BLASTX nr result
ID: Zingiber23_contig00052890
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00052890
(311 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY10262.1| Pentatricopeptide repeat-containing protein, puta... 112 5e-23
gb|EOY10260.1| Pentatricopeptide repeat-containing protein, puta... 112 5e-23
ref|XP_004231279.1| PREDICTED: pentatricopeptide repeat-containi... 112 5e-23
ref|XP_004505033.1| PREDICTED: pentatricopeptide repeat-containi... 110 2e-22
ref|XP_003637626.1| Pentatricopeptide repeat-containing protein ... 110 2e-22
ref|XP_003637381.1| Pentatricopeptide repeat-containing protein ... 110 2e-22
ref|XP_006344657.1| PREDICTED: pentatricopeptide repeat-containi... 108 7e-22
ref|XP_002325452.2| hypothetical protein POPTR_0019s06000g [Popu... 106 4e-21
gb|EXB68732.1| hypothetical protein L484_024754 [Morus notabilis] 105 5e-21
ref|XP_006484704.1| PREDICTED: pentatricopeptide repeat-containi... 105 8e-21
ref|XP_006437400.1| hypothetical protein CICLE_v10030585mg [Citr... 105 8e-21
ref|XP_006583812.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
ref|XP_006583811.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
ref|XP_002524030.1| pentatricopeptide repeat-containing protein,... 102 4e-20
ref|XP_006827611.1| hypothetical protein AMTR_s00009p00241130 [A... 101 9e-20
ref|XP_004303063.1| PREDICTED: pentatricopeptide repeat-containi... 101 9e-20
gb|EPS64944.1| hypothetical protein M569_09832, partial [Genlise... 101 1e-19
gb|EOY10261.1| Pentatricopeptide repeat-containing protein, puta... 100 2e-19
gb|ESW31301.1| hypothetical protein PHAVU_002G227100g [Phaseolus... 92 5e-17
ref|XP_006399994.1| hypothetical protein EUTSA_v10012597mg [Eutr... 83 4e-14
>gb|EOY10262.1| Pentatricopeptide repeat-containing protein, putative isoform 3
[Theobroma cacao]
Length = 1032
Score = 112 bits (280), Expect = 5e-23
Identities = 54/106 (50%), Positives = 74/106 (69%), Gaps = 3/106 (2%)
Frame = +1
Query: 1 FNSAGFVEEVPFVYADLILAFAKPDAFTHNVLLHALCKMGSLDAALSIIRSAGD---VDV 171
FN++G V EV +Y+++I P+ FT NVL+H+L K+G+L AL ++R+ G+ VD
Sbjct: 106 FNASGLVSEVMLLYSEMIACGVLPNVFTINVLVHSLAKVGNLSFALELLRNVGNNNNVDT 165
Query: 172 VSYNTLIWGFCDLESPEFAVGLLSEMLKKGFPLDSFSCNILAKGFC 309
V+YNTLIWGFC+ GLLSEM+KKG D+FSCNI+ KGFC
Sbjct: 166 VTYNTLIWGFCEQGLAYQGFGLLSEMVKKGINFDTFSCNIVVKGFC 211
>gb|EOY10260.1| Pentatricopeptide repeat-containing protein, putative isoform 1
[Theobroma cacao]
Length = 1025
Score = 112 bits (280), Expect = 5e-23
Identities = 54/106 (50%), Positives = 74/106 (69%), Gaps = 3/106 (2%)
Frame = +1
Query: 1 FNSAGFVEEVPFVYADLILAFAKPDAFTHNVLLHALCKMGSLDAALSIIRSAGD---VDV 171
FN++G V EV +Y+++I P+ FT NVL+H+L K+G+L AL ++R+ G+ VD
Sbjct: 20 FNASGLVSEVMLLYSEMIACGVLPNVFTINVLVHSLAKVGNLSFALELLRNVGNNNNVDT 79
