BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00052548
         (334 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312374.2| hypothetical protein POPTR_0008s11380g [Popu...    74   2e-11
ref|XP_002312375.2| hypothetical protein POPTR_0008s11380g [Popu...    74   2e-11
gb|EOY02176.1| Nuclear matrix constituent protein-related, putat...    73   3e-11
gb|EOY02175.1| Nuclear matrix constituent protein-related, putat...    73   3e-11
gb|EOY02174.1| Nuclear matrix constituent protein-related, putat...    73   3e-11
gb|EOY02173.1| Nuclear matrix constituent protein-related, putat...    73   3e-11
gb|EOY02172.1| Nuclear matrix constituent protein-related, putat...    73   3e-11
gb|EOY02171.1| Nuclear matrix constituent protein-related, putat...    73   3e-11
ref|XP_006306135.1| hypothetical protein CARUB_v10011605mg [Caps...    73   4e-11
ref|XP_006484395.1| PREDICTED: putative nuclear matrix constitue...    72   8e-11
ref|XP_006437755.1| hypothetical protein CICLE_v10030538mg [Citr...    72   8e-11
gb|ACJ86244.1| unknown [Medicago truncatula] gi|388508822|gb|AFK...    72   8e-11
gb|EMJ28278.1| hypothetical protein PRUPE_ppa000415mg [Prunus pe...    71   1e-10
ref|NP_563923.1| protein CROWDED NUCLEI 2 [Arabidopsis thaliana]...    70   2e-10
ref|NP_563924.1| protein CROWDED NUCLEI 2 [Arabidopsis thaliana]...    70   2e-10
ref|XP_002889994.1| hypothetical protein ARALYDRAFT_471477 [Arab...    70   2e-10
ref|XP_006417143.1| hypothetical protein EUTSA_v10006601mg [Eutr...    70   3e-10
ref|XP_004489465.1| PREDICTED: putative nuclear matrix constitue...    70   4e-10
ref|XP_004297151.1| PREDICTED: putative nuclear matrix constitue...    69   8e-10
ref|XP_006574886.1| PREDICTED: putative nuclear matrix constitue...    68   1e-09

>ref|XP_002312374.2| hypothetical protein POPTR_0008s11380g [Populus trichocarpa]
           gi|550332851|gb|EEE89741.2| hypothetical protein
           POPTR_0008s11380g [Populus trichocarpa]
          Length = 1205

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 45/105 (42%), Positives = 61/105 (58%)
 Frame = +2

Query: 17  SGNFSGVVPGEGKGIKMVVGNLVRKSKVLSFWREGEDLRERQSEAEVRRQFSEVGFHDET 196
           +G  S  +  +GK + ++ G L     V S      +L     EA   R+F EVG  DE 
Sbjct: 9   AGATSTGIGAKGKALALIDGALPPPPPVGSLSVNAGELDTEDVEAW--RRFREVGLLDEA 66

Query: 197 VLQKRDREALAQKISELEKELYQYQHHMGLLLIEKNELAAKAENL 331
            +++RDREAL +K S LEKEL+ YQ++MGLLLIEK E  +K E L
Sbjct: 67  AMERRDREALLEKASRLEKELFDYQYNMGLLLIEKKEWTSKYEEL 111


>ref|XP_002312375.2| hypothetical protein POPTR_0008s11380g [Populus trichocarpa]
           gi|550332850|gb|EEE89742.2| hypothetical protein
           POPTR_0008s11380g [Populus trichocarpa]
          Length = 1149

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 45/105 (42%), Positives = 61/105 (58%)
 Frame = +2

Query: 17  SGNFSGVVPGEGKGIKMVVGNLVRKSKVLSFWREGEDLRERQSEAEVRRQFSEVGFHDET 196
           +G  S  +  +GK + ++ G L     V S      +L     EA   R+F EVG  DE 
Sbjct: 9   AGATSTGIGAKGKALALIDGALPPPPPVGSLSVNAGELDTEDVEAW--RRFREVGLLDEA 66

Query: 197 VLQKRDREALAQKISELEKELYQYQHHMGLLLIEKNELAAKAENL 331
            +++RDREAL +K S LEKEL+ YQ++MGLLLIEK E  +K E L
Sbjct: 67  AMERRDREALLEKASRLEKELFDYQYNMGLLLIEKKEWTSKYEEL 111


