BLASTX nr result
ID: Zingiber23_contig00051960
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00051960
(353 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY34317.1| RNA-binding family protein, putative isoform 1 [T... 130 2e-28
ref|XP_006836153.1| hypothetical protein AMTR_s00101p00033020 [A... 129 3e-28
ref|NP_001042672.2| Os01g0265800 [Oryza sativa Japonica Group] g... 128 7e-28
dbj|BAA90354.1| putative UBP1 interacting protein 1a [Oryza sati... 128 7e-28
ref|XP_006481969.1| PREDICTED: protein gar2-like isoform X1 [Cit... 127 2e-27
ref|XP_006430420.1| hypothetical protein CICLE_v10011637mg [Citr... 125 5e-27
ref|XP_004148449.1| PREDICTED: uncharacterized protein LOC101211... 125 5e-27
ref|XP_002457616.1| hypothetical protein SORBIDRAFT_03g010380 [S... 125 5e-27
ref|XP_004967762.1| PREDICTED: nuclear localization sequence-bin... 125 6e-27
tpg|DAA54068.1| TPA: RNA binding protein isoform 1 [Zea mays] gi... 124 1e-26
tpg|DAA54065.1| TPA: hypothetical protein ZEAMMB73_489429 [Zea m... 124 1e-26
ref|NP_001149939.1| RNA binding protein [Zea mays] gi|195635617|... 124 1e-26
gb|ACF84316.1| unknown [Zea mays] 124 1e-26
gb|ACF83094.1| unknown [Zea mays] gi|414876935|tpg|DAA54066.1| T... 124 1e-26
ref|XP_002522097.1| Heterogeneous nuclear ribonucleoprotein A1, ... 124 2e-26
ref|XP_006645744.1| PREDICTED: heterogeneous nuclear ribonucleop... 122 4e-26
gb|EXC19709.1| Uncharacterized RNA-binding protein [Morus notabi... 122 7e-26
gb|EMJ06300.1| hypothetical protein PRUPE_ppa004648mg [Prunus pe... 122 7e-26
emb|CBI24384.3| unnamed protein product [Vitis vinifera] 122 7e-26
ref|XP_002307930.1| RNA recognition motif-containing family prot... 122 7e-26
>gb|EOY34317.1| RNA-binding family protein, putative isoform 1 [Theobroma cacao]
gi|508787062|gb|EOY34318.1| RNA-binding family protein,
putative isoform 1 [Theobroma cacao]
gi|508787063|gb|EOY34319.1| RNA-binding family protein,
putative isoform 1 [Theobroma cacao]
gi|508787064|gb|EOY34320.1| RNA-binding family protein,
putative isoform 1 [Theobroma cacao]
Length = 500
Score = 130 bits (326), Expect = 2e-28
Identities = 58/85 (68%), Positives = 69/85 (81%)
Frame = +2
Query: 2 FSKYGEVEEGPLGLDKVTGKPKGFALFVYKTIDSVKKALEEHHKNFEGHILHCQKAIDGP 181
F +YGE+EEGPLGLDK +GKPKGFALFVY++I+S ++ALEE HKNFEGH+LHCQKAIDGP
