BLASTX nr result
ID: Zingiber23_contig00052881
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00052881
(215 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004957408.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-l... 108 6e-22
dbj|BAJ88799.1| predicted protein [Hordeum vulgare subsp. vulgare] 108 7e-22
ref|NP_001131757.1| LOC100193125 [Zea mays] gi|194692446|gb|ACF8... 105 5e-21
ref|XP_003578472.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-l... 105 8e-21
ref|XP_002462697.1| hypothetical protein SORBIDRAFT_02g030410 [S... 104 1e-20
ref|XP_006660863.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-l... 103 2e-20
ref|NP_001063719.1| Os09g0525400 [Oryza sativa Japonica Group] g... 103 2e-20
gb|EMS50286.1| E3 ubiquitin ligase BIG BROTHER [Triticum urartu] 93 3e-17
ref|NP_001148879.1| protein binding protein [Zea mays] gi|195622... 90 3e-16
ref|XP_004964385.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-l... 90 4e-16
gb|AFW75321.1| putative RING zinc finger domain superfamily prot... 89 8e-16
gb|ACG47159.1| protein binding protein [Zea mays] 89 8e-16
gb|ACN25846.1| unknown [Zea mays] gi|413953444|gb|AFW86093.1| pu... 87 2e-15
gb|ACG39701.1| protein binding protein [Zea mays] 87 2e-15
gb|ACG24763.1| protein binding protein [Zea mays] 87 2e-15
gb|ABG73441.1| zinc finger C3HC4 type family protein [Oryza brac... 87 2e-15
ref|XP_003564334.1| PREDICTED: uncharacterized protein LOC100841... 87 3e-15
ref|NP_001056653.1| Os06g0125800 [Oryza sativa Japonica Group] g... 86 5e-15
ref|XP_002285497.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER i... 83 4e-14
ref|XP_006655731.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-l... 82 6e-14
>ref|XP_004957408.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Setaria italica]
Length = 175
Score = 108 bits (271), Expect = 6e-22
Identities = 51/75 (68%), Positives = 57/75 (76%), Gaps = 4/75 (5%)
Frame = +2
Query: 2 RGLSDEFISYLKEHRHG---FFSKKGNEECVICKSNYKSR-KLITLPCKHCYHSHCIKRW 169
RGLSDE ISYL+ RH F K NEECVICK+ YKSR K+I LPC HCYH++CI RW
Sbjct: 100 RGLSDELISYLEPFRHKCTLFSRNKNNEECVICKTTYKSRQKMIRLPCSHCYHANCITRW 159
Query: 170 LKENKACPICKEEVF 214
LK NKACP+C EEVF
Sbjct: 160 LKINKACPVCNEEVF 174
>dbj|BAJ88799.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 171
Score = 108 bits (270), Expect = 7e-22
Identities = 52/75 (69%), Positives = 58/75 (77%), Gaps = 4/75 (5%)
Frame = +2
Query: 2 RGLSDEFISYLKEHRHG---FFSKKGNEECVICKSNYKSR-KLITLPCKHCYHSHCIKRW 169
RGLSD+ ISYL+ R+ F SKK +ECVICKSNYKSR KLI LPC HCYH+ CI RW
Sbjct: 96 RGLSDDLISYLEPFRNKCNFFSSKKNTDECVICKSNYKSREKLIRLPCSHCYHAGCITRW 155
Query: 170 LKENKACPICKEEVF 214
LK NKACP+C EEVF
Sbjct: 156 LKINKACPVCNEEVF 170
>ref|NP_001131757.1| LOC100193125 [Zea mays] gi|194692446|gb|ACF80307.1| unknown [Zea
