BLASTX nr result
ID: Zingiber23_contig00052904
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00052904
(324 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001048055.1| Os02g0736600 [Oryza sativa Japonica Group] g... 75 1e-11
gb|EEE57768.1| hypothetical protein OsJ_08305 [Oryza sativa Japo... 75 1e-11
gb|EAY87444.1| hypothetical protein OsI_08853 [Oryza sativa Indi... 74 2e-11
ref|XP_006647859.1| PREDICTED: probable ATP-dependent RNA helica... 71 2e-10
ref|XP_004953853.1| PREDICTED: probable ATP-dependent RNA helica... 70 4e-10
gb|AFW73310.1| hypothetical protein ZEAMMB73_220834 [Zea mays] 66 4e-09
ref|XP_003573127.1| PREDICTED: probable ATP-dependent RNA helica... 65 7e-09
ref|XP_002454319.1| hypothetical protein SORBIDRAFT_04g028590 [S... 64 2e-08
ref|XP_004985938.1| PREDICTED: probable ATP-dependent RNA helica... 64 2e-08
gb|EMS49988.1| putative ATP-dependent RNA helicase kurz [Triticu... 64 2e-08
gb|EMT08593.1| Putative ATP-dependent RNA helicase kurz [Aegilop... 62 8e-08
gb|EOX95170.1| RNA helicase family protein, putative [Theobroma ... 57 2e-06
gb|EOY18777.1| RNA helicase family protein [Theobroma cacao] 57 3e-06
>ref|NP_001048055.1| Os02g0736600 [Oryza sativa Japonica Group]
gi|46390441|dbj|BAD15903.1| putative kurz protein [Oryza
sativa Japonica Group] gi|113537586|dbj|BAF09969.1|
Os02g0736600 [Oryza sativa Japonica Group]
gi|215768291|dbj|BAH00520.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 1272
Score = 74.7 bits (182), Expect = 1e-11
Identities = 37/65 (56%), Positives = 46/65 (70%)
Frame = -1
Query: 240 HKISDSAYSLLQSSGTIGRAETFKERRLRAVQLMKVGLEVPEDVFALNRKGNQTDSHKTE 61
HKISD AYSLL +SGTIG+AET KE+R RAV K GL VPE++ L + G+Q S +E
Sbjct: 64 HKISDDAYSLLHASGTIGQAETLKEKRRRAVHFSKAGLNVPEELSLLKKDGDQKASENSE 123
Query: 60 TSLED 46
+ ED
Sbjct: 124 AAEED 128
>gb|EEE57768.1| hypothetical protein OsJ_08305 [Oryza sativa Japonica Group]
Length = 926
Score = 74.7 bits (182), Expect = 1e-11
Identities = 37/65 (56%), Positives = 46/65 (70%)
Frame = -1
Query: 240 HKISDSAYSLLQSSGTIGRAETFKERRLRAVQLMKVGLEVPEDVFALNRKGNQTDSHKTE 61
HKISD AYSLL +SGTIG+AET KE+R RAV K GL VPE++ L + G+Q S +E
Sbjct: 64 HKISDDAYSLLHASGTIGQAETLKEKRRRAVHFSKAGLNVPEELSLLKKDGDQKASENSE 123
Query: 60 TSLED 46
+ ED
Sbjct: 124 AAEED 128
>gb|EAY87444.1| hypothetical protein OsI_08853 [Oryza sativa Indica Group]
Length = 1260
Score = 73.9 bits (180), Expect = 2e-11
Identities = 37/65 (56%), Positives = 46/65 (70%)
Frame = -1
Query: 240 HKISDSAYSLLQSSGTIGRAETFKERRLRAVQLMKVGLEVPEDVFALNRKGNQTDSHKTE 61
HKISD AYSLL +SGTIG+A T KE+R RAVQ K GL VPE++ L + G+Q S +E
Sbjct: 64 HKISDDAYSLLHASGTIGQAGTLKEKRRRAVQFSKAGLNVPEELSLLKKDGDQKASENSE 123
Query: 60 TSLED 46
+ ED
Sbjct: 124 AAEED 128
>ref|XP_006647859.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Oryza
brachyantha]
Length = 1272
Score = 70.9 bits (172), Expect = 2e-10
Identities = 38/75 (50%), Positives = 51/75 (68%)
Frame = -1
Query: 240 HKISDSAYSLLQSSGTIGRAETFKERRLRAVQLMKVGLEVPEDVFALNRKGNQTDSHKTE 61
HKISD AYSLL +SG+IG+AET KERR RAVQ K G +VPE++ + G++ +E
Sbjct: 64 HKISDDAYSLLHASGSIGQAETLKERRRRAVQFSKAGFDVPEELSLFKKDGDKIVPENSE 123
Query: 60 TSLEDGSVQDLLDLA 16
+S E+ S Q +D A
Sbjct: 124 SS-EEISPQKFVDSA 137
>ref|XP_004953853.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Setaria
italica]
Length = 1286
Score = 69.7 bits (169), Expect = 4e-10
Identities = 33/60 (55%), Positives = 44/60 (73%)
Frame = -1