Sbjct: 276 FRQYGEIEEGPLGLDKQSGKPKGFALFVYRSIESARRALEEPHKNFEGHVLHCQKAIDGP 335
Query: 182 KPNKPGFQFHGSGAQHGRLHHGAGR 256
KPNK G+ GSG H H G+
Sbjct: 336 KPNKGGYGGSGSGGHHQYQQHQQGQ 360
>ref|XP_006836153.1| hypothetical protein AMTR_s00101p00033020 [Amborella trichopoda]
gi|548838653|gb|ERM99006.1| hypothetical protein
AMTR_s00101p00033020 [Amborella trichopoda]
Length = 481
Score = 129 bits (325), Expect = 3e-28
Identities = 59/81 (72%), Positives = 68/81 (83%)
Frame = +2
Query: 2 FSKYGEVEEGPLGLDKVTGKPKGFALFVYKTIDSVKKALEEHHKNFEGHILHCQKAIDGP 181
FSKYGE+EEGPLGLDK TGKP+GF+LFVYK+++S +KALE+ HKNFEGHILHCQKAIDGP
Sbjct: 226 FSKYGEIEEGPLGLDKQTGKPRGFSLFVYKSLESARKALEDPHKNFEGHILHCQKAIDGP 285
Query: 182 KPNKPGFQFHGSGAQHGRLHH 244
KPNKP H +G H HH
Sbjct: 286 KPNKP---THHAGQAHHHPHH 303
>ref|NP_001042672.2| Os01g0265800 [Oryza sativa Japonica Group]
gi|255673092|dbj|BAF04586.2| Os01g0265800, partial
[Oryza sativa Japonica Group]
Length = 524
Score = 128 bits (322), Expect = 7e-28
Identities = 64/94 (68%), Positives = 71/94 (75%), Gaps = 2/94 (2%)
Frame = +2
Query: 2 FSKYGEVEEGPLGLDKVTGKPKGFALFVYKTIDSVKKALEEHHKNFEGHILHCQKAIDGP 181
FSKYGE+EEGPLGLDKVTGKPKGFALFVYKT+DS KKAL+E HK FEG +LHCQKAIDGP
Sbjct: 321 FSKYGEIEEGPLGLDKVTGKPKGFALFVYKTLDSAKKALQEPHKQFEGVVLHCQKAIDGP 380
Query: 182 KPNKPG--FQFHGSGAQHGRLHHGAGRMFGPNLP 277
KPNK G +G+G GR G +LP
Sbjct: 381 KPNKGGGLGGLYGAGTSGGRKGAGGYGAHSHSLP 414
>dbj|BAA90354.1| putative UBP1 interacting protein 1a [Oryza sativa Japonica Group]
gi|125525303|gb|EAY73417.1| hypothetical protein
OsI_01299 [Oryza sativa Indica Group]
gi|125569833|gb|EAZ11348.1| hypothetical protein
OsJ_01215 [Oryza sativa Japonica Group]
gi|215712214|dbj|BAG94341.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215766461|dbj|BAG98769.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 490
Score = 128 bits (322), Expect = 7e-28
Identities = 64/94 (68%), Positives = 71/94 (75%), Gaps = 2/94 (2%)
Frame = +2
Query: 2 FSKYGEVEEGPLGLDKVTGKPKGFALFVYKTIDSVKKALEEHHKNFEGHILHCQKAIDGP 181
FSKYGE+EEGPLGLDKVTGKPKGFALFVYKT+DS KKAL+E HK FEG +LHCQKAIDGP
Sbjct: 287 FSKYGEIEEGPLGLDKVTGKPKGFALFVYKTLDSAKKALQEPHKQFEGVVLHCQKAIDGP 346
Query: 182 KPNKPG--FQFHGSGAQHGRLHHGAGRMFGPNLP 277
KPNK G +G+G GR G +LP
Sbjct: 347 KPNKGGGLGGLYGAGTSGGRKGAGGYGAHSHSLP 380
