BLASTX nr result
ID: Zingiber23_contig00051738
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00051738
(583 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006648732.1| PREDICTED: pentatricopeptide repeat-containi... 243 3e-62
gb|EMT11382.1| hypothetical protein F775_11112 [Aegilops tauschii] 242 6e-62
dbj|BAK07383.1| predicted protein [Hordeum vulgare subsp. vulgare] 236 3e-60
gb|EAZ23434.1| hypothetical protein OsJ_07125 [Oryza sativa Japo... 234 9e-60
ref|NP_001047121.1| Os02g0555100 [Oryza sativa Japonica Group] g... 234 9e-60
gb|ACN28508.1| unknown [Zea mays] gi|413937254|gb|AFW71805.1| hy... 233 2e-59
ref|NP_001168520.1| uncharacterized protein LOC100382300 [Zea ma... 233 2e-59
gb|EAY86272.1| hypothetical protein OsI_07642 [Oryza sativa Indi... 233 2e-59
ref|XP_004954990.1| PREDICTED: pentatricopeptide repeat-containi... 233 4e-59
ref|XP_002452263.1| hypothetical protein SORBIDRAFT_04g022670 [S... 229 5e-58
ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containi... 223 2e-56
ref|XP_002516308.1| pentatricopeptide repeat-containing protein,... 219 3e-55
gb|EOY03681.1| Pentatricopeptide repeat superfamily protein, put... 214 1e-53
ref|XP_006347656.1| PREDICTED: pentatricopeptide repeat-containi... 211 8e-53
ref|XP_004305694.1| PREDICTED: pentatricopeptide repeat-containi... 207 1e-51
ref|XP_006581772.1| PREDICTED: pentatricopeptide repeat-containi... 207 2e-51
gb|ESW09787.1| hypothetical protein PHAVU_009G155900g [Phaseolus... 202 4e-50
ref|XP_004143404.1| PREDICTED: pentatricopeptide repeat-containi... 202 4e-50
ref|XP_004502948.1| PREDICTED: pentatricopeptide repeat-containi... 196 3e-48
ref|XP_003602633.1| Pentatricopeptide repeat-containing protein ... 194 1e-47
>ref|XP_006648732.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Oryza brachyantha]
Length = 575
Score = 243 bits (619), Expect = 3e-62
Identities = 111/193 (57%), Positives = 148/193 (76%)
Frame = +2
Query: 5 LIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMPE 184
+IM+N ++D+Y K G V+ ++ VFDQM RD V+WTS++A Y L EA VF MPE
Sbjct: 180 VIMANAIVDAYSKAGRVEDARKVFDQMTIRDSVSWTSMIAGYCRGSMLDEAVQVFEMMPE 239
Query: 185 RNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQV 364
++ ++WT+LISG+EQN EEE ALELFE+M+ +G VP PF +VS LS CA LG RG+++
Sbjct: 240 QDAIAWTALISGHEQNGEEELALELFERMVGEGVVPTPFALVSCLSVCAKLGLVARGKEM 299
Query: 365 HGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIITGYAQN 544
HGFI RRCIG + FN+F+ NALIDMY+KCGNMV+A + F MP+ DI+SWNS++TG++ N
Sbjct: 300 HGFILRRCIGSNPFNIFIHNALIDMYSKCGNMVAAMATFDRMPERDIISWNSMVTGFSHN 359
Query: 545 GHGKQSLDVFEKM 583
G GKQSL VFE+M
Sbjct: 360 GQGKQSLAVFERM 372
Score = 89.4 bits (220), Expect = 6e-16
Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 9/201 (4%)
Frame = +2
Query: 8 IMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSAR-RLQEARAVFFSMPE 184
++SN ++ Y +S F + ++ ++ SL+AA R L +A + MP
Sbjct: 40 LLSNRLVALYALLPCPAASLAAFADLPHKNAHSYNSLLAALARRRGSLPDALGLLDEMPP 99
Query: 185 --RNTVSWTSLISGYEQNKEEEAALELFEQMMA------KGFVPNPFTVVSVLSACASLG 340
RN VS+ ++IS ++ E AL +F +++ + + FTVVS SACA LG
