymera... 146 2e-33
ref|XP_006417712.1| hypothetical protein EUTSA_v10006524mg [Eutr... 145 4e-33
ref|XP_006384633.1| DNA-directed DNA polymerase epsilon catalyti... 145 4e-33
ref|XP_002328167.1| predicted protein [Populus trichocarpa] 145 4e-33
gb|EEE57064.1| hypothetical protein OsJ_06880 [Oryza sativa Japo... 145 5e-33
ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ... 143 2e-32
emb|CBI17056.3| unnamed protein product [Vitis vinifera] 143 2e-32
>gb|EMT20827.1| DNA polymerase epsilon catalytic subunit A [Aegilops tauschii]
Length = 1689
Score = 152 bits (384), Expect = 4e-35
Identities = 68/91 (74%), Positives = 82/91 (90%)
Frame = +3
Query: 3 GHFYAWIVVNGIMHKIPLKIPRVFYLNSKAPITEDFPGRRVKKILPHGKPNYNLIEVVIT 182
G F+AW+V GIM KIP+ +PRVFYLNSKAPIT++FPGRRVKKILPHGKP++NLIEVV +
Sbjct: 1377 GRFFAWVVAEGIMFKIPINVPRVFYLNSKAPITDEFPGRRVKKILPHGKPSFNLIEVVTS 1436
Query: 183 EEQFRAESKKFAALLADPEIEGIYETKVPLE 275
EEQFRAE +K AA LA+P++EGIYETK+PLE
Sbjct: 1437 EEQFRAEGRKLAAHLAEPDVEGIYETKIPLE 1467
>gb|EMS53029.1| DNA polymerase epsilon catalytic subunit A [Triticum urartu]
Length = 1646
Score = 152 bits (384), Expect = 4e-35
Identities = 68/91 (74%), Positives = 82/91 (90%)
Frame = +3
Query: 3 GHFYAWIVVNGIMHKIPLKIPRVFYLNSKAPITEDFPGRRVKKILPHGKPNYNLIEVVIT 182
G F+AW+V GIM KIP+ +PRVFYLNSKAPIT++FPGRRVKKILPHGKP++NLIEVV +
Sbjct: 1334 GRFFAWVVAEGIMFKIPINVPRVFYLNSKAPITDEFPGRRVKKILPHGKPSFNLIEVVTS 1393
Query: 183 EEQFRAESKKFAALLADPEIEGIYETKVPLE 275
EEQFRAE +K AA LA+P++EGIYETK+PLE
Sbjct: 1394 EEQFRAEGRKLAAHLAEPDVEGIYETKIPLE 1424
>gb|AFW71551.1| putative DNA polymerase epsilon catalytic subunit family protein [Zea
mays]
Length = 1717
Score = 152 bits (383), Expect = 6e-35
Identities = 68/91 (74%), Positives = 80/91 (87%)
Frame = +3
Query: 3 GHFYAWIVVNGIMHKIPLKIPRVFYLNSKAPITEDFPGRRVKKILPHGKPNYNLIEVVIT 182
GHF+AW+V GIM KIP+ +PR FYLNSKAP+TE+FPGRRVKKILPHG+P +NLIEVV T
Sbjct: 848 GHFFAWVVAEGIMFKIPINVPRTFYLNSKAPVTEEFPGRRVKKILPHGRPCFNLIEVVTT 907
Query: 183 EEQFRAESKKFAALLADPEIEGIYETKVPLE 275
EEQFRAE KK AA LA+P++EGIYETK+P E
Sbjct: 908 EEQFRAEGKKLAAHLAEPDVEGIYETKIPPE 938
>gb|AFW71549.1| putative DNA polymerase epsilon catalytic subunit family protein [Zea
mays]
Length = 1856
Score = 152 bits (383), Expect = 6e-35
Identities = 68/91 (74%), Positives = 80/91 (87%)
Frame = +3
Query: 3 GHFYAWIVVNGIMHKIPLKIPRVFYLNSKAPITEDFPGRRVKKILPHGKPNYNLIEVVIT 182
