BLASTX nr result
ID: Zingiber23_contig00052848
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00052848
(280 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY19271.1| Retrotransposon protein, putative [Theobroma cacao] 100 2e-19
ref|XP_006436321.1| hypothetical protein CICLE_v10033628mg, part... 96 6e-18
ref|XP_006421106.1| hypothetical protein CICLE_v10006890mg, part... 95 1e-17
gb|EOY04065.1| Retrotransposon protein, putative [Theobroma cacao] 94 2e-17
ref|XP_006432547.1| hypothetical protein CICLE_v10003434mg, part... 93 3e-17
ref|XP_006447393.1| hypothetical protein CICLE_v10017516mg, part... 86 7e-15
ref|XP_006376079.1| hypothetical protein POPTR_0013s08940g [Popu... 84 1e-14
ref|XP_006339985.1| PREDICTED: uncharacterized protein LOC102579... 83 4e-14
ref|XP_006386829.1| hypothetical protein POPTR_0002s22700g [Popu... 82 7e-14
gb|ABI34377.1| Polyprotein, putative [Solanum demissum] 81 1e-13
ref|XP_006366682.1| PREDICTED: uncharacterized protein LOC102594... 80 4e-13
ref|XP_006384319.1| hypothetical protein POPTR_0004s12480g, part... 76 5e-12
ref|XP_006381479.1| hypothetical protein POPTR_0006s13220g, part... 75 7e-12
gb|AAK52165.1|AC084831_19 putative polyprotein [Oryza sativa Jap... 75 1e-11
ref|XP_004235103.1| PREDICTED: uncharacterized protein LOC101251... 73 4e-11
ref|XP_006374180.1| hypothetical protein POPTR_0015s03800g [Popu... 72 6e-11
ref|XP_004241082.1| PREDICTED: uncharacterized protein LOC101246... 72 6e-11
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 72 6e-11
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e... 72 8e-11
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc... 72 8e-11
>gb|EOY19271.1| Retrotransposon protein, putative [Theobroma cacao]
Length = 277
Score = 100 bits (249), Expect = 2e-19
Identities = 48/90 (53%), Positives = 68/90 (75%)
Frame = +1
Query: 4 RYQILGDLIQTRMIEGSSVHDHVIKMINMVEKLEDLGIGMDSHLYIDLILQSLPESFSQF 183
RY+I +L + +M EGSSV HV+KMI ++E+L LG+ MD L IDL+LQSLP+SFSQF
Sbjct: 99 RYEISKELFRCKMAEGSSVRPHVLKMIGLIERLRQLGLAMDHELSIDLVLQSLPDSFSQF 158
Query: 184 ITNFLKNRIETSLRGLLNMLNNAELTIKRE 273
+ NF NR+E +L LLNML+ A+ +I+++
Sbjct: 159 MLNFHMNRLEATLPELLNMLDTAKRSIRKD 188
>ref|XP_006436321.1| hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
gi|557538517|gb|ESR49561.1| hypothetical protein
CICLE_v10033628mg, partial [Citrus clementina]
Length = 263
Score = 95.5 bits (236), Expect = 6e-18
Identities = 52/89 (58%), Positives = 64/89 (71%)
Frame = +1
Query: 4 RYQILGDLIQTRMIEGSSVHDHVIKMINMVEKLEDLGIGMDSHLYIDLILQSLPESFSQF 183
RY+I L + RM EGS V++HV+KMI+ +E+LE L MD L IDLILQSLP+SFSQF
