BLASTX nr result
ID: Zingiber23_contig00052512
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00052512
(246 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008854585.1| RNA polymerase beta [Curcuma roscoeana] gi|5... 168 6e-40
gb|AHA12746.1| RNA polymerase beta [Canna indica] 168 6e-40
ref|YP_008854416.1| RNA polymerase beta [Musa textilis] gi|55763... 168 6e-40
emb|CCW72366.1| rpoC1 (chloroplast) [Musa acuminata subsp. malac... 168 6e-40
gb|AGE93361.1| RNA polymerase beta [Alpinia zerumbet] 168 6e-40
ref|YP_007475610.1| RNA polymerase beta [Heliconia collinsiana] ... 168 6e-40
gb|ABU85440.1| RNA polymerase beta subunit [Musa acuminata] 168 6e-40
gb|AHH24324.1| RNA polymerase beta (chloroplast) [Japonolirion o... 167 1e-39
ref|YP_008854502.1| RNA polymerase beta [Ravenala madagascariens... 167 1e-39
gb|AAZ03990.1| RNA polymerase beta' chain [Yucca schidigera] 167 1e-39
gb|AAZ03989.1| RNA polymerase beta' chain [Typha latifolia] 167 1e-39
gb|AEZ01418.1| RNA polymerase beta (chloroplast) [Japonolirion o... 167 1e-39
gb|AEX94509.1| RNA polymerase beta (chloroplast) [Xeronema calli... 167 1e-39
gb|AEX94505.1| RNA polymerase beta (chloroplast) [Dichelostemma ... 167 1e-39
gb|AEX94504.1| RNA polymerase beta (chloroplast) [Dichelostemma ... 167 1e-39
gb|AEX94503.1| RNA polymerase beta (chloroplast) [Brodiaea calif... 167 1e-39
gb|AEX94502.1| RNA polymerase beta (chloroplast) [Androstephium ... 167 1e-39
gb|AEX94501.1| RNA polymerase beta (chloroplast) [Maianthemum st... 167 1e-39
gb|AEX94500.1| RNA polymerase beta (chloroplast) [Sansevieria tr... 167 1e-39
gb|AEX94498.1| RNA polymerase beta (chloroplast) [Ophiopogon jap... 167 1e-39
>ref|YP_008854585.1| RNA polymerase beta [Curcuma roscoeana] gi|557637492|gb|AHA13087.1|
RNA polymerase beta [Curcuma roscoeana]
Length = 684
Score = 168 bits (426), Expect = 6e-40
Identities = 81/81 (100%), Positives = 81/81 (100%)
Frame = -3
Query: 244 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 65
ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM
Sbjct: 476 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 535
Query: 64 LIGLYLLTIGNRRGICANRYN 2
LIGLYLLTIGNRRGICANRYN
Sbjct: 536 LIGLYLLTIGNRRGICANRYN 556
>gb|AHA12746.1| RNA polymerase beta [Canna indica]
Length = 684
Score = 168 bits (426), Expect = 6e-40
Identities = 81/81 (100%), Positives = 81/81 (100%)
Frame = -3
Query: 244 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 65
ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM
Sbjct: 476 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 535
Query: 64 LIGLYLLTIGNRRGICANRYN 2
LIGLYLLTIGNRRGICANRYN
Sbjct: 536 LIGLYLLTIGNRRGICANRYN 556
>ref|YP_008854416.1| RNA polymerase beta [Musa textilis] gi|557636903|gb|AHA12505.1| RNA
polymerase beta [Musa textilis]
Length = 686
Score = 168 bits (426), Expect = 6e-40
Identities = 81/81 (100%), Positives = 81/81 (100%)
Frame = -3
Query: 244 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 65
ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM
Sbjct: 476 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 535
Query: 64 LIGLYLLTIGNRRGICANRYN 2
LIGLYLLTIGNRRGICANRYN
Sbjct: 536 LIGLYLLTIGNRRGICANRYN 556
>emb|CCW72366.1| rpoC1 (chloroplast) [Musa acuminata subsp. malaccensis]
Length = 686
Score = 168 bits (426), Expect = 6e-40
Identities = 81/81 (100%), Positives = 81/81 (100%)
Frame = -3
Query: 244 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 65
ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM
Sbjct: 476 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 535
Query: 64 LIGLYLLTIGNRRGICANRYN 2
LIGLYLLTIGNRRGICANRYN
Sbjct: 536 LIGLYLLTIGNRRGICANRYN 556
>gb|AGE93361.1| RNA polymerase beta [Alpinia zerumbet]
Length = 684
Score = 168 bits (426), Expect = 6e-40
Identities = 81/81 (100%), Positives = 81/81 (100%)
Frame = -3