Query: 172 VSYNTLIWGFCDLESPEFAVGLLSEMLKKGFPLDSFSCNILAKGFC 309
V+YNTLIWGFC+ GLLSEM+KKG D+FSCNI+ KGFC
Sbjct: 80 VTYNTLIWGFCEQGLAYQGFGLLSEMVKKGINFDTFSCNIVVKGFC 125
>ref|XP_004231279.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Solanum lycopersicum]
Length = 1035
Score = 112 bits (280), Expect = 5e-23
Identities = 51/103 (49%), Positives = 73/103 (70%)
Frame = +1
Query: 1 FNSAGFVEEVPFVYADLILAFAKPDAFTHNVLLHALCKMGSLDAALSIIRSAGDVDVVSY 180
FNSAG V++V +Y+D++ + T N+++H+LCK+G L+ AL ++R + D V+Y
Sbjct: 101 FNSAGLVDQVIILYSDMLACGVASNVVTRNIVVHSLCKVGKLEKALELLRE-NESDTVTY 159
Query: 181 NTLIWGFCDLESPEFAVGLLSEMLKKGFPLDSFSCNILAKGFC 309
NTLIWGFC +E E GLLS+MLKKG +D+ +CNIL KGFC
Sbjct: 160 NTLIWGFCRIEFVEMGFGLLSDMLKKGVFIDTITCNILIKGFC 202
>ref|XP_004505033.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Cicer arietinum]
Length = 1011
Score = 110 bits (275), Expect = 2e-22
Identities = 51/104 (49%), Positives = 72/104 (69%), Gaps = 1/104 (0%)
Frame = +1
Query: 1 FNSAGFVEEVPFVYADLILAFAKPDAFTHNVLLHALCKMGSLDAALSIIRS-AGDVDVVS 177
FNS+G V +V +Y+D++L PD F+ NVL+H+LC G L+ AL +R+ D+D V+
Sbjct: 87 FNSSGLVSQVKVMYSDMVLCGVVPDVFSVNVLVHSLCNAGDLNLALGYLRNNVVDIDNVT 146
Query: 178 YNTLIWGFCDLESPEFAVGLLSEMLKKGFPLDSFSCNILAKGFC 309
YNT+IWGFC+ + GLLSEM+KKG DS +CN+L KG+C
Sbjct: 147 YNTVIWGFCEKGLVDQGFGLLSEMVKKGLCFDSITCNVLVKGYC 190
>ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503561|gb|AES84764.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 989
Score = 110 bits (275), Expect = 2e-22
Identities = 51/105 (48%), Positives = 72/105 (68%), Gaps = 2/105 (1%)
Frame = +1
Query: 1 FNSAGFVEEVPFVYADLILAFAKPDAFTHNVLLHALCKMGSLDAALSIIRSAG--DVDVV 174
FN++G V +V +Y+D++ PD F+ NVL+H+LCK+G LD AL +R+ D+D V
Sbjct: 104 FNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDNV 163
Query: 175 SYNTLIWGFCDLESPEFAVGLLSEMLKKGFPLDSFSCNILAKGFC 309
+YNT+IWGFC + GLLSEM+K+G DS +CNIL KG+C
Sbjct: 164 TYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYC 208
>ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 110 bits (275), Expect = 2e-22
Identities = 51/105 (48%), Positives = 72/105 (68%), Gaps = 2/105 (1%)
Frame = +1
Query: 1 FNSAGFVEEVPFVYADLILAFAKPDAFTHNVLLHALCKMGSLDAALSIIRSAG--DVDVV 174
FN++G V +V +Y+D++ PD F+ NVL+H+LCK+G LD AL +R+ D+D V
Sbjct: 104 FNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDNV 163
Query: 175 SYNTLIWGFCDLESPEFAVGLLSEMLKKGFPLDSFSCNILAKGFC 309
+YNT+IWGFC + GLLSEM+K+G DS +CNIL KG+C
Sbjct: 164 TYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYC 208
>ref|XP_006344657.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like isoform X1 [Solanum tuberosum]
Length = 1035
Score = 108 bits (270), Expect = 7e-22
Identities = 49/103 (47%), Positives = 72/103 (69%)
Frame = +1