Sbjct: 100 ATRNVVSYNTVISSLARHGREAEALRVFARLVRDRSLGQQQVAIDRFTVVSAASACAGLG 159
Query: 341 FTERGRQVHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNS 520
R+VHG + G+D V ++NA++D Y+K G + A +F M D VSW S
Sbjct: 160 DARPLREVHGAVV--VSGMDV-TVIMANAIVDAYSKAGRVEDARKVFDQMTIRDSVSWTS 216
Query: 521 IITGYAQNGHGKQSLDVFEKM 583
+I GY + +++ VFE M
Sbjct: 217 MIAGYCRGSMLDEAVQVFEMM 237
Score = 62.8 bits (151), Expect = 6e-08
Identities = 32/121 (26%), Positives = 58/121 (47%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
N+ + N +ID Y KCG++ ++ FD+ MP
Sbjct: 314 NIFIHNALIDMYSKCGNMVAAMATFDR-------------------------------MP 342
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQ 361
ER+ +SW S+++G+ N + + +L +FE+M+ P T ++VL+AC+ G GR+
Sbjct: 343 ERDIISWNSMVTGFSHNGQGKQSLAVFERMLKAEVQPTYVTFLAVLTACSHAGLVSDGRR 402
Query: 362 V 364
+
Sbjct: 403 I 403
>gb|EMT11382.1| hypothetical protein F775_11112 [Aegilops tauschii]
Length = 415
Score = 242 bits (617), Expect = 6e-62
Identities = 108/193 (55%), Positives = 149/193 (77%)
Frame = +2
Query: 5 LIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMPE 184
+IM+N M+D+Y K G V+ ++ +F+QM RD V+WTS++A Y A+R+ EA VF MPE
Sbjct: 23 VIMANAMVDAYSKAGRVEDARTLFNQMSIRDTVSWTSMIAGYCRAKRIDEAVRVFHMMPE 82
Query: 185 RNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQV 364
++T++WT+LISG+EQN EE+AALELF QM+ +G P PF +VS L ACA LG RG++V
Sbjct: 83 QDTIAWTALISGHEQNGEEDAALELFRQMLVQGMAPTPFALVSSLGACAKLGLVIRGKEV 142
Query: 365 HGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIITGYAQN 544
HGF+ RRCIG D FN+F+ NALIDMY+KCG+M +A +F MP+ D +SWNS++TG++ N
Sbjct: 143 HGFMLRRCIGSDPFNIFIHNALIDMYSKCGDMATAMLVFARMPERDFISWNSMVTGFSHN 202
Query: 545 GHGKQSLDVFEKM 583
G GKQSL VF++M
Sbjct: 203 GQGKQSLAVFKRM 215
Score = 63.5 bits (153), Expect = 4e-08
Identities = 34/121 (28%), Positives = 57/121 (47%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
N+ + N +ID Y KCGD+ + A VF MP
Sbjct: 157 NIFIHNALIDMYSKCGDMAT-------------------------------AMLVFARMP 185
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQ 361
ER+ +SW S+++G+ N + + +L +F++M+ P T ++VL+AC+ G GRQ
Sbjct: 186 ERDFISWNSMVTGFSHNGQGKQSLAVFKRMLEAEVQPTYVTFLAVLTACSHAGLVSDGRQ 245
Query: 362 V 364
+
Sbjct: 246 I 246
>dbj|BAK07383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 236 bits (602), Expect = 3e-60
Identities = 106/193 (54%), Positives = 149/193 (77%)
Frame = +2
Query: 5 LIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMPE 184
+IM+N M+D+Y K G ++ ++ +F+QM +D V+WTS++A Y A+RL EA VF MPE
Sbjct: 207 VIMANAMVDAYSKAGRMEDARTLFNQMSIQDTVSWTSMIAGYCRAKRLDEAIRVFHMMPE 266
Query: 185 RNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQV 364
++T++WT+LISG+EQN EE+AAL+LF+QM+ +G P PF +VS L ACA LG RGR+V
Sbjct: 267 QDTIAWTALISGHEQNGEEDAALDLFQQMLVEGMAPTPFALVSSLGACAKLGLVTRGREV 326
Query: 365 HGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIITGYAQN 544
HGFI RR IGLD FN+F+ NALIDMY+KCG+M +A +F M + D +SWNS++TG++ N
Sbjct: 327 HGFILRRRIGLDPFNIFIHNALIDMYSKCGDMATAMLVFARMSERDFISWNSMVTGFSHN 386
Query: 545 GHGKQSLDVFEKM 583
G GKQSL +F++M
Sbjct: 387 GQGKQSLAMFKRM 399
Score = 92.8 bits (229), Expect = 6e-17