Query: 244 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 65
ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM
Sbjct: 476 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 535
Query: 64 LIGLYLLTIGNRRGICANRYN 2
LIGLYLLTIGNRRGICANRYN
Sbjct: 536 LIGLYLLTIGNRRGICANRYN 556
>ref|YP_007475610.1| RNA polymerase beta [Heliconia collinsiana]
gi|449326089|gb|AGE92675.1| RNA polymerase beta
[Heliconia collinsiana]
Length = 684
Score = 168 bits (426), Expect = 6e-40
Identities = 81/81 (100%), Positives = 81/81 (100%)
Frame = -3
Query: 244 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 65
ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM
Sbjct: 476 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 535
Query: 64 LIGLYLLTIGNRRGICANRYN 2
LIGLYLLTIGNRRGICANRYN
Sbjct: 536 LIGLYLLTIGNRRGICANRYN 556
>gb|ABU85440.1| RNA polymerase beta subunit [Musa acuminata]
Length = 695
Score = 168 bits (426), Expect = 6e-40
Identities = 81/81 (100%), Positives = 81/81 (100%)
Frame = -3
Query: 244 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 65
ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM
Sbjct: 488 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 547
Query: 64 LIGLYLLTIGNRRGICANRYN 2
LIGLYLLTIGNRRGICANRYN
Sbjct: 548 LIGLYLLTIGNRRGICANRYN 568
>gb|AHH24324.1| RNA polymerase beta (chloroplast) [Japonolirion osense]
Length = 682
Score = 167 bits (423), Expect = 1e-39
Identities = 80/81 (98%), Positives = 81/81 (100%)
Frame = -3
Query: 244 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 65
ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM
Sbjct: 476 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 535
Query: 64 LIGLYLLTIGNRRGICANRYN 2
LIGLY+LTIGNRRGICANRYN
Sbjct: 536 LIGLYVLTIGNRRGICANRYN 556
>ref|YP_008854502.1| RNA polymerase beta [Ravenala madagascariensis]
gi|557636990|gb|AHA12591.1| RNA polymerase beta
[Ravenala madagascariensis]
Length = 690
Score = 167 bits (423), Expect = 1e-39
Identities = 80/81 (98%), Positives = 81/81 (100%)
Frame = -3
Query: 244 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 65
ICLHPLVCKGFNADFDGDQMAVH+PLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM
Sbjct: 476 ICLHPLVCKGFNADFDGDQMAVHLPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 535
Query: 64 LIGLYLLTIGNRRGICANRYN 2
LIGLYLLTIGNRRGICANRYN
Sbjct: 536 LIGLYLLTIGNRRGICANRYN 556
>gb|AAZ03990.1| RNA polymerase beta' chain [Yucca schidigera]
Length = 693
Score = 167 bits (423), Expect = 1e-39
Identities = 80/81 (98%), Positives = 81/81 (100%)
Frame = -3
Query: 244 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 65
ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM
Sbjct: 490 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 549
Query: 64 LIGLYLLTIGNRRGICANRYN 2
LIGLY+LTIGNRRGICANRYN
Sbjct: 550 LIGLYVLTIGNRRGICANRYN 570
>gb|AAZ03989.1| RNA polymerase beta' chain [Typha latifolia]
Length = 684
Score = 167 bits (423), Expect = 1e-39
Identities = 80/81 (98%), Positives = 81/81 (100%)
Frame = -3
Query: 244 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 65
ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM
Sbjct: 480 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 539
Query: 64 LIGLYLLTIGNRRGICANRYN 2
LIGLY+LTIGNRRGICANRYN
Sbjct: 540 LIGLYVLTIGNRRGICANRYN 560
>gb|AEZ01418.1| RNA polymerase beta (chloroplast) [Japonolirion osense]
Length = 686
Score = 167 bits (423), Expect = 1e-39
Identities = 80/81 (98%), Positives = 81/81 (100%)
Frame = -3
Query: 244 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 65
ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM
Sbjct: 480 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 539
Query: 64 LIGLYLLTIGNRRGICANRYN 2
LIGLY+LTIGNRRGICANRYN
Sbjct: 540 LIGLYVLTIGNRRGICANRYN 560
>gb|AEX94509.1| RNA polymerase beta (chloroplast) [Xeronema callistemon]