Query: 1 FNSAGFVEEVPFVYADLILAFAKPDAFTHNVLLHALCKMGSLDAALSIIRSAGDVDVVSY 180
FNSAG V++V +Y+D++ + T N+++H+LCK+G L+ AL ++R + D V+Y
Sbjct: 101 FNSAGLVDQVIVLYSDMLACGVASNVVTRNIVVHSLCKVGKLEKALELLRE-NESDTVTY 159
Query: 181 NTLIWGFCDLESPEFAVGLLSEMLKKGFPLDSFSCNILAKGFC 309
NTLIWGFC + E GL+S+MLKKG +D+ +CNIL KGFC
Sbjct: 160 NTLIWGFCRIGFVEMGFGLVSDMLKKGIFIDTITCNILIKGFC 202
>ref|XP_002325452.2| hypothetical protein POPTR_0019s06000g [Populus trichocarpa]
gi|550316902|gb|EEE99833.2| hypothetical protein
POPTR_0019s06000g [Populus trichocarpa]
Length = 941
Score = 106 bits (264), Expect = 4e-21
Identities = 52/104 (50%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Frame = +1
Query: 1 FNSAGFVEEVPFVYADLILAFAKPDAFTHNVLLHALCKMGSLDAALSIIRSAG-DVDVVS 177
FN+ G V +V +Y++++ P+ FTHN+L+HA CKMG L AL +IR+ DVD V+
Sbjct: 98 FNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALDLIRNVDIDVDTVT 157
Query: 178 YNTLIWGFCDLESPEFAVGLLSEMLKKGFPLDSFSCNILAKGFC 309
YNT IWGFC G LS M+KK DSF+CNIL KGFC
Sbjct: 158 YNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFC 201
>gb|EXB68732.1| hypothetical protein L484_024754 [Morus notabilis]
Length = 1019
Score = 105 bits (263), Expect = 5e-21
Identities = 46/103 (44%), Positives = 72/103 (69%)
Frame = +1
Query: 1 FNSAGFVEEVPFVYADLILAFAKPDAFTHNVLLHALCKMGSLDAALSIIRSAGDVDVVSY 180
FN++G V +V +Y++++ P+ FT NVL+H+LCK+G L AL ++R+ +VD V+Y
Sbjct: 96 FNASGLVSQVRLLYSEMLSCGVVPNLFTRNVLVHSLCKLGDLVMALDLLRNH-EVDTVTY 154
Query: 181 NTLIWGFCDLESPEFAVGLLSEMLKKGFPLDSFSCNILAKGFC 309
NT++WGFC A G+LSEM+K+ P+DS++CN + GFC
Sbjct: 155 NTVVWGFCKQGLAHQAFGILSEMVKRDVPIDSYTCNTIVNGFC 197
>ref|XP_006484704.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Citrus sinensis]
Length = 1039
Score = 105 bits (261), Expect = 8e-21
Identities = 52/104 (50%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Frame = +1
Query: 1 FNSAGFVEEVPFVYADLILAFAKPDAFTHNVLLHALCKMGSLDAALSIIRSAG-DVDVVS 177
FN++G V +V VY +I P+ FT NVL+H+ CK+G+L AL +R+ DVD V+
Sbjct: 113 FNASGLVSQVWIVYTHMISCGVLPNVFTINVLVHSFCKVGNLSFALDFLRNVEIDVDNVT 172
Query: 178 YNTLIWGFCDLESPEFAVGLLSEMLKKGFPLDSFSCNILAKGFC 309
YNT+IWGFC+ GLLS M+K G +DSFSCN L KGFC
Sbjct: 173 YNTVIWGFCEQGLANQGFGLLSIMVKNGISVDSFSCNTLVKGFC 216
>ref|XP_006437400.1| hypothetical protein CICLE_v10030585mg [Citrus clementina]
gi|557539596|gb|ESR50640.1| hypothetical protein
CICLE_v10030585mg [Citrus clementina]
Length = 1039
Score = 105 bits (261), Expect = 8e-21
Identities = 52/104 (50%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Frame = +1
Query: 1 FNSAGFVEEVPFVYADLILAFAKPDAFTHNVLLHALCKMGSLDAALSIIRSAG-DVDVVS 177
FN++G V +V VY +I P+ FT NVL+H+ CK+G+L AL +R+ DVD V+
Sbjct: 113 FNASGLVSQVWIVYTHMISCGVLPNVFTINVLVHSFCKVGNLSFALDFLRNVEIDVDNVT 172