Identities = 60/200 (30%), Positives = 106/200 (53%), Gaps = 8/200 (4%)
Frame = +2
Query: 8 IMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYT-SARRLQEARAVFFSMP- 181
++SN +I+ Y +S+ F+ + R+ ++ +L+AA + + L +A + +MP
Sbjct: 68 LLSNRLIELYAMLNSPAASRTAFEDLPYRNAHSYNNLLAALSRGSATLPDALHLLDAMPA 127
Query: 182 -ERNTVSWTSLISGYEQNKEEEAALELFEQM-----MAKGFVPNPFTVVSVLSACASLGF 343
RN VS+ ++IS +N + AL +F ++ + + F VVSV SACA +G
Sbjct: 128 SSRNVVSYNTIISALARNGRQGEALRVFARLARDRCLGPEVALDRFAVVSVASACAGMGA 187
Query: 344 TERGRQVHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSI 523
R++HG + + + V ++NA++D Y+K G M A +LF+ M D VSW S+
Sbjct: 188 LRPLREMHGAVVVSGVEV---TVIMANAMVDAYSKAGRMEDARTLFNQMSIQDTVSWTSM 244
Query: 524 ITGYAQNGHGKQSLDVFEKM 583
I GY + +++ VF M
Sbjct: 245 IAGYCRAKRLDEAIRVFHMM 264
Score = 58.5 bits (140), Expect = 1e-06
Identities = 32/121 (26%), Positives = 56/121 (46%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
N+ + N +ID Y KCGD+ + A VF M
Sbjct: 341 NIFIHNALIDMYSKCGDMAT-------------------------------AMLVFARMS 369
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQ 361
ER+ +SW S+++G+ N + + +L +F++M+ P T ++VL+AC+ G GR+
Sbjct: 370 ERDFISWNSMVTGFSHNGQGKQSLAMFKRMLDAEVQPTYVTFLAVLTACSHAGLVTDGRR 429
Query: 362 V 364
+
Sbjct: 430 I 430
>gb|EAZ23434.1| hypothetical protein OsJ_07125 [Oryza sativa Japonica Group]
Length = 596
Score = 234 bits (598), Expect = 9e-60
Identities = 110/193 (56%), Positives = 146/193 (75%)
Frame = +2
Query: 5 LIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMPE 184
+IM+N M+D+Y K G V+ ++ VFDQM RD V+WTS++A Y A L +A VF MP
Sbjct: 205 VIMANAMVDAYSKAGRVEDARGVFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFDMMPA 264
Query: 185 RNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQV 364
++ ++WT+LISG+EQN EEE ALELFE+M +G VP PF +VS L ACA +G RG++V
Sbjct: 265 QDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEV 324
Query: 365 HGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIITGYAQN 544
HGFI RR IG D FNVF+ NALIDMY+KCG+MV+A ++F M + DI+SWNS++TG++ N
Sbjct: 325 HGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHN 384
Query: 545 GHGKQSLDVFEKM 583
G GKQSL VFE+M
Sbjct: 385 GQGKQSLAVFERM 397
Score = 87.0 bits (214), Expect = 3e-15
Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 9/201 (4%)
Frame = +2
Query: 8 IMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSAR-RLQEARAVFFSMP- 181
++SN ++ Y +S FD + ++ ++ SL+AA R L +A + MP
Sbjct: 65 LLSNRLVALYALLPTPAASLAAFDDLPHKNAHSYNSLLAALARGRGTLPDALRLLDGMPP 124
Query: 182 -ERNTVSWTSLISGYEQNKEEEAALELFEQMMA------KGFVPNPFTVVSVLSACASLG 340
RN VS+ ++IS ++ E AL +F Q+ + + FTVVS SACA L
Sbjct: 125 ASRNVVSYNTVISSLARHGRESEALRVFAQLARDRGLGQQQVAIDRFTVVSAASACAGLR 184
Query: 341 FTERGRQVHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNS 520
R++HG + G++ V ++NA++D Y+K G + A +F M D VSW S
Sbjct: 185 DARHLRELHGAVV--VSGMEV-TVIMANAMVDAYSKAGRVEDARGVFDQMTIRDSVSWTS 241
Query: 521 IITGYAQNGHGKQSLDVFEKM 583
+I GY + ++ VF+ M
Sbjct: 242 MIAGYCRASMLDDAVQVFDMM 262
Score = 62.0 bits (149), Expect = 1e-07
Identities = 33/121 (27%), Positives = 58/121 (47%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