Sbjct: 104 RYEISKKLFRMRMTEGS-VNEHVLKMIDYIEQLEALNFSMDGELAIDLILQSLPDSFSQF 162
Query: 184 ITNFLKNRIETSLRGLLNMLNNAELTIKR 270
I NF N++E SL LL MLN AE IK+
Sbjct: 163 IMNFNMNKMECSLAELLKMLNTAETCIKK 191
>ref|XP_006421106.1| hypothetical protein CICLE_v10006890mg, partial [Citrus clementina]
gi|557522979|gb|ESR34346.1| hypothetical protein
CICLE_v10006890mg, partial [Citrus clementina]
Length = 182
Score = 94.7 bits (234), Expect = 1e-17
Identities = 52/89 (58%), Positives = 64/89 (71%)
Frame = +1
Query: 4 RYQILGDLIQTRMIEGSSVHDHVIKMINMVEKLEDLGIGMDSHLYIDLILQSLPESFSQF 183
RY+I L + RM EGS V++HV+KMI+ +E+LE L MD L IDLILQSLP+SFSQF
Sbjct: 23 RYKISKKLFRMRMTEGS-VNEHVLKMIDYIEQLEALNFSMDGELAIDLILQSLPDSFSQF 81
Query: 184 ITNFLKNRIETSLRGLLNMLNNAELTIKR 270
I NF N++E SL LL MLN AE IK+
Sbjct: 82 IMNFNMNKMECSLAELLKMLNTAESCIKK 110
>gb|EOY04065.1| Retrotransposon protein, putative [Theobroma cacao]
Length = 289
Score = 94.0 bits (232), Expect = 2e-17
Identities = 47/89 (52%), Positives = 65/89 (73%)
Frame = +1
Query: 4 RYQILGDLIQTRMIEGSSVHDHVIKMINMVEKLEDLGIGMDSHLYIDLILQSLPESFSQF 183
RY+I +L + +M EGSSV HV+KMI +E+L LG+ M L I+L+LQSLP+SFSQF
Sbjct: 111 RYEISKELFRCKMAEGSSVKPHVLKMIGPIERLGQLGLAMYHELSINLVLQSLPDSFSQF 170
Query: 184 ITNFLKNRIETSLRGLLNMLNNAELTIKR 270
+ NF NR+E +L LLNML+ AE +I++
Sbjct: 171 VLNFHMNRLEATLPKLLNMLDTAEKSIRK 199
>ref|XP_006432547.1| hypothetical protein CICLE_v10003434mg, partial [Citrus clementina]
gi|557534669|gb|ESR45787.1| hypothetical protein
CICLE_v10003434mg, partial [Citrus clementina]
Length = 218
Score = 93.2 bits (230), Expect = 3e-17
Identities = 51/89 (57%), Positives = 62/89 (69%)
Frame = +1
Query: 4 RYQILGDLIQTRMIEGSSVHDHVIKMINMVEKLEDLGIGMDSHLYIDLILQSLPESFSQF 183
RY+I L RM EGS V++HV+KMI+ +E+LE L MD L IDLILQSLP+SFSQF
Sbjct: 86 RYEISNKLFIMRMTEGS-VNEHVLKMIDYIEQLEALNFSMDGELAIDLILQSLPDSFSQF 144
Query: 184 ITNFLKNRIETSLRGLLNMLNNAELTIKR 270
I NF N++E SL LL M N AE IK+
Sbjct: 145 IMNFNMNKMECSLAELLKMFNTAETCIKK 173
>ref|XP_006447393.1| hypothetical protein CICLE_v10017516mg, partial [Citrus clementina]
gi|557550004|gb|ESR60633.1| hypothetical protein
CICLE_v10017516mg, partial [Citrus clementina]
Length = 140
Score = 85.5 bits (210), Expect = 7e-15
Identities = 47/89 (52%), Positives = 61/89 (68%)
Frame = +1
Query: 4 RYQILGDLIQTRMIEGSSVHDHVIKMINMVEKLEDLGIGMDSHLYIDLILQSLPESFSQF 183
RY+I L + RM EGS V+++V+KMI+ +E+ + L MD L IDLILQSLP+SFSQF
Sbjct: 3 RYEISKKLFRMRMTEGS-VNEYVLKMIDYIEQQKALNFSMDGELAIDLILQSLPDSFSQF 61
Query: 184 ITNFLKNRIETSLRGLLNMLNNAELTIKR 270
I NF N++E SL LL ML E IK+
Sbjct: 62 IMNFNMNKMECSLAELLKMLKTTETCIKK 90
