BLASTX nr result
ID: Zingiber23_contig00051981
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00051981
(272 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004981445.1| PREDICTED: pentatricopeptide repeat-containi... 145 5e-33
dbj|BAJ88458.1| predicted protein [Hordeum vulgare subsp. vulgare] 144 2e-32
ref|XP_006650721.1| PREDICTED: pentatricopeptide repeat-containi... 143 3e-32
ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea ma... 142 6e-32
gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japo... 141 1e-31
gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indi... 141 1e-31
ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group] g... 141 1e-31
gb|EMS46552.1| hypothetical protein TRIUR3_15385 [Triticum urartu] 140 1e-31
ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containi... 139 4e-31
ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [S... 139 4e-31
gb|EMT22008.1| hypothetical protein F775_08915 [Aegilops tauschii] 133 2e-29
ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containi... 125 8e-27
gb|EOY01914.1| Pentatricopeptide repeat (PPR) superfamily protei... 121 1e-25
ref|XP_004298429.1| PREDICTED: pentatricopeptide repeat-containi... 121 1e-25
ref|XP_003613787.1| Pentatricopeptide repeat-containing protein ... 119 3e-25
gb|EMJ28099.1| hypothetical protein PRUPE_ppa016366mg [Prunus pe... 119 5e-25
ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containi... 119 5e-25
ref|XP_002316137.1| pentatricopeptide repeat-containing family p... 118 7e-25
ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containi... 117 2e-24
ref|XP_004490064.1| PREDICTED: pentatricopeptide repeat-containi... 114 2e-23
>ref|XP_004981445.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like isoform X1 [Setaria italica]
gi|514813325|ref|XP_004981446.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g02980-like isoform X2 [Setaria italica]
gi|514813327|ref|XP_004981447.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g02980-like isoform X3 [Setaria italica]
Length = 605
Score = 145 bits (366), Expect = 5e-33
Identities = 64/90 (71%), Positives = 79/90 (87%)
Frame = -2
Query: 271 MCSSHGRWEDANRIRKLMGEKGVVKVPGCSSIEVKNTVHEFFSGDGKHPQSRMAHRMVDE 92
+C++ G+WE+ NR+RKLM EKGVVKVPGCSSIE+ NTVHEFF+GDG+HP+S+ A +MVDE
Sbjct: 444 LCANTGKWEEMNRVRKLMNEKGVVKVPGCSSIEIDNTVHEFFAGDGRHPKSQEARKMVDE 503
Query: 91 VVEQLKSVGYVPDTSRVFHADMGEEAKAAS 2
V++QLK VGYVPDTS VFH +MGEE KA S
Sbjct: 504 VIDQLKLVGYVPDTSHVFHVEMGEEEKATS 533
>dbj|BAJ88458.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 144 bits (362), Expect = 2e-32
Identities = 64/90 (71%), Positives = 79/90 (87%)
Frame = -2
Query: 271 MCSSHGRWEDANRIRKLMGEKGVVKVPGCSSIEVKNTVHEFFSGDGKHPQSRMAHRMVDE 92
+C++ G+WE+ NR+RKLM EKGVVKVPGCSSIE+ N VHEFF+GDG+HPQS+ A RMVD+
Sbjct: 436 LCANTGKWEEMNRVRKLMNEKGVVKVPGCSSIEIDNRVHEFFAGDGRHPQSQDARRMVDQ 495
Query: 91 VVEQLKSVGYVPDTSRVFHADMGEEAKAAS 2
V+EQLK VGYVP+TS+VFH +MGEE KA S
Sbjct: 496 VIEQLKLVGYVPNTSQVFHVEMGEEEKATS 525
>ref|XP_006650721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like isoform X1 [Oryza brachyantha]