N+ + N +ID Y KCGD+ ++ VFD+ M
Sbjct: 339 NVFIHNALIDMYSKCGDMVAAMAVFDR-------------------------------ML 367
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQ 361
ER+ +SW S+++G+ N + + +L +FE+M+ P T ++VL+AC+ G GR+
Sbjct: 368 ERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHAGLVSDGRR 427
Query: 362 V 364
+
Sbjct: 428 I 428
>ref|NP_001047121.1| Os02g0555100 [Oryza sativa Japonica Group]
gi|113536652|dbj|BAF09035.1| Os02g0555100 [Oryza sativa
Japonica Group]
Length = 596
Score = 234 bits (598), Expect = 9e-60
Identities = 110/193 (56%), Positives = 146/193 (75%)
Frame = +2
Query: 5 LIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMPE 184
+IM+N M+D+Y K G V+ ++ VFDQM RD V+WTS++A Y A L +A VF MP
Sbjct: 205 VIMANAMVDAYSKAGRVEDARGVFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFDMMPA 264
Query: 185 RNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQV 364
++ ++WT+LISG+EQN EEE ALELFE+M +G VP PF +VS L ACA +G RG++V
Sbjct: 265 QDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEV 324
Query: 365 HGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIITGYAQN 544
HGFI RR IG D FNVF+ NALIDMY+KCG+MV+A ++F M + DI+SWNS++TG++ N
Sbjct: 325 HGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHN 384
Query: 545 GHGKQSLDVFEKM 583
G GKQSL VFE+M
Sbjct: 385 GQGKQSLAVFERM 397
Score = 87.0 bits (214), Expect = 3e-15
Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 9/201 (4%)
Frame = +2
Query: 8 IMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSAR-RLQEARAVFFSMP- 181
++SN ++ Y +S FD + ++ ++ SL+AA R L +A + MP
Sbjct: 65 LLSNRLVALYALLPTPAASLAAFDDLPHKNAHSYNSLLAALARGRGTLPDALRLLDGMPP 124
Query: 182 -ERNTVSWTSLISGYEQNKEEEAALELFEQMMA------KGFVPNPFTVVSVLSACASLG 340
RN VS+ ++IS ++ E AL +F Q+ + + FTVVS SACA L
Sbjct: 125 ASRNVVSYNTVISSLARHGRESEALRVFAQLARDRGLGQQQVAIDRFTVVSAASACAGLR 184
Query: 341 FTERGRQVHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNS 520
R++HG + G++ V ++NA++D Y+K G + A +F M D VSW S
Sbjct: 185 DARHLRELHGAVV--VSGMEV-TVIMANAMVDAYSKAGRVEDARGVFDQMTIRDSVSWTS 241
Query: 521 IITGYAQNGHGKQSLDVFEKM 583
+I GY + ++ VF+ M
Sbjct: 242 MIAGYCRASMLDDAVQVFDMM 262
Score = 62.0 bits (149), Expect = 1e-07
Identities = 33/121 (27%), Positives = 58/121 (47%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
N+ + N +ID Y KCGD+ ++ VFD+ M
Sbjct: 339 NVFIHNALIDMYSKCGDMVAAMAVFDR-------------------------------ML 367
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQ 361
ER+ +SW S+++G+ N + + +L +FE+M+ P T ++VL+AC+ G GR+
Sbjct: 368 ERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHAGLVSDGRR 427
Query: 362 V 364
+
Sbjct: 428 I 428
>gb|ACN28508.1| unknown [Zea mays] gi|413937254|gb|AFW71805.1| hypothetical protein
ZEAMMB73_337002 [Zea mays]
Length = 608
Score = 233 bits (595), Expect = 2e-59
Identities = 103/193 (53%), Positives = 148/193 (76%)
Frame = +2
Query: 5 LIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMPE 184
+IM+N M+++Y K V+ ++H+FDQ+ RD VTWTS+++ Y ++L EA VF MP+
Sbjct: 207 VIMANAMLNAYSKARRVEDARHLFDQVSIRDNVTWTSMISGYCQVKKLHEAVQVFDMMPD 266
Query: 185 RNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQV 364