mays] gi|195620790|gb|ACG32225.1| protein binding
protein [Zea mays] gi|195623314|gb|ACG33487.1| protein
binding protein [Zea mays] gi|414886359|tpg|DAA62373.1|
TPA: putative RING zinc finger domain superfamily
protein isoform 1 [Zea mays]
gi|414886360|tpg|DAA62374.1| TPA: putative RING zinc
finger domain superfamily protein isoform 2 [Zea mays]
gi|414886361|tpg|DAA62375.1| TPA: putative RING zinc
finger domain superfamily protein isoform 3 [Zea mays]
Length = 175
Score = 105 bits (263), Expect = 5e-21
Identities = 52/75 (69%), Positives = 59/75 (78%), Gaps = 4/75 (5%)
Frame = +2
Query: 2 RGLSDEFISYLKEHRHG--FFSKKGN-EECVICKSNYKSR-KLITLPCKHCYHSHCIKRW 169
RGLSDE ISYL+ R+ FFS+K N EECVICK+ Y+SR KLI LPC HCYH+ CI RW
Sbjct: 100 RGLSDELISYLEPFRNKCTFFSRKKNSEECVICKTTYRSRQKLIRLPCSHCYHADCITRW 159
Query: 170 LKENKACPICKEEVF 214
LK NKACP+C EEVF
Sbjct: 160 LKINKACPVCNEEVF 174
>ref|XP_003578472.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Brachypodium
distachyon]
Length = 174
Score = 105 bits (261), Expect = 8e-21
Identities = 51/75 (68%), Positives = 56/75 (74%), Gaps = 4/75 (5%)
Frame = +2
Query: 2 RGLSDEFISYLKEHRHG---FFSKKGNEECVICKSNYKSR-KLITLPCKHCYHSHCIKRW 169
RGLSD+ I YL R+ F SKK +EECVICKS YKSR KLI LPC HCYH+ CI RW
Sbjct: 99 RGLSDDLICYLVPFRNKCNFFSSKKNHEECVICKSTYKSRQKLIRLPCSHCYHADCITRW 158
Query: 170 LKENKACPICKEEVF 214
LK NKACP+C EEVF
Sbjct: 159 LKINKACPVCNEEVF 173
>ref|XP_002462697.1| hypothetical protein SORBIDRAFT_02g030410 [Sorghum bicolor]
gi|241926074|gb|EER99218.1| hypothetical protein
SORBIDRAFT_02g030410 [Sorghum bicolor]
Length = 175
Score = 104 bits (259), Expect = 1e-20
Identities = 51/75 (68%), Positives = 59/75 (78%), Gaps = 4/75 (5%)
Frame = +2
Query: 2 RGLSDEFISYLKEHRHG--FFSKKGN-EECVICKSNYKSR-KLITLPCKHCYHSHCIKRW 169
RGLSDE I+YL+ R+ FFS+K N EECVICK+ YKSR ++I LPC HCYH+ CI RW
Sbjct: 100 RGLSDELIAYLEPFRNKCTFFSRKKNSEECVICKTTYKSRQRMIRLPCSHCYHADCITRW 159
Query: 170 LKENKACPICKEEVF 214
LK NKACPIC EEVF
Sbjct: 160 LKINKACPICNEEVF 174
>ref|XP_006660863.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Oryza brachyantha]
Length = 174
Score = 103 bits (257), Expect = 2e-20
Identities = 51/75 (68%), Positives = 57/75 (76%), Gaps = 4/75 (5%)
Frame = +2
Query: 2 RGLSDEFISYLKEHRH--GFFSKKGN-EECVICKSNYKSR-KLITLPCKHCYHSHCIKRW 169
RGL D+ ISYL ++ FFS+K N EECVICKS YKSR KLI LPC HCYH+ CI RW
Sbjct: 99 RGLPDDLISYLVPFKNKCSFFSRKKNDEECVICKSTYKSRQKLIRLPCSHCYHADCITRW 158
Query: 170 LKENKACPICKEEVF 214
LK NKACP+C EEVF
Sbjct: 159 LKINKACPVCNEEVF 173
>ref|NP_001063719.1| Os09g0525400 [Oryza sativa Japonica Group]
gi|52076039|dbj|BAD46492.1| unknown protein [Oryza
sativa Japonica Group] gi|52077307|dbj|BAD46348.1|
unknown protein [Oryza sativa Japonica Group]
gi|113631952|dbj|BAF25633.1| Os09g0525400 [Oryza sativa