GHF+AW+V GIM KIP+ +PR FYLNSKAP+TE+FPGRRVKKILPHG+P +NLIEVV T
Sbjct: 987 GHFFAWVVAEGIMFKIPINVPRTFYLNSKAPVTEEFPGRRVKKILPHGRPCFNLIEVVTT 1046
Query: 183 EEQFRAESKKFAALLADPEIEGIYETKVPLE 275
EEQFRAE KK AA LA+P++EGIYETK+P E
Sbjct: 1047 EEQFRAEGKKLAAHLAEPDVEGIYETKIPPE 1077
>ref|XP_003572557.1| PREDICTED: DNA polymerase epsilon catalytic subunit A [Brachypodium
distachyon]
Length = 2127
Score = 152 bits (383), Expect = 6e-35
Identities = 68/91 (74%), Positives = 82/91 (90%)
Frame = +3
Query: 3 GHFYAWIVVNGIMHKIPLKIPRVFYLNSKAPITEDFPGRRVKKILPHGKPNYNLIEVVIT 182
G F+AW+V +GIM KIP+ +PRVFYLNSKAP+TE+FPGRRVKKILPHG+P +NLIEVV +
Sbjct: 1253 GRFFAWVVADGIMFKIPINVPRVFYLNSKAPVTEEFPGRRVKKILPHGRPCFNLIEVVTS 1312
Query: 183 EEQFRAESKKFAALLADPEIEGIYETKVPLE 275
EEQFRAE KK AA LA+P++EGIYETK+PLE
Sbjct: 1313 EEQFRAEGKKLAAHLAEPDVEGIYETKIPLE 1343
>ref|XP_006349108.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Solanum
tuberosum]
Length = 2218
Score = 151 bits (382), Expect = 8e-35
Identities = 70/91 (76%), Positives = 81/91 (89%)
Frame = +3
Query: 3 GHFYAWIVVNGIMHKIPLKIPRVFYLNSKAPITEDFPGRRVKKILPHGKPNYNLIEVVIT 182
G F+AW+VV G+MHKI + IPRVFYLNSKAPITE+FPGRRV KILPHG+ +YNLIEV I
Sbjct: 1330 GQFFAWVVVEGVMHKISVTIPRVFYLNSKAPITEEFPGRRVNKILPHGRHSYNLIEVTID 1389
Query: 183 EEQFRAESKKFAALLADPEIEGIYETKVPLE 275
E+QF++ESKK AA LADPE+EGIYETKVPLE
Sbjct: 1390 EDQFKSESKKLAAHLADPEVEGIYETKVPLE 1420
>ref|XP_002452153.1| hypothetical protein SORBIDRAFT_04g020730 [Sorghum bicolor]
gi|241931984|gb|EES05129.1| hypothetical protein
SORBIDRAFT_04g020730 [Sorghum bicolor]
Length = 2135
Score = 151 bits (381), Expect = 1e-34
Identities = 67/89 (75%), Positives = 79/89 (88%)
Frame = +3
Query: 3 GHFYAWIVVNGIMHKIPLKIPRVFYLNSKAPITEDFPGRRVKKILPHGKPNYNLIEVVIT 182
GHF+AW+V GIM KIP+ +PR FYLNSKAP+TE+FPGRRVKKILPHG+P +NLIEVV T
Sbjct: 1264 GHFFAWVVAEGIMFKIPINVPRTFYLNSKAPVTEEFPGRRVKKILPHGRPCFNLIEVVTT 1323
Query: 183 EEQFRAESKKFAALLADPEIEGIYETKVP 269
EEQFRAE KK AA LA+P++EGIYETK+P
Sbjct: 1324 EEQFRAEGKKLAAHLAEPDVEGIYETKIP 1352
>ref|XP_004952565.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Setaria
italica]
Length = 2214
Score = 150 bits (379), Expect = 2e-34
Identities = 68/91 (74%), Positives = 80/91 (87%)
Frame = +3
Query: 3 GHFYAWIVVNGIMHKIPLKIPRVFYLNSKAPITEDFPGRRVKKILPHGKPNYNLIEVVIT 182
G F+AW+V GIM KIP+ +PRVFYLNSKAP+TE+FPGRRVKKILPHG+P +NLIEVV T