Length = 601
Score = 143 bits (360), Expect = 3e-32
Identities = 65/90 (72%), Positives = 76/90 (84%)
Frame = -2
Query: 271 MCSSHGRWEDANRIRKLMGEKGVVKVPGCSSIEVKNTVHEFFSGDGKHPQSRMAHRMVDE 92
+C++ GRWE+ N +RKLM EKGVVKVPGCSSIE+ N VHEFFSGDG+HP S+ A RMVDE
Sbjct: 440 LCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFFSGDGRHPHSQEARRMVDE 499
Query: 91 VVEQLKSVGYVPDTSRVFHADMGEEAKAAS 2
V+EQLK VGYVP+TS VFH +MGEE KA S
Sbjct: 500 VIEQLKLVGYVPNTSHVFHVEMGEEEKATS 529
>ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein
ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 142 bits (357), Expect = 6e-32
Identities = 62/90 (68%), Positives = 78/90 (86%)
Frame = -2
Query: 271 MCSSHGRWEDANRIRKLMGEKGVVKVPGCSSIEVKNTVHEFFSGDGKHPQSRMAHRMVDE 92
+C++ G WE+ NR+RKLM +KGVVKVPGCSSIE+ NTVHEFF+GDG+HP+S+ A +MVDE
Sbjct: 445 LCANTGYWEEMNRVRKLMSDKGVVKVPGCSSIEIDNTVHEFFAGDGRHPKSQEARKMVDE 504
Query: 91 VVEQLKSVGYVPDTSRVFHADMGEEAKAAS 2
V++QLK VGY+PDTS VFH +MGEE KA S
Sbjct: 505 VIDQLKLVGYIPDTSHVFHVEMGEEEKAIS 534
>gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 141 bits (355), Expect = 1e-31
Identities = 64/90 (71%), Positives = 75/90 (83%)
Frame = -2
Query: 271 MCSSHGRWEDANRIRKLMGEKGVVKVPGCSSIEVKNTVHEFFSGDGKHPQSRMAHRMVDE 92
+C++ GRWE+ N +RKLM EKGVVKVPGCSSIE+ N VHEFF+GDG HP S+ A RMVDE
Sbjct: 450 LCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDE 509
Query: 91 VVEQLKSVGYVPDTSRVFHADMGEEAKAAS 2
V+EQLK VGYVP+TS VFH +MGEE KA S
Sbjct: 510 VIEQLKLVGYVPNTSHVFHVEMGEEEKATS 539
>gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 141 bits (355), Expect = 1e-31
Identities = 64/90 (71%), Positives = 75/90 (83%)
Frame = -2
Query: 271 MCSSHGRWEDANRIRKLMGEKGVVKVPGCSSIEVKNTVHEFFSGDGKHPQSRMAHRMVDE 92
+C++ GRWE+ N +RKLM EKGVVKVPGCSSIE+ N VHEFF+GDG HP S+ A RMVDE
Sbjct: 450 LCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDE 509
Query: 91 VVEQLKSVGYVPDTSRVFHADMGEEAKAAS 2
V+EQLK VGYVP+TS VFH +MGEE KA S
Sbjct: 510 VIEQLKLVGYVPNTSHVFHVEMGEEEKATS 539
>ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat
containing protein [Oryza sativa Japonica Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa
Japonica Group]
Length = 611
Score = 141 bits (355), Expect = 1e-31
Identities = 64/90 (71%), Positives = 75/90 (83%)
Frame = -2
Query: 271 MCSSHGRWEDANRIRKLMGEKGVVKVPGCSSIEVKNTVHEFFSGDGKHPQSRMAHRMVDE 92
+C++ GRWE+ N +RKLM EKGVVKVPGCSSIE+ N VHEFF+GDG HP S+ A RMVDE
Sbjct: 450 LCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDE 509
Query: 91 VVEQLKSVGYVPDTSRVFHADMGEEAKAAS 2
V+EQLK VGYVP+TS VFH +MGEE KA S
Sbjct: 510 VIEQLKLVGYVPNTSHVFHVEMGEEEKATS 539
>gb|EMS46552.1| hypothetical protein TRIUR3_15385 [Triticum urartu]
Length = 547
Score = 140 bits (354), Expect = 1e-31
Identities = 64/90 (71%), Positives = 76/90 (84%)
Frame = -2
Query: 271 MCSSHGRWEDANRIRKLMGEKGVVKVPGCSSIEVKNTVHEFFSGDGKHPQSRMAHRMVDE 92
+C++ G WE+ NR+RKLM EKG VKVPGCSSIE+ N VHEFF+GDG+HPQS+ A RMVDE
Sbjct: 386 LCANTGEWEEMNRVRKLMNEKGAVKVPGCSSIEIDNRVHEFFAGDGRHPQSQDACRMVDE 445
Query: 91 VVEQLKSVGYVPDTSRVFHADMGEEAKAAS 2
V+EQLK VGYVP+TS+VFH MGEE KA S
Sbjct: 446 VIEQLKLVGYVPNTSQVFHVQMGEEEKATS 475
>ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 139 bits (350), Expect = 4e-31
Identities = 64/90 (71%), Positives = 75/90 (83%)
Frame = -2
Query: 271 MCSSHGRWEDANRIRKLMGEKGVVKVPGCSSIEVKNTVHEFFSGDGKHPQSRMAHRMVDE 92
+C++ GRWE+ NR+RKLM EKGVVKVPGCSSIEV N VHEFF+GDG+HP+S A RMVD
Sbjct: 454 LCANTGRWEEMNRVRKLMNEKGVVKVPGCSSIEVDNRVHEFFAGDGRHPKSLDARRMVDG 513
Query: 91 VVEQLKSVGYVPDTSRVFHADMGEEAKAAS 2
V+EQLK GYVP+TS VFH +MGEE KA S
Sbjct: 514 VIEQLKLAGYVPNTSHVFHVEMGEEEKAVS 543
>ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein
SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 139 bits (350), Expect = 4e-31
Identities = 62/90 (68%), Positives = 77/90 (85%)
Frame = -2
Query: 271 MCSSHGRWEDANRIRKLMGEKGVVKVPGCSSIEVKNTVHEFFSGDGKHPQSRMAHRMVDE 92
+C++ G WE+ N +RKLM EKGVVKVPGCSSIE+ NTVHEFF+GDG+HP+S+ A +MVDE
Sbjct: 445 LCANTGYWEEMNMVRKLMSEKGVVKVPGCSSIEIDNTVHEFFAGDGRHPKSQEARKMVDE 504
Query: 91 VVEQLKSVGYVPDTSRVFHADMGEEAKAAS 2
V++QLK VGYVP+TS VFH +MGEE KA S
Sbjct: 505 VIDQLKLVGYVPNTSHVFHVEMGEEEKAIS 534
>gb|EMT22008.1| hypothetical protein F775_08915 [Aegilops tauschii]
Length = 558
Score = 133 bits (335), Expect = 2e-29
Identities = 61/90 (67%), Positives = 75/90 (83%)
Frame = -2
Query: 271 MCSSHGRWEDANRIRKLMGEKGVVKVPGCSSIEVKNTVHEFFSGDGKHPQSRMAHRMVDE 92
+C++ G WE+ NR+RKLM EKGVVKVPGCSSIE+ N VHEFF+GD +HP +R RMVD+
Sbjct: 334 LCANTGEWEEMNRVRKLMNEKGVVKVPGCSSIEIDNRVHEFFAGDARHPHAR---RMVDQ 390
Query: 91 VVEQLKSVGYVPDTSRVFHADMGEEAKAAS 2
V+EQLK VGYVP+TS+VFH +MGEE KA S
Sbjct: 391 VIEQLKLVGYVPNTSQVFHVEMGEEEKATS 420
>ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera] gi|296086362|emb|CBI31951.3| unnamed
protein product [Vitis vinifera]
Length = 595
Score = 125 bits (313), Expect = 8e-27
Identities = 56/87 (64%), Positives = 69/87 (79%)
Frame = -2
Query: 271 MCSSHGRWEDANRIRKLMGEKGVVKVPGCSSIEVKNTVHEFFSGDGKHPQSRMAHRMVDE 92
+C+ GRWED N +RKLM E+GVVK+PGCSS+EV N VHEFFSGDG H S H+ +DE
Sbjct: 434 LCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDE 493
Query: 91 VVEQLKSVGYVPDTSRVFHADMGEEAK 11
+V++LK VGYVP+TS VFHADM +E K
Sbjct: 494 LVKELKLVGYVPNTSLVFHADMEDEEK 520
>gb|EOY01914.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 604
Score = 121 bits (303), Expect = 1e-25
Identities = 56/90 (62%), Positives = 70/90 (77%)
Frame = -2
Query: 271 MCSSHGRWEDANRIRKLMGEKGVVKVPGCSSIEVKNTVHEFFSGDGKHPQSRMAHRMVDE 92
+C+ GRWED + +RKLM ++GVVKVPGCSSIEV N VHEFFSGDG + S H+ +DE
Sbjct: 443 LCARAGRWEDVDFLRKLMKDRGVVKVPGCSSIEVDNVVHEFFSGDGVNTVSTSLHKALDE 502
Query: 91 VVEQLKSVGYVPDTSRVFHADMGEEAKAAS 2
++++LK VGYVPDTS VFH +MGEE K S
Sbjct: 503 LMKELKMVGYVPDTSLVFHPEMGEEEKEIS 532
>ref|XP_004298429.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Fragaria vesca subsp. vesca]
Length = 593
Score = 121 bits (303), Expect = 1e-25
Identities = 53/90 (58%), Positives = 71/90 (78%)
Frame = -2
Query: 271 MCSSHGRWEDANRIRKLMGEKGVVKVPGCSSIEVKNTVHEFFSGDGKHPQSRMAHRMVDE 92
+C+ GRWED + +RKLM ++GVVK+PGCSSIE+KN VHEFFSGDG+ S++ H+ VDE
Sbjct: 432 LCARAGRWEDVDYLRKLMKDRGVVKIPGCSSIEMKNVVHEFFSGDGERSVSKVLHQAVDE 491
Query: 91 VVEQLKSVGYVPDTSRVFHADMGEEAKAAS 2
++E+LK GYVPDTS VFH+DM + + S