>ref|XP_006481969.1| PREDICTED: protein gar2-like isoform X1 [Citrus sinensis]
Length = 474
Score = 127 bits (318), Expect = 2e-27
Identities = 60/88 (68%), Positives = 70/88 (79%)
Frame = +2
Query: 2 FSKYGEVEEGPLGLDKVTGKPKGFALFVYKTIDSVKKALEEHHKNFEGHILHCQKAIDGP 181
FSKYGE+EEGPLG+DK TGKPKGF LFVYKT+D+ KKALEE HKNFEGHIL+CQKAIDGP
Sbjct: 268 FSKYGEIEEGPLGIDKATGKPKGFCLFVYKTVDAAKKALEEPHKNFEGHILNCQKAIDGP 327
Query: 182 KPNKPGFQFHGSGAQHGRLHHGAGRMFG 265
KP K + H + H + + GAG + G
Sbjct: 328 KPGKS--RHHNAQNPHFQRNEGAGYVGG 353
>ref|XP_006430420.1| hypothetical protein CICLE_v10011637mg [Citrus clementina]
gi|557532477|gb|ESR43660.1| hypothetical protein
CICLE_v10011637mg [Citrus clementina]
Length = 476
Score = 125 bits (315), Expect = 5e-27
Identities = 59/88 (67%), Positives = 70/88 (79%)
Frame = +2
Query: 2 FSKYGEVEEGPLGLDKVTGKPKGFALFVYKTIDSVKKALEEHHKNFEGHILHCQKAIDGP 181
FSKYGE+EEGPLG+DK TGKPKGF LFVYKT+D+ KKALEE HKNFEGHIL+CQ+AIDGP
Sbjct: 270 FSKYGEIEEGPLGIDKATGKPKGFCLFVYKTVDAAKKALEEPHKNFEGHILNCQRAIDGP 329
Query: 182 KPNKPGFQFHGSGAQHGRLHHGAGRMFG 265
KP K + H + H + + GAG + G
Sbjct: 330 KPGKS--RHHNAQNPHFQRNEGAGYVGG 355
>ref|XP_004148449.1| PREDICTED: uncharacterized protein LOC101211535 [Cucumis sativus]
gi|449503048|ref|XP_004161816.1| PREDICTED:
uncharacterized protein LOC101228786 [Cucumis sativus]
Length = 500
Score = 125 bits (315), Expect = 5e-27
Identities = 66/125 (52%), Positives = 80/125 (64%), Gaps = 12/125 (9%)
Frame = +2
Query: 2 FSKYGEVEEGPLGLDKVTGKPKGFALFVYKTIDSVKKALEEHHKNFEGHILHCQKAIDGP 181
FS++GEV+EGPLGLDK+TGKPKGF LFVYK+I+S KKALEE HKNFEGH+LHCQKAIDGP
Sbjct: 287 FSQFGEVDEGPLGLDKMTGKPKGFCLFVYKSIESAKKALEEPHKNFEGHVLHCQKAIDGP 346
Query: 182 KPNKPGFQFHGSGAQH---------GRLHHGAGRMF---GPNLPTSDNPPFFSGVRSLLS 325
KP K Q H A G G+G + GP + + PP G+ +
Sbjct: 347 KPGKAQHQHHTPNAPFQRNKNPNYTGGAASGSGHLMAPAGPGVGYNQGPP--QGLNPAIG 404
Query: 326 SATSA 340
A +A
Sbjct: 405 QALTA 409
>ref|XP_002457616.1| hypothetical protein SORBIDRAFT_03g010380 [Sorghum bicolor]
gi|241929591|gb|EES02736.1| hypothetical protein
SORBIDRAFT_03g010380 [Sorghum bicolor]
Length = 464
Score = 125 bits (315), Expect = 5e-27
Identities = 60/79 (75%), Positives = 68/79 (86%), Gaps = 2/79 (2%)
Frame = +2
Query: 2 FSKYGEVEEGPLGLDKVTGKPKGFALFVYKTIDSVKKALEEHHKNFEGHILHCQKAIDGP 181
