BLASTX nr result
ID: Zingiber23_contig00052914
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00052914
(341 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI35066.3| unnamed protein product [Vitis vinifera] 73 8e-13
ref|XP_002266804.1| PREDICTED: putative RING-H2 finger protein A... 73 8e-13
ref|XP_003522850.1| PREDICTED: putative RING-H2 finger protein A... 73 3e-12
ref|XP_003526340.1| PREDICTED: putative RING-H2 finger protein A... 70 2e-11
ref|XP_004499794.1| PREDICTED: putative RING-H2 finger protein A... 71 2e-11
ref|XP_004146803.1| PREDICTED: putative RING-H2 finger protein A... 70 3e-11
ref|XP_002525544.1| ring finger protein, putative [Ricinus commu... 70 4e-11
ref|XP_006494565.1| PREDICTED: putative RING-H2 finger protein A... 70 4e-11
ref|XP_006432382.1| hypothetical protein CICLE_v10003203mg [Citr... 70 4e-11
ref|XP_002299182.1| zinc finger family protein [Populus trichoca... 67 2e-10
gb|EMJ20292.1| hypothetical protein PRUPE_ppa015141mg [Prunus pe... 69 5e-10
ref|XP_002871246.1| zinc finger family protein [Arabidopsis lyra... 63 9e-10
ref|XP_002303951.1| predicted protein [Populus trichocarpa] gi|2... 65 1e-09
ref|NP_196321.1| putative RING-H2 finger protein [Arabidopsis th... 62 1e-09
ref|XP_006399182.1| hypothetical protein EUTSA_v10014903mg [Eutr... 62 2e-09
ref|XP_006836238.1| hypothetical protein AMTR_s00101p00120240 [A... 61 7e-09
ref|XP_006289981.1| hypothetical protein CARUB_v10003611mg [Caps... 59 9e-09
ref|XP_002277387.1| PREDICTED: putative RING-H2 finger protein A... 62 2e-08
ref|XP_002992199.1| hypothetical protein SELMODRAFT_186618 [Sela... 64 2e-08
gb|ABA95749.1| Kelch motif family protein [Oryza sativa Japonica... 64 2e-08
>emb|CBI35066.3| unnamed protein product [Vitis vinifera]
Length = 191
Score = 73.2 bits (178), Expect(2) = 8e-13
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = -2
Query: 289 SSPDCGHCFHAECVDEWLRVSATCPLCRXXXXXXXXXXXXXXPLSELIPLAAHAR 125
S P+C HCFHA+C+DEWLR+SATCP+CR PLSE++PLA HAR
Sbjct: 120 SIPECNHCFHADCIDEWLRMSATCPICRSSPAVSAAPTPLATPLSEVVPLAFHAR 174
Score = 25.8 bits (55), Expect(2) = 8e-13
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 339 GPCPICLAEYETGE 298
GPC ICL+EY E
Sbjct: 103 GPCSICLSEYRPNE 116
>ref|XP_002266804.1| PREDICTED: putative RING-H2 finger protein ATL69-like [Vitis
vinifera]
Length = 174
Score = 73.2 bits (178), Expect(2) = 8e-13
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = -2
Query: 289 SSPDCGHCFHAECVDEWLRVSATCPLCRXXXXXXXXXXXXXXPLSELIPLAAHAR 125
S P+C HCFHA+C+DEWLR+SATCP+CR PLSE++PLA HAR
Sbjct: 120 SIPECNHCFHADCIDEWLRMSATCPICRSSPAVSAAPTPLATPLSEVVPLAFHAR 174