Sbjct: 492 LIEELKLAGYVPDTSLVFHSDMDDRDRELS 521
>ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 586
Score = 119 bits (299), Expect = 3e-25
Identities = 52/87 (59%), Positives = 68/87 (78%)
Frame = -2
Query: 271 MCSSHGRWEDANRIRKLMGEKGVVKVPGCSSIEVKNTVHEFFSGDGKHPQSRMAHRMVDE 92
+C+ +G+W+D N +RK M +KG VK+PGCSSIEV N VHEFF+G+G H S HR +DE
Sbjct: 425 LCARYGKWDDVNHLRKTMIDKGAVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDE 484
Query: 91 VVEQLKSVGYVPDTSRVFHADMGEEAK 11
+V++LKS GYVPDTS VF+ADM +E K
Sbjct: 485 LVKELKSAGYVPDTSLVFYADMEDEEK 511
>gb|EMJ28099.1| hypothetical protein PRUPE_ppa016366mg [Prunus persica]
Length = 593
Score = 119 bits (297), Expect = 5e-25
Identities = 52/90 (57%), Positives = 71/90 (78%)
Frame = -2
Query: 271 MCSSHGRWEDANRIRKLMGEKGVVKVPGCSSIEVKNTVHEFFSGDGKHPQSRMAHRMVDE 92
+C+ GRWED +R+RKLM ++G+VK+PGCSSIEV N VHEFFSGDG+ S + H+ VD+
Sbjct: 432 LCARAGRWEDVDRLRKLMRDRGIVKIPGCSSIEVNNVVHEFFSGDGERSVSTVLHQAVDK 491
Query: 91 VVEQLKSVGYVPDTSRVFHADMGEEAKAAS 2
+VE+LK GYVPDTS VFH++M ++ + S
Sbjct: 492 LVEELKLAGYVPDTSLVFHSNMEDKDREVS 521
>ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 119 bits (297), Expect = 5e-25
Identities = 52/87 (59%), Positives = 68/87 (78%)
Frame = -2
Query: 271 MCSSHGRWEDANRIRKLMGEKGVVKVPGCSSIEVKNTVHEFFSGDGKHPQSRMAHRMVDE 92
+C+ +GRW+D N +RK+M +KG +KVPGCSSIEV N VHEFFSGDG H S + H +DE
Sbjct: 448 LCARNGRWDDVNHLRKMMVDKGALKVPGCSSIEVNNVVHEFFSGDGVHSTSTILHHALDE 507
Query: 91 VVEQLKSVGYVPDTSRVFHADMGEEAK 11
+V++LK GYVPDTS VF+AD+ +E K
Sbjct: 508 LVKELKLAGYVPDTSLVFYADIEDEEK 534
>ref|XP_002316137.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222865177|gb|EEF02308.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 601
Score = 118 bits (296), Expect = 7e-25
Identities = 55/87 (63%), Positives = 66/87 (75%)
Frame = -2
Query: 271 MCSSHGRWEDANRIRKLMGEKGVVKVPGCSSIEVKNTVHEFFSGDGKHPQSRMAHRMVDE 92
+C+ G+WED + +RKLM KG VK+PGCSSIEV N VHEFFSGDG H S HR +DE
Sbjct: 440 LCARAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDE 499
Query: 91 VVEQLKSVGYVPDTSRVFHADMGEEAK 11
+V++LKSVGYVPDTS V H DM +E K
Sbjct: 500 LVKELKSVGYVPDTSLVVHPDMEDEEK 526
>ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 117 bits (293), Expect = 2e-24
Identities = 54/82 (65%), Positives = 65/82 (79%)
Frame = -2
Query: 256 GRWEDANRIRKLMGEKGVVKVPGCSSIEVKNTVHEFFSGDGKHPQSRMAHRMVDEVVEQL 77
GRWED N +RKLM ++GVVKVPGCSS+EV N VHEFFSGDG H S R +DE+++++
Sbjct: 448 GRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEI 507
Query: 76 KSVGYVPDTSRVFHADMGEEAK 11
K VGYVPDTS V+HADM EE K
Sbjct: 508 KLVGYVPDTSLVYHADMEEEGK 529
>ref|XP_004490064.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cicer arietinum]
Length = 602
Score = 114 bits (284), Expect = 2e-23
Identities = 51/87 (58%), Positives = 65/87 (74%)
Frame = -2
Query: 271 MCSSHGRWEDANRIRKLMGEKGVVKVPGCSSIEVKNTVHEFFSGDGKHPQSRMAHRMVDE 92
+C+ +G+W+D N +RK+M EKG VK+PGCSSIEV N VHEFF+GDG S HR +DE
Sbjct: 441 LCARYGKWDDVNHLRKMMIEKGAVKIPGCSSIEVNNVVHEFFAGDGVSMISTTLHRALDE 500
Query: 91 VVEQLKSVGYVPDTSRVFHADMGEEAK 11
+V++LK GYV DTS VFH DM +E K
Sbjct: 501 LVKELKLAGYVADTSLVFHPDMEDEEK 527