F++YGE+EEGPLGLDKVTGKPKGFALFVYKTI+S KKALEE HK+F+G +LHCQKAIDGP
Sbjct: 261 FARYGEIEEGPLGLDKVTGKPKGFALFVYKTIESAKKALEEPHKHFDGVVLHCQKAIDGP 320
Query: 182 KPNKPGFQ--FHGSGAQHG 232
KPNK G F G+GA G
Sbjct: 321 KPNKLGGAGGFFGAGASSG 339
>ref|XP_004967762.1| PREDICTED: nuclear localization sequence-binding protein-like
[Setaria italica]
Length = 465
Score = 125 bits (314), Expect = 6e-27
Identities = 60/79 (75%), Positives = 68/79 (86%), Gaps = 2/79 (2%)
Frame = +2
Query: 2 FSKYGEVEEGPLGLDKVTGKPKGFALFVYKTIDSVKKALEEHHKNFEGHILHCQKAIDGP 181
F++YGE+EEGPLGLDKVTGKPKGFALFVYKTI+S KKALEE HK+FEG +LHCQKAIDGP
Sbjct: 265 FARYGEIEEGPLGLDKVTGKPKGFALFVYKTIESAKKALEEPHKHFEGVVLHCQKAIDGP 324
Query: 182 KPNKPGFQ--FHGSGAQHG 232
K NK G F+G+GA G
Sbjct: 325 KSNKIGGHGGFYGAGASSG 343
>tpg|DAA54068.1| TPA: RNA binding protein isoform 1 [Zea mays]
gi|414876938|tpg|DAA54069.1| TPA: RNA binding protein
isoform 2 [Zea mays]
Length = 454
Score = 124 bits (312), Expect = 1e-26
Identities = 60/79 (75%), Positives = 68/79 (86%), Gaps = 2/79 (2%)
Frame = +2
Query: 2 FSKYGEVEEGPLGLDKVTGKPKGFALFVYKTIDSVKKALEEHHKNFEGHILHCQKAIDGP 181
F+++GE+EEGPLGLDKVTGKPKGFALFVYKTI+S KKALEE HK+FEG +LHCQKAIDGP
Sbjct: 251 FARFGEIEEGPLGLDKVTGKPKGFALFVYKTIESAKKALEEPHKHFEGVMLHCQKAIDGP 310
Query: 182 KPNKPGFQ--FHGSGAQHG 232
KPNK G F G+GA G
Sbjct: 311 KPNKLGGAGGFFGAGASSG 329
>tpg|DAA54065.1| TPA: hypothetical protein ZEAMMB73_489429 [Zea mays]
Length = 372
Score = 124 bits (312), Expect = 1e-26
Identities = 60/79 (75%), Positives = 68/79 (86%), Gaps = 2/79 (2%)
Frame = +2
Query: 2 FSKYGEVEEGPLGLDKVTGKPKGFALFVYKTIDSVKKALEEHHKNFEGHILHCQKAIDGP 181
F+++GE+EEGPLGLDKVTGKPKGFALFVYKTI+S KKALEE HK+FEG +LHCQKAIDGP
Sbjct: 251 FARFGEIEEGPLGLDKVTGKPKGFALFVYKTIESAKKALEEPHKHFEGVMLHCQKAIDGP 310
Query: 182 KPNKPGFQ--FHGSGAQHG 232
KPNK G F G+GA G
Sbjct: 311 KPNKLGGAGGFFGAGASSG 329
>ref|NP_001149939.1| RNA binding protein [Zea mays] gi|195635617|gb|ACG37277.1| RNA
binding protein [Zea mays]
Length = 455
Score = 124 bits (312), Expect = 1e-26
Identities = 60/79 (75%), Positives = 68/79 (86%), Gaps = 2/79 (2%)
Frame = +2
Query: 2 FSKYGEVEEGPLGLDKVTGKPKGFALFVYKTIDSVKKALEEHHKNFEGHILHCQKAIDGP 181
F+++GE+EEGPLGLDKVTGKPKGFALFVYKTI+S KKALEE HK+FEG +LHCQKAIDGP
Sbjct: 252 FARFGEIEEGPLGLDKVTGKPKGFALFVYKTIESAKKALEEPHKHFEGVMLHCQKAIDGP 311