Query: 178 YNTLIWGFCDLESPEFAVGLLSEMLKKGFPLDSFSCNILAKGFC 309
YNT+IWGFC+ GLLS M+K G +DSFSCN L KGFC
Sbjct: 173 YNTVIWGFCEQGLANQGFGLLSIMVKNGISVDSFSCNTLVKGFC 216
>ref|XP_006583812.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like isoform X2 [Glycine max]
Length = 867
Score = 103 bits (258), Expect = 2e-20
Identities = 48/103 (46%), Positives = 72/103 (69%)
Frame = +1
Query: 1 FNSAGFVEEVPFVYADLILAFAKPDAFTHNVLLHALCKMGSLDAALSIIRSAGDVDVVSY 180
FN++GFV +V +Y++++L P+ F+ N+L+H+LCK+G L AL +R++ D V+Y
Sbjct: 113 FNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLALGYLRNSV-FDHVTY 171
Query: 181 NTLIWGFCDLESPEFAVGLLSEMLKKGFPLDSFSCNILAKGFC 309
NT++WGFC + GLLSEM+KKG DS +CNIL KG+C
Sbjct: 172 NTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYC 214
>ref|XP_006583811.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like isoform X1 [Glycine max]
Length = 1037
Score = 103 bits (258), Expect = 2e-20
Identities = 48/103 (46%), Positives = 72/103 (69%)
Frame = +1
Query: 1 FNSAGFVEEVPFVYADLILAFAKPDAFTHNVLLHALCKMGSLDAALSIIRSAGDVDVVSY 180
FN++GFV +V +Y++++L P+ F+ N+L+H+LCK+G L AL +R++ D V+Y
Sbjct: 113 FNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLALGYLRNSV-FDHVTY 171
Query: 181 NTLIWGFCDLESPEFAVGLLSEMLKKGFPLDSFSCNILAKGFC 309
NT++WGFC + GLLSEM+KKG DS +CNIL KG+C
Sbjct: 172 NTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYC 214
>ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536757|gb|EEF38398.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1016
Score = 102 bits (255), Expect = 4e-20
Identities = 49/104 (47%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
Frame = +1
Query: 1 FNSAGFVEEVPFVYADLILAFAKPDAFTHNVLLHALCKMGSLDAALSIIRSAG-DVDVVS 177
FN+ G V +V +Y +++ + P+ +THNVL+HA CKMG+L AL ++R+ +VD V+
Sbjct: 20 FNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNLILALDLLRNVDVEVDTVT 79
Query: 178 YNTLIWGFCDLESPEFAVGLLSEMLKKGFPLDSFSCNILAKGFC 309
YNT+IWGFC A G LS M+KK D+ +CNIL KGFC
Sbjct: 80 YNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFC 123
>ref|XP_006827611.1| hypothetical protein AMTR_s00009p00241130 [Amborella trichopoda]
gi|548832231|gb|ERM95027.1| hypothetical protein
AMTR_s00009p00241130 [Amborella trichopoda]
Length = 940
Score = 101 bits (252), Expect = 9e-20
Identities = 48/97 (49%), Positives = 68/97 (70%)
Frame = +1
Query: 19 VEEVPFVYADLILAFAKPDAFTHNVLLHALCKMGSLDAALSIIRSAGDVDVVSYNTLIWG 198
+++V VY++++ P +T+N++LHA CK+G L +AL ++RS D VSYNT+IWG
Sbjct: 2 IDQVWIVYSEMLNYGNSPSIYTYNIVLHAYCKLGRLKSALDLLRSISP-DTVSYNTVIWG 60
Query: 199 FCDLESPEFAVGLLSEMLKKGFPLDSFSCNILAKGFC 309
FC + E A+GLLSEM+KKG +D S NIL KGFC
Sbjct: 61 FCKEGNVELALGLLSEMVKKGVQIDVISSNILVKGFC 97
>ref|XP_004303063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 944
Score = 101 bits (252), Expect = 9e-20