>gb|EOY02176.1| Nuclear matrix constituent protein-related, putative isoform 6
           [Theobroma cacao]
          Length = 1179

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 33/58 (56%), Positives = 45/58 (77%)
 Frame = +2

Query: 161 RQFSEVGFHDETVLQKRDREALAQKISELEKELYQYQHHMGLLLIEKNELAAKAENLT 334
           R+F E GF DE  L++RD EAL +++S+LE+EL+ YQ++MGLLLIEK E  +K E LT
Sbjct: 76  RRFKEAGFLDEAALERRDHEALVERLSKLERELFDYQYNMGLLLIEKKEWTSKCEELT 133


>gb|EOY02175.1| Nuclear matrix constituent protein-related, putative isoform 5
           [Theobroma cacao]
          Length = 1188

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 33/58 (56%), Positives = 45/58 (77%)
 Frame = +2

Query: 161 RQFSEVGFHDETVLQKRDREALAQKISELEKELYQYQHHMGLLLIEKNELAAKAENLT 334
           R+F E GF DE  L++RD EAL +++S+LE+EL+ YQ++MGLLLIEK E  +K E LT
Sbjct: 76  RRFKEAGFLDEAALERRDHEALVERLSKLERELFDYQYNMGLLLIEKKEWTSKCEELT 133


>gb|EOY02174.1| Nuclear matrix constituent protein-related, putative isoform 4
           [Theobroma cacao]
          Length = 1195

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 33/58 (56%), Positives = 45/58 (77%)
 Frame = +2

Query: 161 RQFSEVGFHDETVLQKRDREALAQKISELEKELYQYQHHMGLLLIEKNELAAKAENLT 334
           R+F E GF DE  L++RD EAL +++S+LE+EL+ YQ++MGLLLIEK E  +K E LT
Sbjct: 76  RRFKEAGFLDEAALERRDHEALVERLSKLERELFDYQYNMGLLLIEKKEWTSKCEELT 133


>gb|EOY02173.1| Nuclear matrix constituent protein-related, putative isoform 3
           [Theobroma cacao]
          Length = 1080

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 33/58 (56%), Positives = 45/58 (77%)
 Frame = +2

Query: 161 RQFSEVGFHDETVLQKRDREALAQKISELEKELYQYQHHMGLLLIEKNELAAKAENLT 334
           R+F E GF DE  L++RD EAL +++S+LE+EL+ YQ++MGLLLIEK E  +K E LT
Sbjct: 76  RRFKEAGFLDEAALERRDHEALVERLSKLERELFDYQYNMGLLLIEKKEWTSKCEELT 133


>gb|EOY02172.1| Nuclear matrix constituent protein-related, putative isoform 2
           [Theobroma cacao]
          Length = 1079

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 33/58 (56%), Positives = 45/58 (77%)
 Frame = +2

Query: 161 RQFSEVGFHDETVLQKRDREALAQKISELEKELYQYQHHMGLLLIEKNELAAKAENLT 334
           R+F E GF DE  L++RD EAL +++S+LE+EL+ YQ++MGLLLIEK E  +K E LT
Sbjct: 76  RRFKEAGFLDEAALERRDHEALVERLSKLERELFDYQYNMGLLLIEKKEWTSKCEELT 133


>gb|EOY02171.1| Nuclear matrix constituent protein-related, putative isoform 1
           [Theobroma cacao]
          Length = 1198

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 33/58 (56%), Positives = 45/58 (77%)
 Frame = +2

Query: 161 RQFSEVGFHDETVLQKRDREALAQKISELEKELYQYQHHMGLLLIEKNELAAKAENLT 334
           R+F E GF DE  L++RD EAL +++S+LE+EL+ YQ++MGLLLIEK E  +K E LT
Sbjct: 76  RRFKEAGFLDEAALERRDHEALVERLSKLERELFDYQYNMGLLLIEKKEWTSKCEELT 133


>ref|XP_006306135.1| hypothetical protein CARUB_v10011605mg [Capsella rubella]
           gi|482574846|gb|EOA39033.1| hypothetical protein
           CARUB_v10011605mg [Capsella rubella]
          Length = 1169

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 35/57 (61%), Positives = 44/57 (77%)
 Frame = +2