Query: 182 KPNKPGFQ--FHGSGAQHG 232
KPNK G F G+GA G
Sbjct: 312 KPNKLGGAGGFFGAGASSG 330
>gb|ACF84316.1| unknown [Zea mays]
Length = 410
Score = 124 bits (312), Expect = 1e-26
Identities = 60/79 (75%), Positives = 68/79 (86%), Gaps = 2/79 (2%)
Frame = +2
Query: 2 FSKYGEVEEGPLGLDKVTGKPKGFALFVYKTIDSVKKALEEHHKNFEGHILHCQKAIDGP 181
F+++GE+EEGPLGLDKVTGKPKGFALFVYKTI+S KKALEE HK+FEG +LHCQKAIDGP
Sbjct: 207 FARFGEIEEGPLGLDKVTGKPKGFALFVYKTIESAKKALEEPHKHFEGVMLHCQKAIDGP 266
Query: 182 KPNKPGFQ--FHGSGAQHG 232
KPNK G F G+GA G
Sbjct: 267 KPNKLGGAGGFFGAGASSG 285
>gb|ACF83094.1| unknown [Zea mays] gi|414876935|tpg|DAA54066.1| TPA: hypothetical
protein ZEAMMB73_489429 [Zea mays]
gi|414876936|tpg|DAA54067.1| TPA: hypothetical protein
ZEAMMB73_489429 [Zea mays]
Length = 379
Score = 124 bits (312), Expect = 1e-26
Identities = 60/79 (75%), Positives = 68/79 (86%), Gaps = 2/79 (2%)
Frame = +2
Query: 2 FSKYGEVEEGPLGLDKVTGKPKGFALFVYKTIDSVKKALEEHHKNFEGHILHCQKAIDGP 181
F+++GE+EEGPLGLDKVTGKPKGFALFVYKTI+S KKALEE HK+FEG +LHCQKAIDGP
Sbjct: 251 FARFGEIEEGPLGLDKVTGKPKGFALFVYKTIESAKKALEEPHKHFEGVMLHCQKAIDGP 310
Query: 182 KPNKPGFQ--FHGSGAQHG 232
KPNK G F G+GA G
Sbjct: 311 KPNKLGGAGGFFGAGASSG 329
>ref|XP_002522097.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis] gi|223538696|gb|EEF40297.1| Heterogeneous
nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 478
Score = 124 bits (310), Expect = 2e-26
Identities = 60/94 (63%), Positives = 70/94 (74%), Gaps = 2/94 (2%)
Frame = +2
Query: 2 FSKYGEVEEGPLGLDKVTGKPKGFALFVYKTIDSVKKALEEHHKNFEGHILHCQKAIDGP 181
FSK+GE+EEGPLGLDK+TGKPKGF LFVYK+++S KKALEE HKNFEGHILHCQKA+DGP
Sbjct: 258 FSKFGEIEEGPLGLDKLTGKPKGFCLFVYKSVESAKKALEEPHKNFEGHILHCQKAVDGP 317
Query: 182 KPNK--PGFQFHGSGAQHGRLHHGAGRMFGPNLP 277
K K Q H H + + AG G N+P
Sbjct: 318 KHGKSQQQQQHHNVQKSHFQRNGNAGGYSGRNVP 351
>ref|XP_006645744.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Oryza
brachyantha]
Length = 416
Score = 122 bits (307), Expect = 4e-26
Identities = 58/80 (72%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = +2
Query: 2 FSKYGEVEEGPLGLDKVTGKPKGFALFVYKTIDSVKKALEEHHKNFEGHILHCQKAIDGP 181
FSKYGE+EEGPLGLDK TGKPKGFALFVYKT++ KKAL+E HK FEG +LHCQKAIDGP
Sbjct: 217 FSKYGEIEEGPLGLDKATGKPKGFALFVYKTLEGAKKALQEPHKQFEGVVLHCQKAIDGP 276
Query: 182 KPNKPG--FQFHGSGAQHGR 235