Identities = 43/103 (41%), Positives = 69/103 (66%)
Frame = +1
Query: 1 FNSAGFVEEVPFVYADLILAFAKPDAFTHNVLLHALCKMGSLDAALSIIRSAGDVDVVSY 180
FN +G +V +Y++++ P+ FT N+++H+LCK+G+L AL ++R+ +D VSY
Sbjct: 20 FNVSGLASQVSLLYSEMLSCGVVPNVFTRNIMIHSLCKVGNLSLALHLLRN-NQIDTVSY 78
Query: 181 NTLIWGFCDLESPEFAVGLLSEMLKKGFPLDSFSCNILAKGFC 309
NTLIWGF P A G LS+M+++ +DS++CN+L GFC
Sbjct: 79 NTLIWGFSQQGCPHQAFGFLSQMVQRAIYIDSYTCNLLVNGFC 121
>gb|EPS64944.1| hypothetical protein M569_09832, partial [Genlisea aurea]
Length = 574
Score = 101 bits (251), Expect = 1e-19
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 7/110 (6%)
Frame = +1
Query: 1 FNSAGFVEEVPFVYADLILAFAKPDAFTHNVLLHALCKMGSLDAALSIIRS------AGD 162
FNSAG V +V +Y D+ L+ KP+ T N+++H+LCK+G D AL ++R+ +
Sbjct: 13 FNSAGMVNQVMLLYHDMNLSGVKPNVITKNIVVHSLCKLGDFDCALELLRNNYQERHGFE 72
Query: 163 VDVVSYNTLIWG-FCDLESPEFAVGLLSEMLKKGFPLDSFSCNILAKGFC 309
DVV+YNTLIWG FC + + L+SEMLK+G D F+ NIL KGFC
Sbjct: 73 SDVVTYNTLIWGFFCKHGYVDLGLSLVSEMLKRGISCDDFTRNILIKGFC 122
>gb|EOY10261.1| Pentatricopeptide repeat-containing protein, putative isoform 2
[Theobroma cacao]
Length = 917
Score = 100 bits (249), Expect = 2e-19
Identities = 48/94 (51%), Positives = 66/94 (70%), Gaps = 3/94 (3%)
Frame = +1
Query: 37 VYADLILAFAKPDAFTHNVLLHALCKMGSLDAALSIIRSAGD---VDVVSYNTLIWGFCD 207
+Y+++I P+ FT NVL+H+L K+G+L AL ++R+ G+ VD V+YNTLIWGFC+
Sbjct: 3 LYSEMIACGVLPNVFTINVLVHSLAKVGNLSFALELLRNVGNNNNVDTVTYNTLIWGFCE 62
Query: 208 LESPEFAVGLLSEMLKKGFPLDSFSCNILAKGFC 309
GLLSEM+KKG D+FSCNI+ KGFC
Sbjct: 63 QGLAYQGFGLLSEMVKKGINFDTFSCNIVVKGFC 96
>gb|ESW31301.1| hypothetical protein PHAVU_002G227100g [Phaseolus vulgaris]
Length = 976
Score = 92.4 bits (228), Expect = 5e-17
Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Frame = +1
Query: 1 FNSAGFVEEVPFVYADLILAFAKPDAFTHNVLLHALCKMGSLDAALSIIRSAGDVDVVSY 180
FN+ G V +V +Y++++ P+ F+ NVL+H+LCK G L A+ +R+ D V+Y
Sbjct: 104 FNACGLVSQVRVLYSEMVFCGVGPNVFSVNVLVHSLCKAGDLGLAIGYLRNNSVFDQVTY 163
Query: 181 NTLIWGFCDLESPEFAVGLLSEMLKK-GFPLDSFSCNILAKGFC 309
NT++WGFC + GLLSEM+KK G PLD N L G+C
Sbjct: 164 NTVLWGFCKHGLADQGFGLLSEMVKKGGVPLDVIGLNTLVDGYC 207
>ref|XP_006399994.1| hypothetical protein EUTSA_v10012597mg [Eutrema salsugineum]
gi|557101084|gb|ESQ41447.1| hypothetical protein
EUTSA_v10012597mg [Eutrema salsugineum]
Length = 938
Score = 82.8 bits (203), Expect = 4e-14
Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Frame = +1
Query: 25 EVPFVYADLILAFAKPDAFTHNVLLHALCKMGSLDAALSIIRSAG-DVDVVSYNTLIWGF 201
+V +Y+ +I PD F NVL+H+LC++G L ++S++R+ VD V+YNT+IWG
Sbjct: 112 QVSLIYSKMIACGVAPDVFALNVLIHSLCRVGQLRFSVSLLRNRVISVDTVTYNTVIWGL 171
Query: 202 CDLESPEFAVGLLSEMLKKGFPLDSFSCNILAKGFC 309
C+ + A LSEM+KKG D+ S N L GFC
Sbjct: 172 CEHGLADEAYRFLSEMVKKGILPDTVSYNTLINGFC 207