++ ++WT+LISG+EQN EE+ ALELFEQM+AKG P PF +VS L ACA LG RG+++
Sbjct: 267 KDRIAWTALISGHEQNGEEDTALELFEQMLAKGVSPTPFVLVSALGACAKLGLVTRGKEL 326
Query: 365 HGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIITGYAQN 544
H FI RR IG FN+F+ NAL+DMY+KCG+M++A ++F WMP+ D +SWNS++TG++ N
Sbjct: 327 HCFILRRNIGSVPFNIFIHNALVDMYSKCGDMMAAMAVFDWMPERDFISWNSMVTGFSHN 386
Query: 545 GHGKQSLDVFEKM 583
G GKQSL +FE+M
Sbjct: 387 GLGKQSLAIFEEM 399
Score = 79.0 bits (193), Expect = 9e-13
Identities = 55/200 (27%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Frame = +2
Query: 8 IMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSAR-RLQEARAVFFSMP- 181
++SN ++ Y ++ F + ++ ++ +L+AA L +A +F +MP
Sbjct: 68 LLSNRLVALYSSLPSPAAAVKAFYDLPHKNAHSYNTLLAALLRRPDTLPDAFRLFDTMPA 127
Query: 182 -ERNTVSWTSLISGYEQNKEEEAALELF-----EQMMAKGFVPNPFTVVSVLSACASLGF 343
RN VS+ +L+S + + AL + ++ + G + FTVVSV +ACA +G
Sbjct: 128 DSRNLVSYNTLMSSLAHHGRQVEALRVVARLARDRFLGPGLAMDRFTVVSVATACAGIGA 187
Query: 344 TERGRQVHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSI 523
R++HG + G++ F V ++NA+++ Y+K + A LF + D V+W S+
Sbjct: 188 ARPLREMHGAVV--VSGME-FTVIMANAMLNAYSKARRVEDARHLFDQVSIRDNVTWTSM 244
Query: 524 ITGYAQNGHGKQSLDVFEKM 583
I+GY Q +++ VF+ M
Sbjct: 245 ISGYCQVKKLHEAVQVFDMM 264
Score = 67.0 bits (162), Expect = 3e-09
Identities = 36/121 (29%), Positives = 58/121 (47%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
N+ + N ++D Y KCGD+ ++ VFD W MP
Sbjct: 341 NIFIHNALVDMYSKCGDMMAAMAVFD---------W----------------------MP 369
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQ 361
ER+ +SW S+++G+ N + +L +FE+M+ G P T ++VL+AC+ G GR
Sbjct: 370 ERDFISWNSMVTGFSHNGLGKQSLAIFEEMLVAGVRPTHVTFLAVLTACSHSGLVSNGRL 429
Query: 362 V 364
V
Sbjct: 430 V 430
>ref|NP_001168520.1| uncharacterized protein LOC100382300 [Zea mays]
gi|195615774|gb|ACG29717.1| pentatricopeptide repeat
protein PPR868-14 [Zea mays] gi|223946951|gb|ACN27559.1|
unknown [Zea mays]
Length = 616
Score = 233 bits (595), Expect = 2e-59
Identities = 103/193 (53%), Positives = 148/193 (76%)
Frame = +2
Query: 5 LIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMPE 184
+IM+N M+++Y K V+ ++H+FDQ+ RD VTWTS+++ Y ++L EA VF MP+
Sbjct: 215 VIMANAMLNAYSKARRVEDARHLFDQVSIRDNVTWTSMISGYCQVKKLHEAVQVFDMMPD 274
Query: 185 RNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQV 364
++ ++WT+LISG+EQN EE+ ALELFEQM+AKG P PF +VS L ACA LG RG+++
Sbjct: 275 KDRIAWTALISGHEQNGEEDTALELFEQMLAKGVSPTPFVLVSALGACAKLGLVTRGKEL 334
Query: 365 HGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIITGYAQN 544
H FI RR IG FN+F+ NAL+DMY+KCG+M++A ++F WMP+ D +SWNS++TG++ N
Sbjct: 335 HCFILRRNIGSVPFNIFIHNALVDMYSKCGDMMAAMAVFDWMPERDFISWNSMVTGFSHN 394
Query: 545 GHGKQSLDVFEKM 583
G GKQSL +FE+M
Sbjct: 395 GLGKQSLAIFEEM 407
Score = 79.0 bits (193), Expect = 9e-13
Identities = 55/200 (27%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Frame = +2
Query: 8 IMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSAR-RLQEARAVFFSMP- 181
++SN ++ Y ++ F + ++ ++ +L+AA L +A +F +MP
Sbjct: 76 LLSNRLVALYSSLPSPAAAVKAFYDLPHKNAHSYNTLLAALLRRPDTLPDAFRLFDTMPA 135