>ref|XP_006376079.1| hypothetical protein POPTR_0013s08940g [Populus trichocarpa]
gi|550325317|gb|ERP53876.1| hypothetical protein
POPTR_0013s08940g [Populus trichocarpa]
Length = 88
Score = 84.3 bits (207), Expect = 1e-14
Identities = 41/78 (52%), Positives = 58/78 (74%)
Frame = +1
Query: 40 MIEGSSVHDHVIKMINMVEKLEDLGIGMDSHLYIDLILQSLPESFSQFITNFLKNRIETS 219
MIEGSSV+ HV+KMI ++KL LG MD L +DL+LQSLP+ FSQFI N+ N+++++
Sbjct: 1 MIEGSSVNIHVLKMIGYIKKLNQLGFVMDHELNVDLVLQSLPQKFSQFIMNYHINKLDST 60
Query: 220 LRGLLNMLNNAELTIKRE 273
L L N+LN A+ +K+E
Sbjct: 61 LPELFNILNIAKRALKKE 78
>ref|XP_006339985.1| PREDICTED: uncharacterized protein LOC102579577 [Solanum tuberosum]
Length = 185
Score = 82.8 bits (203), Expect = 4e-14
Identities = 40/84 (47%), Positives = 60/84 (71%)
Frame = +1
Query: 25 LIQTRMIEGSSVHDHVIKMINMVEKLEDLGIGMDSHLYIDLILQSLPESFSQFITNFLKN 204
L+ T+M EGSSV +HV+K++N + +LE LG +D +++ILQ+LP+SF QF N+ N
Sbjct: 24 LLTTKMAEGSSVREHVLKLMNYLNELEILGAEIDKESQVEMILQTLPDSFQQFRVNYNMN 83
Query: 205 RIETSLRGLLNMLNNAELTIKREA 276
+++ SL LLN L AE TIK++A
Sbjct: 84 KMDMSLEKLLNELQAAETTIKQQA 107
>ref|XP_006386829.1| hypothetical protein POPTR_0002s22700g [Populus trichocarpa]
gi|550345621|gb|ERP64626.1| hypothetical protein
POPTR_0002s22700g [Populus trichocarpa]
Length = 171
Score = 82.0 bits (201), Expect = 7e-14
Identities = 39/80 (48%), Positives = 58/80 (72%)
Frame = +1
Query: 4 RYQILGDLIQTRMIEGSSVHDHVIKMINMVEKLEDLGIGMDSHLYIDLILQSLPESFSQF 183
RYQ +L + +M +GSS++ HV+KM +EKLE LG MD L ++L+LQSLP++FSQF
Sbjct: 84 RYQTSKELFRCKMTKGSSMNTHVLKMNGYIEKLEQLGFVMDRKLSVELVLQSLPQNFSQF 143
Query: 184 ITNFLKNRIETSLRGLLNML 243
I N+ N+++++L L NML
Sbjct: 144 IMNYHMNKLDSTLPELFNML 163
>gb|ABI34377.1| Polyprotein, putative [Solanum demissum]
Length = 233
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/85 (45%), Positives = 59/85 (69%)
Frame = +1
Query: 25 LIQTRMIEGSSVHDHVIKMINMVEKLEDLGIGMDSHLYIDLILQSLPESFSQFITNFLKN 204
L+ T+M+EG+ V DHV+KMI ++ +LE LG +D+ +++ILQSLP+SF QF N+ N
Sbjct: 119 LMNTKMVEGTPVRDHVLKMIGLLNELEVLGAEIDNDSQVEMILQSLPDSFQQFCLNYNMN 178
Query: 205 RIETSLRGLLNMLNNAELTIKREAS 279
++ SL LLN L AE +K+ +S
Sbjct: 179 KMSLSLAQLLNELQAAETLVKKASS 203
>ref|XP_006366682.1| PREDICTED: uncharacterized protein LOC102594868 [Solanum tuberosum]
Length = 651
Score = 79.7 bits (195), Expect = 4e-13
Identities = 39/84 (46%), Positives = 59/84 (70%)
Frame = +1
Query: 25 LIQTRMIEGSSVHDHVIKMINMVEKLEDLGIGMDSHLYIDLILQSLPESFSQFITNFLKN 204
L+ T+M EGSSV +HV+K++N + +LE LG +D +++ILQ+LP+SF QF N+ N
Sbjct: 490 LLTTKMAEGSSVREHVLKLMNYLNELEILGAEIDKESQVEMILQTLPDSFQQFRLNYNMN 549
Query: 205 RIETSLRGLLNMLNNAELTIKREA 276