Query: 161 RQFSEVGFHDETVLQKRDREALAQKISELEKELYQYQHHMGLLLIEKNELAAKAENL 331
           R+F EVG  DE  ++K+DREAL +K+S LEKELY YQH+MGLLL+E  E A+K E L
Sbjct: 65  RRFREVGLLDEASMEKKDREALLEKVSTLEKELYGYQHNMGLLLMENKEWASKHEQL 121


>ref|XP_006484395.1| PREDICTED: putative nuclear matrix constituent protein 1-like
           protein-like [Citrus sinensis]
          Length = 1222

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 33/57 (57%), Positives = 44/57 (77%)
 Frame = +2

Query: 161 RQFSEVGFHDETVLQKRDREALAQKISELEKELYQYQHHMGLLLIEKNELAAKAENL 331
           R+F E G  DE  ++++DREAL +K+S+LEKELY YQ++MGLLLIEK E  +K E L
Sbjct: 75  RRFREAGLLDEATMERKDREALMEKVSKLEKELYDYQYNMGLLLIEKKEWTSKIEEL 131


>ref|XP_006437755.1| hypothetical protein CICLE_v10030538mg [Citrus clementina]
           gi|557539951|gb|ESR50995.1| hypothetical protein
           CICLE_v10030538mg [Citrus clementina]
          Length = 1222

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 33/57 (57%), Positives = 44/57 (77%)
 Frame = +2

Query: 161 RQFSEVGFHDETVLQKRDREALAQKISELEKELYQYQHHMGLLLIEKNELAAKAENL 331
           R+F E G  DE  ++++DREAL +K+S+LEKELY YQ++MGLLLIEK E  +K E L
Sbjct: 75  RRFREAGLLDEATMERKDREALMEKVSKLEKELYDYQYNMGLLLIEKKEWTSKIEEL 131


>gb|ACJ86244.1| unknown [Medicago truncatula] gi|388508822|gb|AFK42477.1| unknown
           [Medicago truncatula]
          Length = 194

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 37/71 (52%), Positives = 50/71 (70%)
 Frame = +2

Query: 119 GEDLRERQSEAEVRRQFSEVGFHDETVLQKRDREALAQKISELEKELYQYQHHMGLLLIE 298
           G D+    S AE  ++F EVG  DE V++++D EA+ +KIS LEKELY YQ++MGLLLIE
Sbjct: 55  GGDVVVASSYAEDWKKFREVGLLDEAVMKRKDDEAMMEKISRLEKELYDYQYNMGLLLIE 114

Query: 299 KNELAAKAENL 331
           K E ++K   L
Sbjct: 115 KQEWSSKFNRL 125


>gb|EMJ28278.1| hypothetical protein PRUPE_ppa000415mg [Prunus persica]
          Length = 1198

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 33/57 (57%), Positives = 45/57 (78%)
 Frame = +2

Query: 161 RQFSEVGFHDETVLQKRDREALAQKISELEKELYQYQHHMGLLLIEKNELAAKAENL 331
           R+F EVG  +E  ++++DR+ALA K+S+L+KELY YQ++MGLLLIEK E A K E L
Sbjct: 68  RRFKEVGLLNEAAMERKDRQALADKVSKLQKELYDYQYNMGLLLIEKKEWALKHEEL 124


>ref|NP_563923.1| protein CROWDED NUCLEI 2 [Arabidopsis thaliana]
           gi|332190865|gb|AEE28986.1| protein CROWDED NUCLEI 2
           [Arabidopsis thaliana]
          Length = 391

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 34/57 (59%), Positives = 44/57 (77%)
 Frame = +2

Query: 161 RQFSEVGFHDETVLQKRDREALAQKISELEKELYQYQHHMGLLLIEKNELAAKAENL 331
           R+F EVG  +E  ++K+D+EAL +KIS LEKELY YQH+MGLLL+E  EL +K E L
Sbjct: 77  RRFREVGLLNEASMEKKDQEALLEKISTLEKELYGYQHNMGLLLMENKELVSKHEQL 133


>ref|NP_563924.1| protein CROWDED NUCLEI 2 [Arabidopsis thaliana]
           gi|4850405|gb|AAD31075.1|AC007357_24 Similar to
           gb|D64087 nuclear matrix constituent protein 1 (NMCP1)
           from Daucus carota [Arabidopsis thaliana]
           gi|332190866|gb|AEE28987.1| protein CROWDED NUCLEI 2
           [Arabidopsis thaliana]
          Length = 1128