Sbjct: 1343 GRFFAWVVAEGIMFKIPINVPRVFYLNSKAPVTEEFPGRRVKKILPHGRPCFNLIEVVTT 1402
Query: 183 EEQFRAESKKFAALLADPEIEGIYETKVPLE 275
EEQFRAE KK AA LA+P++EGIYETK+P E
Sbjct: 1403 EEQFRAEGKKLAAHLAEPDVEGIYETKIPPE 1433
>ref|XP_004251038.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Solanum
lycopersicum]
Length = 2220
Score = 149 bits (377), Expect = 3e-34
Identities = 69/91 (75%), Positives = 80/91 (87%)
Frame = +3
Query: 3 GHFYAWIVVNGIMHKIPLKIPRVFYLNSKAPITEDFPGRRVKKILPHGKPNYNLIEVVIT 182
G F+AW+VV G+MHKI + IPRVFYLNSKAPITE+FPGRRV KILPHG+ +YNLIEV I
Sbjct: 1330 GQFFAWVVVEGVMHKISVTIPRVFYLNSKAPITEEFPGRRVNKILPHGRHSYNLIEVTID 1389
Query: 183 EEQFRAESKKFAALLADPEIEGIYETKVPLE 275
E+QF++ESKK AA LADPE+EGIYE KVPLE
Sbjct: 1390 EDQFKSESKKLAAHLADPEVEGIYEAKVPLE 1420
>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
communis] gi|223531477|gb|EEF33309.1| DNA polymerase
epsilon, catalytic subunit, putative [Ricinus communis]
Length = 2227
Score = 148 bits (374), Expect = 6e-34
Identities = 67/91 (73%), Positives = 80/91 (87%)
Frame = +3
Query: 3 GHFYAWIVVNGIMHKIPLKIPRVFYLNSKAPITEDFPGRRVKKILPHGKPNYNLIEVVIT 182
G F+AW+VV GIM K+P+ +PRVFYLNSKAPITE FPGRRV K LPHG+ +YNL+EV+I
Sbjct: 1341 GEFFAWVVVEGIMLKVPITVPRVFYLNSKAPITEKFPGRRVNKTLPHGRHSYNLVEVIID 1400
Query: 183 EEQFRAESKKFAALLADPEIEGIYETKVPLE 275
E++F+ ESKK AALLADPE+EGIYETKVPLE
Sbjct: 1401 EDKFKKESKKLAALLADPEVEGIYETKVPLE 1431
>dbj|BAD23092.1| putative DNA polymerase epsilon catalytic subunit protein isoform b
[Oryza sativa Japonica Group]
Length = 2257
Score = 147 bits (370), Expect = 2e-33
Identities = 65/88 (73%), Positives = 78/88 (88%)
Frame = +3
Query: 3 GHFYAWIVVNGIMHKIPLKIPRVFYLNSKAPITEDFPGRRVKKILPHGKPNYNLIEVVIT 182
GHF+AW+V GIM KIP+ +PRVFYLNSKAP+TE+FPGRRVKKILPHG+P +NLIEVV +
Sbjct: 1399 GHFFAWVVAEGIMFKIPINVPRVFYLNSKAPVTEEFPGRRVKKILPHGRPCFNLIEVVTS 1458
Query: 183 EEQFRAESKKFAALLADPEIEGIYETKV 266
EEQFR E KK AA LA+P++EGIYETK+
Sbjct: 1459 EEQFRVEGKKLAAHLAEPDVEGIYETKI 1486
>ref|NP_001046939.2| Os02g0511900 [Oryza sativa Japonica Group]
gi|255670933|dbj|BAF08853.2| Os02g0511900 [Oryza sativa
Japonica Group]
Length = 2175
Score = 147 bits (370), Expect = 2e-33
Identities = 65/88 (73%), Positives = 78/88 (88%)
Frame = +3
Query: 3 GHFYAWIVVNGIMHKIPLKIPRVFYLNSKAPITEDFPGRRVKKILPHGKPNYNLIEVVIT 182
GHF+AW+V GIM KIP+ +PRVFYLNSKAP+TE+FPGRRVKKILPHG+P +NLIEVV +