Query: 240 HKISDSAYSLLQSSGTIGRAETFKERRLRAVQLMKVGLEVPEDVFALNRKGNQTDSHKTE 61
HKIS+ AYSLL +SGTIG+ ET KE+R RA+QL K GL+VPE++ R G+Q S ++
Sbjct: 64 HKISEDAYSLLHASGTIGQVETLKEKRRRAMQLSKAGLDVPEELSLFKRNGDQKFSENSD 123
>gb|AFW73310.1| hypothetical protein ZEAMMB73_220834 [Zea mays]
Length = 1287
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = -1
Query: 240 HKISDSAYSLLQSSGTIGRAETFKERRLRAVQLMKVGLEVPEDVFALNRKG 88
HKIS+ AYSLL +SGTIG+AET KE+R RAVQ K GL+VPE++ + G
Sbjct: 73 HKISEDAYSLLHASGTIGQAETLKEKRRRAVQFSKAGLDVPEELSLFKKSG 123
>ref|XP_003573127.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like
[Brachypodium distachyon]
Length = 1273
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Frame = -1
Query: 240 HKISDSAYSLLQSSGTIGRAETFKERRLRAVQLMKVGLEVPEDVFALNRKGNQTDSHKT- 64
H+I+D AY+LLQ+SG+IG+AET KE+R RAVQ K GL+VPE++ + Q + +T
Sbjct: 68 HRIADDAYALLQTSGSIGQAETMKEKRRRAVQFSKAGLDVPEELSLFKKNCRQKEVPETS 127
Query: 63 ETSLE 49
E +LE
Sbjct: 128 EAALE 132
>ref|XP_002454319.1| hypothetical protein SORBIDRAFT_04g028590 [Sorghum bicolor]
gi|241934150|gb|EES07295.1| hypothetical protein
SORBIDRAFT_04g028590 [Sorghum bicolor]
Length = 1284
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/52 (55%), Positives = 40/52 (76%)
Frame = -1
Query: 240 HKISDSAYSLLQSSGTIGRAETFKERRLRAVQLMKVGLEVPEDVFALNRKGN 85
HKIS+ A+SLL +SGTIG+AET KE+R RAVQ K GL++PE++ + G+
Sbjct: 73 HKISEDAHSLLHASGTIGQAETLKEKRRRAVQFSKAGLDIPEELSLFKKNGD 124
>ref|XP_004985938.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Setaria
italica]
Length = 1287
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = -1
Query: 240 HKISDSAYSLLQSSGTIGRAETFKERRLRAVQLMKVGLEVPEDVFALNRKGNQTDSHKTE 61
HKIS+ AYSLL +SGTIG+ ET KE+ RA+QL K GL+VPE++ R +Q S ++
Sbjct: 65 HKISEDAYSLLHASGTIGQVETLKEKCRRAMQLSKAGLDVPEELSLFKRNDDQKFSENSD 124
>gb|EMS49988.1| putative ATP-dependent RNA helicase kurz [Triticum urartu]
Length = 1249
Score = 63.9 bits (154), Expect = 2e-08
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = -1
Query: 240 HKISDSAYSLLQSSGTIGRAETFKERRLRAVQLMKVGLEVPEDVFALNRKGNQT 79
H+I+D AYSLL +SG+IG+A T KE+R RA+QL K GL+VPE++ + +QT
Sbjct: 120 HRIADEAYSLLHTSGSIGQAATMKEKRRRAMQLSKAGLDVPEELSLFKKNSDQT 173
>gb|EMT08593.1| Putative ATP-dependent RNA helicase kurz [Aegilops tauschii]
Length = 1337
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/53 (52%), Positives = 40/53 (75%)
Frame = -1
Query: 240 HKISDSAYSLLQSSGTIGRAETFKERRLRAVQLMKVGLEVPEDVFALNRKGNQ 82
H+I+D AYSLL +SG+IG+A T KE+R RA+QL K GL+VPE++ + +Q
Sbjct: 120 HRIADEAYSLLHTSGSIGQAATMKEKRRRAMQLSKAGLDVPEELSLFKKNSDQ 172
>gb|EOX95170.1| RNA helicase family protein, putative [Theobroma cacao]
Length = 1264
Score = 57.4 bits (137), Expect = 2e-06
Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Frame = -1
Query: 240 HKISDSAYSLLQSSGTIGRAETFKERRLRAVQLMKVGLEVP-EDVFALNRKG-NQTDSHK 67
+KI + AYSLL+SS TIG AET +E+R RAVQ +K GLE+P D + R G N + S +
Sbjct: 86 YKIPEDAYSLLRSSKTIGLAETMREKRRRAVQFLKAGLELPYVDQSSKGRDGDNLSSSSE 145
Query: 66 TETSLED 46
E LE+
Sbjct: 146 PEPELEE 152
>gb|EOY18777.1| RNA helicase family protein [Theobroma cacao]
Length = 1389
Score = 56.6 bits (135), Expect = 3e-06
Identities = 32/57 (56%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = -1
Query: 240 HKISDSAYSLLQSSGTIGRAETFKERRLRAVQLMKVGLEVP-EDVFALNRKGNQTDS 73
+KIS+ AYSLLQSS TIG AET +E+R R VQ K GLE P D + R GN + S
Sbjct: 156 YKISEDAYSLLQSSKTIGLAETMREKRRRVVQFSKAGLEPPYVDKSSKGRGGNNSSS 212