Japonica Group] gi|215678995|dbj|BAG96425.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215694690|dbj|BAG89881.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218202480|gb|EEC84907.1| hypothetical protein
OsI_32099 [Oryza sativa Indica Group]
gi|222641942|gb|EEE70074.1| hypothetical protein
OsJ_30060 [Oryza sativa Japonica Group]
Length = 174
Score = 103 bits (257), Expect = 2e-20
Identities = 51/75 (68%), Positives = 57/75 (76%), Gaps = 4/75 (5%)
Frame = +2
Query: 2 RGLSDEFISYLKEHRH--GFFSKKGN-EECVICKSNYKSR-KLITLPCKHCYHSHCIKRW 169
RGLSD+ I YL ++ FFS+K N EECVICKS YKSR KLI LPC HCYH+ CI RW
Sbjct: 99 RGLSDDLICYLVPFKNKCSFFSRKKNDEECVICKSTYKSRQKLIRLPCSHCYHADCITRW 158
Query: 170 LKENKACPICKEEVF 214
LK NKACP+C EEVF
Sbjct: 159 LKINKACPVCNEEVF 173
>gb|EMS50286.1| E3 ubiquitin ligase BIG BROTHER [Triticum urartu]
Length = 199
Score = 93.2 bits (230), Expect = 3e-17
Identities = 51/103 (49%), Positives = 59/103 (57%), Gaps = 32/103 (31%)
Frame = +2
Query: 2 RGLSDEFISYLKEHRH--GFFSKKGNEE-----------------------------CVI 88
RGLSD+ ISYL+ R+ FFS K N + CVI
Sbjct: 96 RGLSDDLISYLEPFRNKCNFFSCKKNTDEYVTVSFTLNRSSFCNPMMNNNRVIPPCRCVI 155
Query: 89 CKSNYKS-RKLITLPCKHCYHSHCIKRWLKENKACPICKEEVF 214
CKSNYKS +KLI LPC HCYH++CI RWLK NKACP+C EEVF
Sbjct: 156 CKSNYKSLQKLIRLPCSHCYHANCITRWLKINKACPVCNEEVF 198
>ref|NP_001148879.1| protein binding protein [Zea mays] gi|195622886|gb|ACG33273.1|
protein binding protein [Zea mays]
Length = 268
Score = 90.1 bits (222), Expect = 3e-16
Identities = 42/76 (55%), Positives = 57/76 (75%), Gaps = 5/76 (6%)
Frame = +2
Query: 2 RGLSDEFISYLKEHRH---GFFSKKGN-EECVICKSNYKSRK-LITLPCKHCYHSHCIKR 166
RGLSDE ISYL+ ++ G FS+K N E+C IC S +++R+ +ITLPC+H YH+ C+ R
Sbjct: 190 RGLSDELISYLQSWKYKSSGLFSRKTNHEDCPICLSTFRNRETMITLPCRHHYHAACVTR 249
Query: 167 WLKENKACPICKEEVF 214
WLK NK CP+CK E+F
Sbjct: 250 WLKVNKTCPVCKYELF 265
>ref|XP_004964385.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Setaria italica]
Length = 256
Score = 89.7 bits (221), Expect = 4e-16
Identities = 42/76 (55%), Positives = 56/76 (73%), Gaps = 5/76 (6%)
Frame = +2
Query: 2 RGLSDEFISYLKEHRH---GFFSKKGN-EECVICKSNYKSRK-LITLPCKHCYHSHCIKR 166
RGLSDE ISYL++ ++ GFF +K N E+C IC S ++ R+ +ITLPCKH YH+ C+ +
Sbjct: 178 RGLSDELISYLQKWKYKASGFFYRKTNHEDCTICLSTFRHRESMITLPCKHYYHAACVAK 237
Query: 167 WLKENKACPICKEEVF 214
WLK NK CP+CK E F
Sbjct: 238 WLKVNKTCPVCKYEPF 253
>gb|AFW75321.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 318
Score = 88.6 bits (218), Expect = 8e-16
Identities = 42/79 (53%), Positives = 57/79 (72%), Gaps = 8/79 (10%)
Frame = +2
Query: 2 RGLSDEFISYLKEHRH------GFFSKKGN-EECVICKSNYKSRK-LITLPCKHCYHSHC 157
RGLSDE ISYL+ ++ G FS+K N E+C IC S +++R+ +ITLPC+H YH+ C
Sbjct: 237 RGLSDELISYLQPWKYKAVKASGLFSRKTNHEDCPICLSTFRNRETMITLPCRHHYHAAC 296