Query: 182 -ERNTVSWTSLISGYEQNKEEEAALELF-----EQMMAKGFVPNPFTVVSVLSACASLGF 343
RN VS+ +L+S + + AL + ++ + G + FTVVSV +ACA +G
Sbjct: 136 DSRNLVSYNTLMSSLAHHGRQVEALRVVARLARDRFLGPGLAMDRFTVVSVATACAGIGA 195
Query: 344 TERGRQVHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSI 523
R++HG + G++ F V ++NA+++ Y+K + A LF + D V+W S+
Sbjct: 196 ARPLREMHGAVV--VSGME-FTVIMANAMLNAYSKARRVEDARHLFDQVSIRDNVTWTSM 252
Query: 524 ITGYAQNGHGKQSLDVFEKM 583
I+GY Q +++ VF+ M
Sbjct: 253 ISGYCQVKKLHEAVQVFDMM 272
Score = 67.0 bits (162), Expect = 3e-09
Identities = 36/121 (29%), Positives = 58/121 (47%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
N+ + N ++D Y KCGD+ ++ VFD W MP
Sbjct: 349 NIFIHNALVDMYSKCGDMMAAMAVFD---------W----------------------MP 377
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQ 361
ER+ +SW S+++G+ N + +L +FE+M+ G P T ++VL+AC+ G GR
Sbjct: 378 ERDFISWNSMVTGFSHNGLGKQSLAIFEEMLVAGVRPTHVTFLAVLTACSHSGLVSNGRL 437
Query: 362 V 364
V
Sbjct: 438 V 438
>gb|EAY86272.1| hypothetical protein OsI_07642 [Oryza sativa Indica Group]
Length = 596
Score = 233 bits (595), Expect = 2e-59
Identities = 109/193 (56%), Positives = 146/193 (75%)
Frame = +2
Query: 5 LIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMPE 184
+IM+N M+D+Y K G V+ ++ +FDQM RD V+WTS++A Y A L +A VF MP
Sbjct: 205 VIMANAMVDAYSKAGRVEDARGLFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFDMMPA 264
Query: 185 RNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQV 364
++ ++WT+LISG+EQN EEE ALELFE+M +G VP PF +VS L ACA +G RG++V
Sbjct: 265 QDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEV 324
Query: 365 HGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIITGYAQN 544
HGFI RR IG D FNVF+ NALIDMY+KCG+MV+A ++F M + DI+SWNS++TG++ N
Sbjct: 325 HGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHN 384
Query: 545 GHGKQSLDVFEKM 583
G GKQSL VFE+M
Sbjct: 385 GQGKQSLAVFERM 397
Score = 88.2 bits (217), Expect = 1e-15
Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 9/201 (4%)
Frame = +2
Query: 8 IMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSAR-RLQEARAVFFSMP- 181
++SN ++ Y +S FD + ++ ++ SL+AA R L +A + MP
Sbjct: 65 LLSNRLVALYALLPTPAASLAAFDDLPHKNAHSYNSLLAALARGRGTLPDALRLLDGMPP 124
Query: 182 -ERNTVSWTSLISGYEQNKEEEAALELFEQMMA------KGFVPNPFTVVSVLSACASLG 340
RN VS+ ++IS ++ E AL +F Q+ + + FTVVS SACA L
Sbjct: 125 ASRNVVSYNTVISSLARHGRESEALRVFAQLARDRGLGQQQVAIDRFTVVSAASACAGLR 184
Query: 341 FTERGRQVHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNS 520
R++HG + G++ V ++NA++D Y+K G + A LF M D VSW S
Sbjct: 185 DARHLRELHGAVV--VSGMEV-TVIMANAMVDAYSKAGRVEDARGLFDQMTIRDSVSWTS 241
Query: 521 IITGYAQNGHGKQSLDVFEKM 583
+I GY + ++ VF+ M
Sbjct: 242 MIAGYCRASMLDDAVQVFDMM 262
Score = 62.0 bits (149), Expect = 1e-07
Identities = 33/121 (27%), Positives = 58/121 (47%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
N+ + N +ID Y KCGD+ ++ VFD+ M
Sbjct: 339 NVFIHNALIDMYSKCGDMVAAMAVFDR-------------------------------ML 367
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQ 361
ER+ +SW S+++G+ N + + +L +FE+M+ P T ++VL+AC+ G GR+
Sbjct: 368 ERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHAGLVSDGRR 427