Score = 25.8 bits (55), Expect(2) = 8e-13
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 339 GPCPICLAEYETGE 298
GPC ICL+EY E
Sbjct: 103 GPCSICLSEYRPNE 116
>ref|XP_003522850.1| PREDICTED: putative RING-H2 finger protein ATL69-like [Glycine max]
Length = 188
Score = 72.8 bits (177), Expect(2) = 3e-12
Identities = 32/53 (60%), Positives = 36/53 (67%)
Frame = -2
Query: 283 PDCGHCFHAECVDEWLRVSATCPLCRXXXXXXXXXXXXXXPLSELIPLAAHAR 125
P+C HCFHAECVDEWL+ SATCPLCR PLSE++PLA HAR
Sbjct: 136 PECRHCFHAECVDEWLKTSATCPLCRNSPAPSPLPAAAATPLSEIVPLAFHAR 188
Score = 24.3 bits (51), Expect(2) = 3e-12
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3
Query: 339 GPCPICLAEY 310
GPC ICL+EY
Sbjct: 117 GPCAICLSEY 126
>ref|XP_003526340.1| PREDICTED: putative RING-H2 finger protein ATL69-like [Glycine max]
Length = 185
Score = 70.1 bits (170), Expect(2) = 2e-11
Identities = 31/53 (58%), Positives = 36/53 (67%)
Frame = -2
Query: 283 PDCGHCFHAECVDEWLRVSATCPLCRXXXXXXXXXXXXXXPLSELIPLAAHAR 125
P+C HCFHAEC+DEWL++SATCPLCR PLSEL+PLA AR
Sbjct: 133 PECRHCFHAECIDEWLKMSATCPLCRNSPVPSPLPTPAATPLSELVPLAFDAR 185
Score = 24.3 bits (51), Expect(2) = 2e-11
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3
Query: 339 GPCPICLAEY 310
GPC ICL+EY
Sbjct: 114 GPCAICLSEY 123
>ref|XP_004499794.1| PREDICTED: putative RING-H2 finger protein ATL69-like [Cicer
arietinum]
Length = 175
Score = 70.9 bits (172), Expect(2) = 2e-11
Identities = 34/53 (64%), Positives = 36/53 (67%)
Frame = -2
Query: 283 PDCGHCFHAECVDEWLRVSATCPLCRXXXXXXXXXXXXXXPLSELIPLAAHAR 125
PDC HCFH ECVDEWLR+SATCPLCR PLSEL+PLA HAR
Sbjct: 127 PDCQHCFHVECVDEWLRMSATCPLCR----NSPAPSPIPTPLSELVPLAFHAR 175
Score = 23.1 bits (48), Expect(2) = 2e-11
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -3
Query: 339 GPCPICLAEY 310
GPC ICL++Y
Sbjct: 108 GPCAICLSDY 117
>ref|XP_004146803.1| PREDICTED: putative RING-H2 finger protein ATL69-like [Cucumis
sativus] gi|449516515|ref|XP_004165292.1| PREDICTED:
putative RING-H2 finger protein ATL69-like [Cucumis
sativus]
Length = 163
Score = 70.1 bits (170), Expect(2) = 3e-11
Identities = 32/53 (60%), Positives = 38/53 (71%)
Frame = -2
Query: 283 PDCGHCFHAECVDEWLRVSATCPLCRXXXXXXXXXXXXXXPLSELIPLAAHAR 125
PDC HCFH++CVD+WLR+SATCPLCR PLSEL+PLA+HAR
Sbjct: 115 PDCRHCFHSDCVDQWLRMSATCPLCR----NSPAPTPLATPLSELVPLASHAR 163
Score = 23.5 bits (49), Expect(2) = 3e-11
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -3
Query: 339 GPCPICLAEYE 307
GPC ICL++Y+
Sbjct: 96 GPCSICLSDYK 106
>ref|XP_002525544.1| ring finger protein, putative [Ricinus communis]
gi|223535123|gb|EEF36803.1| ring finger protein,
putative [Ricinus communis]
Length = 188
Score = 69.7 bits (169), Expect(2) = 4e-11