Sbjct: 1259 GHFFAWVVAEGIMFKIPINVPRVFYLNSKAPVTEEFPGRRVKKILPHGRPCFNLIEVVTS 1318
Query: 183 EEQFRAESKKFAALLADPEIEGIYETKV 266
EEQFR E KK AA LA+P++EGIYETK+
Sbjct: 1319 EEQFRVEGKKLAAHLAEPDVEGIYETKI 1346
>gb|EEC73256.1| hypothetical protein OsI_07377 [Oryza sativa Indica Group]
Length = 2081
Score = 147 bits (370), Expect = 2e-33
Identities = 65/88 (73%), Positives = 78/88 (88%)
Frame = +3
Query: 3 GHFYAWIVVNGIMHKIPLKIPRVFYLNSKAPITEDFPGRRVKKILPHGKPNYNLIEVVIT 182
GHF+AW+V GIM KIP+ +PRVFYLNSKAP+TE+FPGRRVKKILPHG+P +NLIEVV +
Sbjct: 1207 GHFFAWVVAEGIMFKIPINVPRVFYLNSKAPVTEEFPGRRVKKILPHGRPCFNLIEVVTS 1266
Query: 183 EEQFRAESKKFAALLADPEIEGIYETKV 266
EEQFR E KK AA LA+P++EGIYETK+
Sbjct: 1267 EEQFRVEGKKLAAHLAEPDVEGIYETKI 1294
>ref|XP_006648668.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic
subunit A-like [Oryza brachyantha]
Length = 2187
Score = 146 bits (369), Expect = 2e-33
Identities = 65/91 (71%), Positives = 79/91 (86%)
Frame = +3
Query: 3 GHFYAWIVVNGIMHKIPLKIPRVFYLNSKAPITEDFPGRRVKKILPHGKPNYNLIEVVIT 182
G F+AW+V GIM KIP+ +PRVF+LNSKAP+TE+FPGRRVKKILPHG+P +NLIEVV +
Sbjct: 1259 GRFFAWVVAEGIMFKIPINVPRVFFLNSKAPVTEEFPGRRVKKILPHGRPCFNLIEVVTS 1318
Query: 183 EEQFRAESKKFAALLADPEIEGIYETKVPLE 275
EEQFR E KK AA LA+P++EGIYETK+P E
Sbjct: 1319 EEQFRVEGKKLAAHLAEPDVEGIYETKIPAE 1349
>ref|XP_006417712.1| hypothetical protein EUTSA_v10006524mg [Eutrema salsugineum]
gi|557095483|gb|ESQ36065.1| hypothetical protein
EUTSA_v10006524mg [Eutrema salsugineum]
Length = 2170
Score = 145 bits (367), Expect = 4e-33
Identities = 71/91 (78%), Positives = 77/91 (84%)
Frame = +3
Query: 3 GHFYAWIVVNGIMHKIPLKIPRVFYLNSKAPITEDFPGRRVKKILPHGKPNYNLIEVVIT 182
G F+AW+VV G+M KIPL IPRVFY+NSKAPI FPG+ V KILPHG+P YNLIEV I
Sbjct: 1312 GRFFAWVVVEGLMLKIPLTIPRVFYINSKAPIAGKFPGKCVNKILPHGRPCYNLIEVEIQ 1371
Query: 183 EEQFRAESKKFAALLADPEIEGIYETKVPLE 275
EEQFR ESKK AALLADPEIEGIYETKVPLE
Sbjct: 1372 EEQFRKESKKVAALLADPEIEGIYETKVPLE 1402
>ref|XP_006384633.1| DNA-directed DNA polymerase epsilon catalytic subunit family protein
[Populus trichocarpa] gi|550341401|gb|ERP62430.1|
DNA-directed DNA polymerase epsilon catalytic subunit
family protein [Populus trichocarpa]
Length = 2160
Score = 145 bits (367), Expect = 4e-33
Identities = 66/91 (72%), Positives = 79/91 (86%)
Frame = +3
Query: 3 GHFYAWIVVNGIMHKIPLKIPRVFYLNSKAPITEDFPGRRVKKILPHGKPNYNLIEVVIT 182