Query: 158 IKRWLKENKACPICKEEVF 214
+ RWLK NK CP+CK E+F
Sbjct: 297 VTRWLKVNKTCPVCKYELF 315
>gb|ACG47159.1| protein binding protein [Zea mays]
Length = 271
Score = 88.6 bits (218), Expect = 8e-16
Identities = 42/79 (53%), Positives = 57/79 (72%), Gaps = 8/79 (10%)
Frame = +2
Query: 2 RGLSDEFISYLKEHRH------GFFSKKGN-EECVICKSNYKSRK-LITLPCKHCYHSHC 157
RGLSDE ISYL+ ++ G FS+K N E+C IC S +++R+ +ITLPC+H YH+ C
Sbjct: 190 RGLSDELISYLQPWKYKAVKASGLFSRKTNHEDCPICLSTFRNRETMITLPCRHHYHAAC 249
Query: 158 IKRWLKENKACPICKEEVF 214
+ RWLK NK CP+CK E+F
Sbjct: 250 VTRWLKVNKTCPVCKYELF 268
>gb|ACN25846.1| unknown [Zea mays] gi|413953444|gb|AFW86093.1| putative RING zinc
finger domain superfamily protein [Zea mays]
Length = 268
Score = 87.4 bits (215), Expect = 2e-15
Identities = 40/76 (52%), Positives = 57/76 (75%), Gaps = 5/76 (6%)
Frame = +2
Query: 2 RGLSDEFISYLKEHRH---GFFSKKGN-EECVICKSNYKSRK-LITLPCKHCYHSHCIKR 166
RGLSDE ISYL+ ++ GFFS+K N ++C IC S +++R+ +ITLPC H YH+ C+ +
Sbjct: 190 RGLSDELISYLQPWKYKASGFFSRKTNHDDCPICLSTFRNRETMITLPCMHHYHAACVTK 249
Query: 167 WLKENKACPICKEEVF 214
WL+ NK CP+CK E+F
Sbjct: 250 WLRVNKTCPVCKYELF 265
>gb|ACG39701.1| protein binding protein [Zea mays]
Length = 268
Score = 87.4 bits (215), Expect = 2e-15
Identities = 40/76 (52%), Positives = 57/76 (75%), Gaps = 5/76 (6%)
Frame = +2
Query: 2 RGLSDEFISYLKEHRH---GFFSKKGN-EECVICKSNYKSRK-LITLPCKHCYHSHCIKR 166
RGLSDE ISYL+ ++ GFFS+K N ++C IC S +++R+ +ITLPC H YH+ C+ +
Sbjct: 190 RGLSDELISYLQPWKYKASGFFSRKTNHDDCPICLSTFRNRETMITLPCMHHYHAACVTK 249
Query: 167 WLKENKACPICKEEVF 214
WL+ NK CP+CK E+F
Sbjct: 250 WLRVNKTCPVCKYELF 265
>gb|ACG24763.1| protein binding protein [Zea mays]
Length = 268
Score = 87.4 bits (215), Expect = 2e-15
Identities = 40/76 (52%), Positives = 57/76 (75%), Gaps = 5/76 (6%)
Frame = +2
Query: 2 RGLSDEFISYLKEHRH---GFFSKKGN-EECVICKSNYKSRK-LITLPCKHCYHSHCIKR 166
RGLSDE ISYL+ ++ GFFS+K N ++C IC S +++R+ +ITLPC H YH+ C+ +
Sbjct: 190 RGLSDELISYLQPWKYKASGFFSRKTNHDDCPICLSTFRNRETMITLPCMHHYHAACVTK 249
Query: 167 WLKENKACPICKEEVF 214
WL+ NK CP+CK E+F
Sbjct: 250 WLRVNKTCPVCKYELF 265
>gb|ABG73441.1| zinc finger C3HC4 type family protein [Oryza brachyantha]
Length = 227
Score = 87.0 bits (214), Expect = 2e-15
Identities = 44/67 (65%), Positives = 49/67 (73%), Gaps = 4/67 (5%)
Frame = +2
Query: 2 RGLSDEFISYLKEHRH--GFFSKKGN-EECVICKSNYKSR-KLITLPCKHCYHSHCIKRW 169
RGL D+ ISYL ++ FFS+K N EECVICKS YKSR KLI LPC HCYH+ CI RW
Sbjct: 99 RGLPDDLISYLVPFKNKCSFFSRKKNDEECVICKSTYKSRQKLIRLPCSHCYHADCITRW 158
Query: 170 LKENKAC 190
LK NK C
Sbjct: 159 LKINKVC 165
>ref|XP_003564334.1| PREDICTED: uncharacterized protein LOC100841715 [Brachypodium
distachyon]
Length = 248
Score = 86.7 bits (213), Expect = 3e-15