Identities = 31/53 (58%), Positives = 34/53 (64%)
Frame = -2
Query: 283 PDCGHCFHAECVDEWLRVSATCPLCRXXXXXXXXXXXXXXPLSELIPLAAHAR 125
PDC HCFHAECVDEWL +SATCPLCR PLSEL+P + H R
Sbjct: 136 PDCHHCFHAECVDEWLMMSATCPLCRNSPAPSAASTPIATPLSELVPFSFHPR 188
Score = 23.5 bits (49), Expect(2) = 4e-11
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 339 GPCPICLAEYE 307
GPC ICL +Y+
Sbjct: 117 GPCSICLCDYQ 127
>ref|XP_006494565.1| PREDICTED: putative RING-H2 finger protein ATL69-like [Citrus
sinensis]
Length = 184
Score = 70.1 bits (170), Expect(2) = 4e-11
Identities = 32/53 (60%), Positives = 38/53 (71%)
Frame = -2
Query: 283 PDCGHCFHAECVDEWLRVSATCPLCRXXXXXXXXXXXXXXPLSELIPLAAHAR 125
PDC HCFHA+CVDEWLR+SATCPLCR PL+E++PLA+HAR
Sbjct: 130 PDCHHCFHADCVDEWLRMSATCPLCR---------SSPATPLAEVVPLASHAR 173
Score = 23.1 bits (48), Expect(2) = 4e-11
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 339 GPCPICLAEYE 307
GPC ICL +Y+
Sbjct: 111 GPCSICLCDYK 121
>ref|XP_006432382.1| hypothetical protein CICLE_v10003203mg [Citrus clementina]
gi|557534504|gb|ESR45622.1| hypothetical protein
CICLE_v10003203mg [Citrus clementina]
Length = 176
Score = 70.1 bits (170), Expect(2) = 4e-11
Identities = 32/53 (60%), Positives = 38/53 (71%)
Frame = -2
Query: 283 PDCGHCFHAECVDEWLRVSATCPLCRXXXXXXXXXXXXXXPLSELIPLAAHAR 125
PDC HCFHA+CVDEWLR+SATCPLCR PL+E++PLA+HAR
Sbjct: 133 PDCHHCFHADCVDEWLRMSATCPLCR---------SSPATPLAEVVPLASHAR 176
Score = 23.1 bits (48), Expect(2) = 4e-11
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 339 GPCPICLAEYE 307
GPC ICL +Y+
Sbjct: 114 GPCSICLCDYK 124
>ref|XP_002299182.1| zinc finger family protein [Populus trichocarpa]
gi|222846440|gb|EEE83987.1| zinc finger family protein
[Populus trichocarpa]
Length = 164
Score = 66.6 bits (161), Expect(2) = 2e-10
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = -2
Query: 283 PDCGHCFHAECVDEWLRVSATCPLCRXXXXXXXXXXXXXXPLSELIPLAAHAR 125
PDC HCFHA+C+D WL++SATCPLCR PL+E++P A HAR
Sbjct: 112 PDCHHCFHADCIDGWLKMSATCPLCRNSPAPSKGPTPVTTPLAEVVPSAFHAR 164
Score = 23.9 bits (50), Expect(2) = 2e-10
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -3
Query: 339 GPCPICLAEYE 307
GPC ICL++Y+
Sbjct: 93 GPCSICLSDYQ 103
>gb|EMJ20292.1| hypothetical protein PRUPE_ppa015141mg [Prunus persica]
Length = 193
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = -2
Query: 283 PDCGHCFHAECVDEWLRVSATCPLCRXXXXXXXXXXXXXXPLSELIPLAAHAR 125
PDC HCFHAECVDEWLR+SATCP+CR PLS+L+PLA H+R
Sbjct: 145 PDCHHCFHAECVDEWLRMSATCPICR----NSPAPSVGPSPLSDLVPLAFHSR 193
>ref|XP_002871246.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317083|gb|EFH47505.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 159