Length = 685
Score = 167 bits (423), Expect = 1e-39
Identities = 80/81 (98%), Positives = 81/81 (100%)
Frame = -3
Query: 244 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 65
ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM
Sbjct: 479 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 538
Query: 64 LIGLYLLTIGNRRGICANRYN 2
LIGLY+LTIGNRRGICANRYN
Sbjct: 539 LIGLYVLTIGNRRGICANRYN 559
>gb|AEX94505.1| RNA polymerase beta (chloroplast) [Dichelostemma congestum]
gi|372481667|gb|AEX94506.1| RNA polymerase beta
(chloroplast) [Dichelostemma ida-maia]
Length = 685
Score = 167 bits (423), Expect = 1e-39
Identities = 80/81 (98%), Positives = 81/81 (100%)
Frame = -3
Query: 244 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 65
ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM
Sbjct: 479 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 538
Query: 64 LIGLYLLTIGNRRGICANRYN 2
LIGLY+LTIGNRRGICANRYN
Sbjct: 539 LIGLYVLTIGNRRGICANRYN 559
>gb|AEX94504.1| RNA polymerase beta (chloroplast) [Dichelostemma capitatum]
Length = 685
Score = 167 bits (423), Expect = 1e-39
Identities = 80/81 (98%), Positives = 81/81 (100%)
Frame = -3
Query: 244 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 65
ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM
Sbjct: 479 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 538
Query: 64 LIGLYLLTIGNRRGICANRYN 2
LIGLY+LTIGNRRGICANRYN
Sbjct: 539 LIGLYVLTIGNRRGICANRYN 559
>gb|AEX94503.1| RNA polymerase beta (chloroplast) [Brodiaea californica]
Length = 685
Score = 167 bits (423), Expect = 1e-39
Identities = 80/81 (98%), Positives = 81/81 (100%)
Frame = -3
Query: 244 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 65
ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM
Sbjct: 479 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 538
Query: 64 LIGLYLLTIGNRRGICANRYN 2
LIGLY+LTIGNRRGICANRYN
Sbjct: 539 LIGLYVLTIGNRRGICANRYN 559
>gb|AEX94502.1| RNA polymerase beta (chloroplast) [Androstephium coeruleum]
Length = 685
Score = 167 bits (423), Expect = 1e-39
Identities = 80/81 (98%), Positives = 81/81 (100%)
Frame = -3
Query: 244 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 65
ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM
Sbjct: 479 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 538
Query: 64 LIGLYLLTIGNRRGICANRYN 2
LIGLY+LTIGNRRGICANRYN
Sbjct: 539 LIGLYVLTIGNRRGICANRYN 559
>gb|AEX94501.1| RNA polymerase beta (chloroplast) [Maianthemum stellatum]
Length = 689
Score = 167 bits (423), Expect = 1e-39
Identities = 80/81 (98%), Positives = 81/81 (100%)
Frame = -3
Query: 244 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 65
ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM
Sbjct: 479 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 538
Query: 64 LIGLYLLTIGNRRGICANRYN 2
LIGLY+LTIGNRRGICANRYN
Sbjct: 539 LIGLYVLTIGNRRGICANRYN 559
>gb|AEX94500.1| RNA polymerase beta (chloroplast) [Sansevieria trifasciata]
Length = 688
Score = 167 bits (423), Expect = 1e-39
Identities = 80/81 (98%), Positives = 81/81 (100%)
Frame = -3
Query: 244 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 65
ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM
Sbjct: 479 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 538
Query: 64 LIGLYLLTIGNRRGICANRYN 2
LIGLY+LTIGNRRGICANRYN
Sbjct: 539 LIGLYVLTIGNRRGICANRYN 559
>gb|AEX94498.1| RNA polymerase beta (chloroplast) [Ophiopogon japonicus]
Length = 685
Score = 167 bits (423), Expect = 1e-39
Identities = 80/81 (98%), Positives = 81/81 (100%)
Frame = -3
Query: 244 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 65
ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM
Sbjct: 479 ICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDM 538
Query: 64 LIGLYLLTIGNRRGICANRYN 2
LIGLY+LTIGNRRGICANRYN
Sbjct: 539 LIGLYVLTIGNRRGICANRYN 559