+++ SL LLN L AE IK++A
Sbjct: 550 KMDMSLAKLLNELQAAETIIKQQA 573
>ref|XP_006384319.1| hypothetical protein POPTR_0004s12480g, partial [Populus
trichocarpa] gi|550340900|gb|ERP62116.1| hypothetical
protein POPTR_0004s12480g, partial [Populus trichocarpa]
Length = 164
Score = 75.9 bits (185), Expect = 5e-12
Identities = 40/90 (44%), Positives = 58/90 (64%)
Frame = +1
Query: 4 RYQILGDLIQTRMIEGSSVHDHVIKMINMVEKLEDLGIGMDSHLYIDLILQSLPESFSQF 183
RY+ L +M V+ HV KMI +EKL+ LG +D L +DL+LQSL +SFSQF
Sbjct: 69 RYETSKKLFHCKMRWVFLVNTHVFKMIGYIEKLDQLGFVIDHKLSVDLVLQSLLQSFSQF 128
Query: 184 ITNFLKNRIETSLRGLLNMLNNAELTIKRE 273
I N+ N+++++L LLNML A+ +K+E
Sbjct: 129 IMNYRMNKLDSTLPKLLNMLKTAKGALKKE 158
>ref|XP_006381479.1| hypothetical protein POPTR_0006s13220g, partial [Populus
trichocarpa] gi|550336182|gb|ERP59276.1| hypothetical
protein POPTR_0006s13220g, partial [Populus trichocarpa]
Length = 187
Score = 75.5 bits (184), Expect = 7e-12
Identities = 40/91 (43%), Positives = 58/91 (63%)
Frame = +1
Query: 7 YQILGDLIQTRMIEGSSVHDHVIKMINMVEKLEDLGIGMDSHLYIDLILQSLPESFSQFI 186
Y+ L M EGSSV+ HV+KMI ++KL+ LG MD L +DL+L SLP++F QFI
Sbjct: 16 YETSKKLFCCMMTEGSSVNTHVLKMIGYIKKLDQLGFVMDHELSVDLVLHSLPKNFLQFI 75
Query: 187 TNFLKNRIETSLRGLLNMLNNAELTIKREAS 279
N+ N+++ L NML NA+ +K++ S
Sbjct: 76 MNYHMNKLDNI---LFNMLKNAKGILKKKKS 103
>gb|AAK52165.1|AC084831_19 putative polyprotein [Oryza sativa Japonica Group]
gi|108709282|gb|ABF97077.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 262
Score = 74.7 bits (182), Expect = 1e-11
Identities = 42/92 (45%), Positives = 53/92 (57%)
Frame = +1
Query: 4 RYQILGDLIQTRMIEGSSVHDHVIKMINMVEKLEDLGIGMDSHLYIDLILQSLPESFSQF 183
R+ L L R+ EG+ V HVIKMI E L+ LG + L DLILQSLP SF F
Sbjct: 115 RFNTLKSLFACRLAEGNPVSLHVIKMIGYTESLDKLGCPLSRELATDLILQSLPPSFEPF 174
Query: 184 ITNFLKNRIETSLRGLLNMLNNAELTIKREAS 279
I NF N + +SL L ML AE +IK+ ++
Sbjct: 175 IMNFNMNNLNSSLAELHGMLKTAEESIKKNSN 206
>ref|XP_004235103.1| PREDICTED: uncharacterized protein LOC101251161 [Solanum
lycopersicum]
Length = 116
Score = 72.8 bits (177), Expect = 4e-11
Identities = 35/78 (44%), Positives = 53/78 (67%)
Frame = +1
Query: 40 MIEGSSVHDHVIKMINMVEKLEDLGIGMDSHLYIDLILQSLPESFSQFITNFLKNRIETS 219
M+E + V DHV+KMI ++ +LE LG +D+ +++ILQSLP+SF QF N+ N++ S
Sbjct: 1 MVESTPVRDHVLKMIGLLNELEVLGAEIDNDSQVEMILQSLPDSFQQFCLNYNMNKMSLS 60
Query: 220 LRGLLNMLNNAELTIKRE 273
L LLN L AE +K++
Sbjct: 61 LTQLLNDLQAAETLVKKK 78
>ref|XP_006374180.1| hypothetical protein POPTR_0015s03800g [Populus trichocarpa]
gi|550321880|gb|ERP51977.1| hypothetical protein
POPTR_0015s03800g [Populus trichocarpa]