Score = 62.8 bits (151), Expect(2) = 9e-10
Identities = 30/53 (56%), Positives = 33/53 (62%)
Frame = -2
Query: 283 PDCGHCFHAECVDEWLRVSATCPLCRXXXXXXXXXXXXXXPLSELIPLAAHAR 125
P+C HCFH +CVDEWLR SATCPLCR PLS+LIPLA R
Sbjct: 111 PECNHCFHTDCVDEWLRTSATCPLCR----NSPAPSRLATPLSDLIPLAFQIR 159
Score = 25.8 bits (55), Expect(2) = 9e-10
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 339 GPCPICLAEYETGE 298
GPC ICL +YE E
Sbjct: 92 GPCSICLCDYEARE 105
>ref|XP_002303951.1| predicted protein [Populus trichocarpa]
gi|224144358|ref|XP_002336133.1| predicted protein
[Populus trichocarpa]
Length = 180
Score = 65.1 bits (157), Expect(2) = 1e-09
Identities = 27/53 (50%), Positives = 35/53 (66%)
Frame = -2
Query: 283 PDCGHCFHAECVDEWLRVSATCPLCRXXXXXXXXXXXXXXPLSELIPLAAHAR 125
P C HCFHA+C+D WL+++ATCPLCR PL+E++PLA HAR
Sbjct: 128 PYCNHCFHADCIDGWLKMNATCPLCRNSPAPSKDSTPVATPLAEVVPLAFHAR 180
Score = 23.1 bits (48), Expect(2) = 1e-09
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -3
Query: 339 GPCPICLAEY 310
GPC ICL++Y
Sbjct: 109 GPCSICLSDY 118
>ref|NP_196321.1| putative RING-H2 finger protein [Arabidopsis thaliana]
gi|68565291|sp|Q9FL42.1|ATL69_ARATH RecName:
Full=Putative RING-H2 finger protein ATL69
gi|9759560|dbj|BAB11162.1| C3HC4-type RING zinc finger
protein-like [Arabidopsis thaliana]
gi|332003718|gb|AED91101.1| putative RING-H2 finger
protein [Arabidopsis thaliana]
Length = 159
Score = 62.4 bits (150), Expect(2) = 1e-09
Identities = 29/53 (54%), Positives = 33/53 (62%)
Frame = -2
Query: 283 PDCGHCFHAECVDEWLRVSATCPLCRXXXXXXXXXXXXXXPLSELIPLAAHAR 125
P+C HCFH +CVDEWLR SATCPLCR PLS+L+PLA R
Sbjct: 111 PECNHCFHTDCVDEWLRTSATCPLCR----NSPAPSRLATPLSDLVPLAFQIR 159
Score = 25.8 bits (55), Expect(2) = 1e-09
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 339 GPCPICLAEYETGE 298
GPC ICL +YE E
Sbjct: 92 GPCSICLCDYEARE 105
>ref|XP_006399182.1| hypothetical protein EUTSA_v10014903mg [Eutrema salsugineum]
gi|557100272|gb|ESQ40635.1| hypothetical protein
EUTSA_v10014903mg [Eutrema salsugineum]
Length = 157
Score = 62.4 bits (150), Expect(2) = 2e-09
Identities = 29/53 (54%), Positives = 33/53 (62%)
Frame = -2
Query: 283 PDCGHCFHAECVDEWLRVSATCPLCRXXXXXXXXXXXXXXPLSELIPLAAHAR 125
P+C HCFHA+CVDEWLR SATCPLCR PLS+ +PLA R
Sbjct: 109 PECNHCFHADCVDEWLRTSATCPLCR----NSPAPSTLATPLSDFVPLAFQIR 157
Score = 25.0 bits (53), Expect(2) = 2e-09
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -3
Query: 339 GPCPICLAEYE 307
GPC ICL++YE
Sbjct: 90 GPCSICLSDYE 100
>ref|XP_006836238.1| hypothetical protein AMTR_s00101p00120240 [Amborella trichopoda]
gi|548838738|gb|ERM99091.1| hypothetical protein