KPNK G +G+G GR
Sbjct: 277 KPNKGGGLGGLYGAGTSGGR 296
>gb|EXC19709.1| Uncharacterized RNA-binding protein [Morus notabilis]
Length = 483
Score = 122 bits (305), Expect = 7e-26
Identities = 58/92 (63%), Positives = 65/92 (70%)
Frame = +2
Query: 2 FSKYGEVEEGPLGLDKVTGKPKGFALFVYKTIDSVKKALEEHHKNFEGHILHCQKAIDGP 181
FSKYGE+EEGPLGLDK TG+PKGF LFVYKT+D +KAL E HKNFEG+ILHCQKAIDGP
Sbjct: 274 FSKYGEIEEGPLGLDKATGRPKGFCLFVYKTVDGARKALAEPHKNFEGNILHCQKAIDGP 333
Query: 182 KPNKPGFQFHGSGAQHGRLHHGAGRMFGPNLP 277
KP K H Q + G GP +P
Sbjct: 334 KPGKSHHNQHHHHNQRNKNPGFGGAQPGPAVP 365
>gb|EMJ06300.1| hypothetical protein PRUPE_ppa004648mg [Prunus persica]
Length = 498
Score = 122 bits (305), Expect = 7e-26
Identities = 62/117 (52%), Positives = 77/117 (65%)
Frame = +2
Query: 2 FSKYGEVEEGPLGLDKVTGKPKGFALFVYKTIDSVKKALEEHHKNFEGHILHCQKAIDGP 181
FS++GE+EEGPLGLDK+TG+PKGF LFVYK+ +S K+ALEE HKNF+GHILHCQKAIDGP
Sbjct: 279 FSRFGEIEEGPLGLDKMTGRPKGFCLFVYKSPESAKRALEEPHKNFDGHILHCQKAIDGP 338
Query: 182 KPNKPGFQFHGSGAQHGRLHHGAGRMFGPNLPTSDNPPFFSGVRSLLSSATSAGHLM 352
KP K +QH HH + ++NP + G +A GHLM
Sbjct: 339 KPVK---------SQHPNQHH--HKSHNSKFQRNENPGYVGG------AAAGMGHLM 378
>emb|CBI24384.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 122 bits (305), Expect = 7e-26
Identities = 65/117 (55%), Positives = 78/117 (66%)
Frame = +2
Query: 2 FSKYGEVEEGPLGLDKVTGKPKGFALFVYKTIDSVKKALEEHHKNFEGHILHCQKAIDGP 181
F+K+GE+EEGPLGLDK TGKPKGFALFVYK+I+S ++ALEE HK FEGH LHCQKAIDGP
Sbjct: 288 FAKFGEIEEGPLGLDKSTGKPKGFALFVYKSIESSRRALEEPHKIFEGHTLHCQKAIDGP 347
Query: 182 KPNKPGFQFHGSGAQHGRLHHGAGRMFGPNLPTSDNPPFFSGVRSLLSSATSAGHLM 352
KPNKP FH QH P+ P+ + +S ++A GHLM
Sbjct: 348 KPNKP---FHHHHHQH-----------QPHYPSRKDKSKYS------ANAAGPGHLM 384
>ref|XP_002307930.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222853906|gb|EEE91453.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 474
Score = 122 bits (305), Expect = 7e-26
Identities = 57/87 (65%), Positives = 67/87 (77%), Gaps = 3/87 (3%)
Frame = +2
Query: 2 FSKYGEVEEGPLGLDKVTGKPKGFALFVYKTIDSVKKALEEHHKNFEGHILHCQKAIDGP 181
FS++GE+EEGPLGLDK TGKPKGF LFVYKT++S KKALEE HK+FEGHILHCQKA+DGP
Sbjct: 257 FSEFGEIEEGPLGLDKATGKPKGFCLFVYKTVESAKKALEEPHKSFEGHILHCQKAVDGP 316
Query: 182 ---KPNKPGFQFHGSGAQHGRLHHGAG 253
K KP Q H + H + + G G
Sbjct: 317 KHAKSQKPPQQHHNMQSSHYQRNDGGG 343