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 34/57 (59%), Positives = 44/57 (77%)
 Frame = +2

Query: 161 RQFSEVGFHDETVLQKRDREALAQKISELEKELYQYQHHMGLLLIEKNELAAKAENL 331
           R+F EVG  +E  ++K+D+EAL +KIS LEKELY YQH+MGLLL+E  EL +K E L
Sbjct: 64  RRFREVGLLNEASMEKKDQEALLEKISTLEKELYGYQHNMGLLLMENKELVSKHEQL 120


>ref|XP_002889994.1| hypothetical protein ARALYDRAFT_471477 [Arabidopsis lyrata subsp.
           lyrata] gi|297335836|gb|EFH66253.1| hypothetical protein
           ARALYDRAFT_471477 [Arabidopsis lyrata subsp. lyrata]
          Length = 373

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 34/57 (59%), Positives = 44/57 (77%)
 Frame = +2

Query: 161 RQFSEVGFHDETVLQKRDREALAQKISELEKELYQYQHHMGLLLIEKNELAAKAENL 331
           R+F EVG  +E  ++K+D+EAL +KIS LEKELY YQH+MGLLL+E  EL +K E L
Sbjct: 64  RRFREVGLLNEASMEKKDQEALLEKISTLEKELYGYQHNMGLLLMENKELVSKHEQL 120


>ref|XP_006417143.1| hypothetical protein EUTSA_v10006601mg [Eutrema salsugineum]
           gi|557094914|gb|ESQ35496.1| hypothetical protein
           EUTSA_v10006601mg [Eutrema salsugineum]
          Length = 1178

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 34/57 (59%), Positives = 43/57 (75%)
 Frame = +2

Query: 161 RQFSEVGFHDETVLQKRDREALAQKISELEKELYQYQHHMGLLLIEKNELAAKAENL 331
           R+F EVG  DE  ++++DREAL +KIS LE+ELY YQH+MGLLL+E  E  AK E L
Sbjct: 77  RRFREVGLLDEASMERKDREALLEKISTLEEELYGYQHNMGLLLMENKEWVAKHEEL 133


>ref|XP_004489465.1| PREDICTED: putative nuclear matrix constituent protein 1-like
           protein-like [Cicer arietinum]
          Length = 1215

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 32/61 (52%), Positives = 48/61 (78%)
 Frame = +2

Query: 149 AEVRRQFSEVGFHDETVLQKRDREALAQKISELEKELYQYQHHMGLLLIEKNELAAKAEN 328
           AE  ++F EVG  DE V+Q++D+EA+ +K+S LE+EL+ YQ++MGLLLIEK E ++K + 
Sbjct: 65  AEDWKKFREVGLLDEAVMQRKDQEAILEKVSRLERELFDYQYNMGLLLIEKKEWSSKFDR 124

Query: 329 L 331
           L
Sbjct: 125 L 125


>ref|XP_004297151.1| PREDICTED: putative nuclear matrix constituent protein 1-like
           protein-like [Fragaria vesca subsp. vesca]
          Length = 1148

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 32/58 (55%), Positives = 41/58 (70%)
 Frame = +2

Query: 161 RQFSEVGFHDETVLQKRDREALAQKISELEKELYQYQHHMGLLLIEKNELAAKAENLT 334
           R+F EVG  DE  +++RDR+ LA K+  LE ELY YQH+MGLLLIEK E   + E L+
Sbjct: 59  RRFKEVGLLDEAAMERRDRQELANKVDRLEAELYDYQHNMGLLLIEKKEWELQHEELS 116


>ref|XP_006574886.1| PREDICTED: putative nuclear matrix constituent protein 1-like
           protein-like isoform X2 [Glycine max]
          Length = 1211

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 31/62 (50%), Positives = 48/62 (77%)
 Frame = +2

Query: 146 EAEVRRQFSEVGFHDETVLQKRDREALAQKISELEKELYQYQHHMGLLLIEKNELAAKAE 325
           +AE  ++F+++G  DE V+Q++D EAL +K+S LE+EL+ YQ++MGLLLIEK E  +K +
Sbjct: 56  DAEDWKRFTKLGLLDEAVMQRKDHEALVEKVSRLERELFDYQYNMGLLLIEKKEWNSKFD 115

Query: 326 NL 331
            L
Sbjct: 116 QL 117