AMTR_s00101p00120240 [Amborella trichopoda]
Length = 172
Score = 61.2 bits (147), Expect(2) = 7e-09
Identities = 25/51 (49%), Positives = 31/51 (60%)
Frame = -2
Query: 283 PDCGHCFHAECVDEWLRVSATCPLCRXXXXXXXXXXXXXXPLSELIPLAAH 131
PDC HCFH C+D WLR++ +CP+CR PLSEL+PLA H
Sbjct: 121 PDCLHCFHVSCIDGWLRLNGSCPVCRNSPIPSPIPTPIPTPLSELVPLAVH 171
Score = 24.3 bits (51), Expect(2) = 7e-09
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 333 CPICLAEYETGE 298
CPICL E+ GE
Sbjct: 104 CPICLGEFRKGE 115
>ref|XP_006289981.1| hypothetical protein CARUB_v10003611mg [Capsella rubella]
gi|482558687|gb|EOA22879.1| hypothetical protein
CARUB_v10003611mg [Capsella rubella]
Length = 161
Score = 59.3 bits (142), Expect(2) = 9e-09
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = -2
Query: 283 PDCGHCFHAECVDEWLRVSATCPLCR 206
P+C HCFH +CVDEWLR SATCPLCR
Sbjct: 113 PECNHCFHTDCVDEWLRTSATCPLCR 138
Score = 25.8 bits (55), Expect(2) = 9e-09
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 339 GPCPICLAEYETGE 298
GPC ICL +YE E
Sbjct: 94 GPCSICLCDYEARE 107
>ref|XP_002277387.1| PREDICTED: putative RING-H2 finger protein ATL21A [Vitis vinifera]
gi|297745433|emb|CBI40513.3| unnamed protein product
[Vitis vinifera]
Length = 372
Score = 61.6 bits (148), Expect(2) = 2e-08
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = -2
Query: 283 PDCGHCFHAECVDEWLRVSATCPLCR 206
PDCGHCFHAEC+DEWLRV+ +CP+CR
Sbjct: 337 PDCGHCFHAECIDEWLRVNGSCPVCR 362
Score = 22.7 bits (47), Expect(2) = 2e-08
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -3
Query: 333 CPICLAEYETGE 298
CPICL++Y T E
Sbjct: 320 CPICLSDYCTKE 331
>ref|XP_002992199.1| hypothetical protein SELMODRAFT_186618 [Selaginella moellendorffii]
gi|300139966|gb|EFJ06696.1| hypothetical protein
SELMODRAFT_186618 [Selaginella moellendorffii]
Length = 160
Score = 63.5 bits (153), Expect(2) = 2e-08
Identities = 27/53 (50%), Positives = 32/53 (60%)
Frame = -2
Query: 283 PDCGHCFHAECVDEWLRVSATCPLCRXXXXXXXXXXXXXXPLSELIPLAAHAR 125
PDC H FH +C+D W+R+ ATCP+CR PLSELIPLA H R
Sbjct: 108 PDCRHVFHVQCIDSWMRLQATCPMCRTSPLPTPQATPISTPLSELIPLARHPR 160
Score = 20.8 bits (42), Expect(2) = 2e-08
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -3
Query: 333 CPICLAEYETGE 298
C ICLA+Y E
Sbjct: 91 CAICLADYREAE 102
>gb|ABA95749.1| Kelch motif family protein [Oryza sativa Japonica Group]
Length = 676
Score = 64.3 bits (155), Expect = 2e-08
Identities = 34/60 (56%), Positives = 38/60 (63%)
Frame = -2
Query: 304 RRGTPSSPDCGHCFHAECVDEWLRVSATCPLCRXXXXXXXXXXXXXXPLSELIPLAAHAR 125
RRG P CGH FHAECV+ WLRVSATCP+CR PL+E +PLAAHAR
Sbjct: 625 RRG----PGCGHRFHAECVERWLRVSATCPVCR----DSPLPSPMATPLAEAVPLAAHAR 676