Query: 362 V 364
+
Sbjct: 428 I 428
>ref|XP_004954990.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Setaria italica]
Length = 475
Score = 233 bits (593), Expect = 4e-59
Identities = 104/193 (53%), Positives = 149/193 (77%)
Frame = +2
Query: 5 LIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMPE 184
+IM+N M+++Y K G V+ ++ VFDQ+ RD +TWTS+++ Y A+ L +A VF MP+
Sbjct: 83 IIMANSMVNAYSKAGRVEDARRVFDQVSVRDKITWTSMISGYCQAKMLDKAVQVFDMMPD 142
Query: 185 RNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQV 364
+ V+WT+LISG+EQN EE+AALELFE+M+A+G P PF++VS L ACA LG RG+++
Sbjct: 143 NDRVAWTALISGHEQNGEEDAALELFERMLAEGVWPTPFSLVSALGACAKLGLVTRGKEL 202
Query: 365 HGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIITGYAQN 544
H +I R+ IG D FN+F+ NAL+DMY KCG+M++A +LFH MP+ D +SWNS++TG++ N
Sbjct: 203 HCYILRQSIGTDPFNIFIYNALLDMYCKCGDMMAAMALFHRMPEKDYISWNSMVTGFSHN 262
Query: 545 GHGKQSLDVFEKM 583
G GKQSLD FE+M
Sbjct: 263 GLGKQSLDTFEEM 275
Score = 70.9 bits (172), Expect = 2e-10
Identities = 39/138 (28%), Positives = 76/138 (55%), Gaps = 5/138 (3%)
Frame = +2
Query: 185 RNTVSWTSLISGYEQNKEEEAALELF-----EQMMAKGFVPNPFTVVSVLSACASLGFTE 349
RN VS+ +++S + +E AL L ++ + G + FTVVS+ +ACA +G
Sbjct: 6 RNLVSYNTVLSSLAHHSRQEEALRLVARLARDRFLGPGLAIDRFTVVSMATACAGIGAER 65
Query: 350 RGRQVHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIIT 529
R++HG + G++ + ++N++++ Y+K G + A +F + D ++W S+I+
Sbjct: 66 PLREMHGAVL--VSGME-MTIIMANSMVNAYSKAGRVEDARRVFDQVSVRDKITWTSMIS 122
Query: 530 GYAQNGHGKQSLDVFEKM 583
GY Q +++ VF+ M
Sbjct: 123 GYCQAKMLDKAVQVFDMM 140
Score = 63.2 bits (152), Expect = 5e-08
Identities = 34/121 (28%), Positives = 56/121 (46%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
N+ + N ++D Y KCGD + A A+F MP
Sbjct: 217 NIFIYNALLDMYCKCGD-------------------------------MMAAMALFHRMP 245
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQ 361
E++ +SW S+++G+ N + +L+ FE+M+ G P T ++VL+AC+ G GR
Sbjct: 246 EKDYISWNSMVTGFSHNGLGKQSLDTFEEMLVAGVQPTHVTFLAVLTACSHSGLVSDGRL 305
Query: 362 V 364
V
Sbjct: 306 V 306
>ref|XP_002452263.1| hypothetical protein SORBIDRAFT_04g022670 [Sorghum bicolor]
gi|241932094|gb|EES05239.1| hypothetical protein
SORBIDRAFT_04g022670 [Sorghum bicolor]
Length = 603
Score = 229 bits (583), Expect = 5e-58
Identities = 102/193 (52%), Positives = 147/193 (76%)
Frame = +2
Query: 5 LIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMPE 184
+IM+N M+++Y K V+ ++H+FDQ+ RD VTWTS+++ Y ++L EA VF MP+
Sbjct: 211 VIMANAMVNAYSKAWRVEEARHLFDQISIRDNVTWTSMISGYCQVKKLDEALQVFDMMPD 270
Query: 185 RNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQV 364
++ V+WT+LISG+EQN EE+ ALELFE+M+A+G P F +VSVL ACA LG RG+++
Sbjct: 271 KDRVAWTALISGHEQNGEEDTALELFERMLAEGVSPTTFALVSVLGACAKLGLVTRGKEL 330
Query: 365 HGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIITGYAQN 544
H I RR IG D FN+F+ NAL+DMY+KCG+M +A ++FH MP+ D +SWNS++TG++ N
Sbjct: 331 HCSILRRSIGSDPFNIFIHNALVDMYSKCGDMTAAMAVFHRMPERDFISWNSMVTGFSHN 390
Query: 545 GHGKQSLDVFEKM 583
G GKQSL +FE+M
Sbjct: 391 GLGKQSLAIFEEM 403
Score = 77.0 bits (188), Expect = 3e-12