G F+AW+VV GIM KIP+ IPR FYLN+KAP E+FPGRRV K LPHG+P+YNL+EV+I
Sbjct: 1273 GQFFAWVVVEGIMLKIPITIPRAFYLNAKAPAMENFPGRRVTKTLPHGRPSYNLVEVIID 1332
Query: 183 EEQFRAESKKFAALLADPEIEGIYETKVPLE 275
E++FR ESKK AALLADPE+EGIYE+KVPLE
Sbjct: 1333 EDKFRKESKKLAALLADPEVEGIYESKVPLE 1363
>ref|XP_002328167.1| predicted protein [Populus trichocarpa]
Length = 2221
Score = 145 bits (367), Expect = 4e-33
Identities = 66/91 (72%), Positives = 79/91 (86%)
Frame = +3
Query: 3 GHFYAWIVVNGIMHKIPLKIPRVFYLNSKAPITEDFPGRRVKKILPHGKPNYNLIEVVIT 182
G F+AW+VV GIM KIP+ IPR FYLN+KAP E+FPGRRV K LPHG+P+YNL+EV+I
Sbjct: 1334 GQFFAWVVVEGIMLKIPITIPRAFYLNAKAPAMENFPGRRVTKTLPHGRPSYNLVEVIID 1393
Query: 183 EEQFRAESKKFAALLADPEIEGIYETKVPLE 275
E++FR ESKK AALLADPE+EGIYE+KVPLE
Sbjct: 1394 EDKFRKESKKLAALLADPEVEGIYESKVPLE 1424
>gb|EEE57064.1| hypothetical protein OsJ_06880 [Oryza sativa Japonica Group]
Length = 2127
Score = 145 bits (366), Expect = 5e-33
Identities = 64/88 (72%), Positives = 78/88 (88%)
Frame = +3
Query: 3 GHFYAWIVVNGIMHKIPLKIPRVFYLNSKAPITEDFPGRRVKKILPHGKPNYNLIEVVIT 182
GHF+AW+V GIM KIP+ +PRVFYLNSKAP+TE+FPGRRVKKILPHG+P +NLIEVV +
Sbjct: 1253 GHFFAWVVAEGIMFKIPINVPRVFYLNSKAPVTEEFPGRRVKKILPHGRPCFNLIEVVTS 1312
Query: 183 EEQFRAESKKFAALLADPEIEGIYETKV 266
EEQFR E KK AA LA+P++EGI+ETK+
Sbjct: 1313 EEQFRVEGKKLAAHLAEPDVEGIFETKI 1340
>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
vinifera]
Length = 2214
Score = 143 bits (361), Expect = 2e-32
Identities = 65/91 (71%), Positives = 78/91 (85%)
Frame = +3
Query: 3 GHFYAWIVVNGIMHKIPLKIPRVFYLNSKAPITEDFPGRRVKKILPHGKPNYNLIEVVIT 182
G F+AW++V G+M KIP+ +PRVFYLNSKA ITE+FPGRRV K LPHG +YNLIE++I
Sbjct: 1337 GQFFAWVIVEGVMLKIPITVPRVFYLNSKALITEEFPGRRVNKTLPHGHHSYNLIEIIID 1396
Query: 183 EEQFRAESKKFAALLADPEIEGIYETKVPLE 275
E+QFR ES+K AA LADPE+EGIYETKVPLE
Sbjct: 1397 EDQFRGESRKLAAHLADPEVEGIYETKVPLE 1427
>emb|CBI17056.3| unnamed protein product [Vitis vinifera]
Length = 2723
Score = 143 bits (361), Expect = 2e-32
Identities = 65/91 (71%), Positives = 78/91 (85%)
Frame = +3
Query: 3 GHFYAWIVVNGIMHKIPLKIPRVFYLNSKAPITEDFPGRRVKKILPHGKPNYNLIEVVIT 182
G F+AW++V G+M KIP+ +PRVFYLNSKA ITE+FPGRRV K LPHG +YNLIE++I
Sbjct: 1743 GQFFAWVIVEGVMLKIPITVPRVFYLNSKALITEEFPGRRVNKTLPHGHHSYNLIEIIID 1802
Query: 183 EEQFRAESKKFAALLADPEIEGIYETKVPLE 275
E+QFR ES+K AA LADPE+EGIYETKVPLE
Sbjct: 1803 EDQFRGESRKLAAHLADPEVEGIYETKVPLE 1833