Length = 127
Score = 72.4 bits (176), Expect = 6e-11
Identities = 34/89 (38%), Positives = 59/89 (66%)
Frame = +1
Query: 7 YQILGDLIQTRMIEGSSVHDHVIKMINMVEKLEDLGIGMDSHLYIDLILQSLPESFSQFI 186
Y+I +L +M +GS ++ HV+KMI +EKL +L +D L ++L+L SLP++FSQFI
Sbjct: 34 YKIFKELFHCKMTKGSLMNTHVLKMIGYIEKLGELDFVIDHELGVELVLLSLPQNFSQFI 93
Query: 187 TNFLKNRIETSLRGLLNMLNNAELTIKRE 273
N+ N++++ L L N+L E ++++
Sbjct: 94 INYHMNKLDSILLELFNILKTVEGPLRKK 122
>ref|XP_004241082.1| PREDICTED: uncharacterized protein LOC101246539 [Solanum
lycopersicum]
Length = 181
Score = 72.4 bits (176), Expect = 6e-11
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = +1
Query: 25 LIQTRMIEGSSVHDHVIKMINMVEKLEDLGIGMDSHLYIDLILQSLPESFSQFITNFLKN 204
L+ T+M+EG+ V DHV+KMI ++ +LE LG +D+ +++ILQSL +SF QF N+ N
Sbjct: 44 LMTTKMVEGTPVIDHVLKMIGLLNELEVLGAEIDNDSQVEMILQSLLDSFQQFCLNYNMN 103
Query: 205 RIETSLRGLLNMLNNAELTIKREA 276
++ SL LLN L A+ + + A
Sbjct: 104 KMNLSLAQLLNELQAAKTLVNKHA 127
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|62701883|gb|AAX92956.1| retrotransposon protein,
putative, Ty1-copia sub-class [Oryza sativa Japonica
Group] gi|108864259|gb|ABA92827.2| retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 72.4 bits (176), Expect = 6e-11
Identities = 41/93 (44%), Positives = 52/93 (55%)
Frame = +1
Query: 1 RRYQILGDLIQTRMIEGSSVHDHVIKMINMVEKLEDLGIGMDSHLYIDLILQSLPESFSQ 180
+R+ L R+ EG+ V HVIKMI E LE LG + L DLILQSLP SF
Sbjct: 114 KRFNTSKSLFACRLAEGNPVSPHVIKMIGYNETLEKLGFPLSQELATDLILQSLPPSFEP 173
Query: 181 FITNFLKNRIETSLRGLLNMLNNAELTIKREAS 279
FI NF N + +L L ML AE +IK+ ++
Sbjct: 174 FILNFNMNNMNRTLTKLPGMLKTAEESIKKNSN 206
>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 896
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/89 (42%), Positives = 53/89 (59%)
Frame = +1
Query: 4 RYQILGDLIQTRMIEGSSVHDHVIKMINMVEKLEDLGIGMDSHLYIDLILQSLPESFSQF 183
R++I +L ++ EG V HVIKM+ + LE LG + L DLIL SLPES+ QF
Sbjct: 119 RFEISKNLFGCKLAEGGPVSPHVIKMVGYTQSLEKLGFPLSQELATDLILASLPESYGQF 178
Query: 184 ITNFLKNRIETSLRGLLNMLNNAELTIKR 270
I NF N ++ +L L ML AE ++K+
Sbjct: 179 ILNFHMNGLDKNLTELHMMLKTAEGSVKK 207
>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1073
Score = 72.0 bits (175), Expect = 8e-11
Identities = 40/92 (43%), Positives = 51/92 (55%)
Frame = +1
Query: 4 RYQILGDLIQTRMIEGSSVHDHVIKMINMVEKLEDLGIGMDSHLYIDLILQSLPESFSQF 183
R+ L R+ EG+ V HVIKMI E L+ LG + L DLILQSLP SF F
Sbjct: 207 RFNTSKSLFACRLAEGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPF 266
Query: 184 ITNFLKNRIETSLRGLLNMLNNAELTIKREAS 279
I NF N + +L L ML AE +IK+ ++
Sbjct: 267 IMNFNMNNLNRTLAELHGMLKTAEESIKKNSN 298