Identities = 42/78 (53%), Positives = 57/78 (73%), Gaps = 7/78 (8%)
Frame = +2
Query: 2 RGLSDEFISYLK----EHRHGFFSKKGN--EECVICKSNYKSR-KLITLPCKHCYHSHCI 160
RGLSDE +S+L + R GFFS+K N ++C IC S +++R +LITLPCKH YH+ C+
Sbjct: 168 RGLSDELMSFLVPWKYKDRSGFFSRKTNNLDDCSICLSAFRNRERLITLPCKHNYHAGCV 227
Query: 161 KRWLKENKACPICKEEVF 214
+WLK +K CP+CK EVF
Sbjct: 228 TKWLKIDKTCPVCKYEVF 245
>ref|NP_001056653.1| Os06g0125800 [Oryza sativa Japonica Group]
gi|6983871|dbj|BAA90806.1| zinc finger protein-like
[Oryza sativa Japonica Group] gi|29164825|gb|AAO65505.1|
zinc-finger protein [Oryza sativa Indica Group]
gi|29170198|gb|AAO65973.1| zinc finger protein [Oryza
sativa Indica Group] gi|113594693|dbj|BAF18567.1|
Os06g0125800 [Oryza sativa Japonica Group]
gi|125553874|gb|EAY99479.1| hypothetical protein
OsI_21447 [Oryza sativa Indica Group]
gi|125595889|gb|EAZ35669.1| hypothetical protein
OsJ_19955 [Oryza sativa Japonica Group]
gi|215686984|dbj|BAG90854.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737541|dbj|BAG96671.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|324029071|gb|ADY16682.1| E3 ligase [Oryza sativa
Japonica Group] gi|324029073|gb|ADY16683.1| E3 ligase
[Oryza sativa Japonica Group]
Length = 261
Score = 85.9 bits (211), Expect = 5e-15
Identities = 43/75 (57%), Positives = 54/75 (72%), Gaps = 4/75 (5%)
Frame = +2
Query: 2 RGLSDEFISYLK--EHRHGFFSKKGNEE-CVICKSNYKSRK-LITLPCKHCYHSHCIKRW 169
RGLSD ISYL+ +++ GFF +K N + C IC S ++ R+ LITL CKH YH CI RW
Sbjct: 184 RGLSDLLISYLETWKYKSGFFPRKANHDNCPICLSAFRRRETLITLACKHSYHEGCIARW 243
Query: 170 LKENKACPICKEEVF 214
LK +KACP+CK EVF
Sbjct: 244 LKIDKACPVCKYEVF 258
>ref|XP_002285497.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform 1 [Vitis
vinifera] gi|225435476|ref|XP_002285498.1| PREDICTED: E3
ubiquitin ligase BIG BROTHER isoform 2 [Vitis vinifera]
gi|297746341|emb|CBI16397.3| unnamed protein product
[Vitis vinifera]
Length = 252
Score = 82.8 bits (203), Expect = 4e-14
Identities = 43/75 (57%), Positives = 52/75 (69%), Gaps = 5/75 (6%)
Frame = +2
Query: 2 RGLSDEFISYL--KEHRHGFFSKKGN--EECVICKSNYKSR-KLITLPCKHCYHSHCIKR 166
RGLS E IS L +++ GFF++K + E CVIC+ YK R +LITLPCKH YH+ C R
Sbjct: 169 RGLSQELISLLPISKYKCGFFTRKKSRCERCVICQMEYKRRDRLITLPCKHVYHAACGTR 228
Query: 167 WLKENKACPICKEEV 211
WL NKACPIC EV
Sbjct: 229 WLSINKACPICYTEV 243
>ref|XP_006655731.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Oryza brachyantha]
Length = 244
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 4/75 (5%)
Frame = +2
Query: 2 RGLSDEFISYLK--EHRHGFFSKKGN-EECVICKSNYKSRK-LITLPCKHCYHSHCIKRW 169
RGLSD ISYL+ +++ GFF +K N ++C IC S ++ R+ +ITL CKH YH C+ RW
Sbjct: 167 RGLSDLLISYLETWKYKSGFFPRKANHDDCPICLSAFRRRETVITLACKHTYHEACVARW 226
Query: 170 LKENKACPICKEEVF 214
LK ++ CP+CK EVF
Sbjct: 227 LKIDRTCPVCKYEVF 241