BLASTX nr result

ID: Zingiber23_contig00052776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00052776
         (235 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF21695.1| NBS-type resistance protein RGC5 [Musa acuminata ...    69   7e-10

>gb|ACF21695.1| NBS-type resistance protein RGC5 [Musa acuminata subsp. malaccensis]
          Length = 1442

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 33/73 (45%), Positives = 46/73 (63%)
 Frame = +3

Query: 6    GHFPRLRVLRMIGMPLLKHIGFASVHATENDLFPVLEVLELMDLPVLEELPDLGSLPCLK 185
            G  P L+VL +  MP++K +       T++ LFP LE L L D+P L+E P++  LPCLK
Sbjct: 811  GQLPHLKVLHIKRMPVVKQMSHELCGCTKSKLFPRLEELVLEDMPTLKEFPNIAQLPCLK 870

Query: 186  SLHMKRMPMLKHI 224
             +HMK M  +KHI
Sbjct: 871  IIHMKNMFSVKHI 883



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 34/70 (48%), Positives = 43/70 (61%)
 Frame = +3

Query: 15   PRLRVLRMIGMPLLKHIGFASVHATENDLFPVLEVLELMDLPVLEELPDLGSLPCLKSLH 194
            P L+++ M  M  +KHIG       E++ FP LE L L D+  LEELP+LG LP LK +H
Sbjct: 867  PCLKIIHMKNMFSVKHIGRELYGDIESNCFPSLEELVLQDMLTLEELPNLGQLPHLKVIH 926

Query: 195  MKRMPMLKHI 224
            MK M  LK I
Sbjct: 927  MKNMSALKLI 936



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/65 (47%), Positives = 38/65 (58%)
 Frame = +3

Query: 6    GHFPRLRVLRMIGMPLLKHIGFASVHATENDLFPVLEVLELMDLPVLEELPDLGSLPCLK 185
            G  P L+V+ M  M  LK IG     + E   FP LEVL L ++  LEELP LG LPCLK
Sbjct: 917  GQLPHLKVIHMKNMSALKLIGRELCGSREKTWFPRLEVLVLKNMLALEELPSLGQLPCLK 976

Query: 186  SLHMK 200
             L ++
Sbjct: 977  VLRIQ 981


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