Identities = 54/200 (27%), Positives = 102/200 (51%), Gaps = 8/200 (4%)
Frame = +2
Query: 8 IMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSAR-RLQEARAVFFSMPE 184
++SN ++ Y + ++ FD + ++ ++ +L+AA +A +F +MP
Sbjct: 72 LLSNRLVALYSRLPSSAAAVAAFDDLPHKNAHSYNTLLAALLRRPDTFPDALHLFDTMPA 131
Query: 185 --RNTVSWTSLISGYEQNKEEEAALELF-----EQMMAKGFVPNPFTVVSVLSACASLGF 343
RN VS+ +L+S + + AL + ++ + G + FTVVSV +ACA +
Sbjct: 132 DARNLVSYNTLMSSLVHHGRQAEALRVVARLARDRFLGPGLAMDRFTVVSVATACAGIRA 191
Query: 344 TERGRQVHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSI 523
R++HG + G++ V ++NA+++ Y+K + A LF + D V+W S+
Sbjct: 192 ARPLREMHGAVV--VSGME-LTVIMANAMVNAYSKAWRVEEARHLFDQISIRDNVTWTSM 248
Query: 524 ITGYAQNGHGKQSLDVFEKM 583
I+GY Q ++L VF+ M
Sbjct: 249 ISGYCQVKKLDEALQVFDMM 268
Score = 67.4 bits (163), Expect = 3e-09
Identities = 35/121 (28%), Positives = 57/121 (47%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
N+ + N ++D Y KCGD+ + A AVF MP
Sbjct: 345 NIFIHNALVDMYSKCGDMTA-------------------------------AMAVFHRMP 373
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQ 361
ER+ +SW S+++G+ N + +L +FE+M+ G P T ++VL+AC+ G GR
Sbjct: 374 ERDFISWNSMVTGFSHNGLGKQSLAIFEEMLVAGVRPTHVTFLAVLTACSHSGLVSNGRL 433
Query: 362 V 364
+
Sbjct: 434 I 434
>ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 223 bits (569), Expect = 2e-56
Identities = 110/195 (56%), Positives = 142/195 (72%), Gaps = 1/195 (0%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
N+I+ N +ID+YGKCG+ D S +F +M RDVV+WTS+VAAY A RL++A +F M
Sbjct: 182 NIIIGNALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQ 241
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQ 361
E+NTVSWT+LI+G+ QN + AL LFEQM +G P+ FT SVLSACA L RG++
Sbjct: 242 EKNTVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKE 301
Query: 362 VHGFIFRRCIGLDTF-NVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIITGYA 538
+HG I R +D F N+F+ NALIDMY KCG M SA +LF M + DIVSWNS+ITG+A
Sbjct: 302 IHGHIIRSTC-IDYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFA 360
Query: 539 QNGHGKQSLDVFEKM 583
QNGHG++SL VFE+M
Sbjct: 361 QNGHGEESLAVFERM 375
Score = 124 bits (311), Expect = 2e-26
Identities = 75/224 (33%), Positives = 118/224 (52%), Gaps = 33/224 (14%)
Frame = +2
Query: 11 MSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMPERN 190
++N +ID Y KC + S+ VF + ++ +W +++AY+ + EA + MP+ N
Sbjct: 51 LANRLIDFYSKCDSIQSAHKVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPN 110
Query: 191 TVSWTSLISGYEQNKEEEAALELFEQMM--AKGFVPNPFTVVSVLSACASLGFTERGRQV 364
VS+ SLISG + + +L +F+ M+ + + FT+VS++ +CASLG E RQV
Sbjct: 111 LVSYNSLISGLGHHGFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQV 170
Query: 365 HGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNS-------- 520
HG IGL++ N+ + NALID Y KCG + S+F MP+ D+VSW S
Sbjct: 171 HGAAI--IIGLNS-NIIIGNALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQA 227
Query: 521 -----------------------IITGYAQNGHGKQSLDVFEKM 583
+I G+AQNG G ++L +FE+M
Sbjct: 228 SRLEDAHWLFSQMQEKNTVSWTALIAGFAQNGRGDEALHLFEQM 271
Score = 61.2 bits (147), Expect = 2e-07
Identities = 29/84 (34%), Positives = 47/84 (55%)
Frame = +2
Query: 113 SLVAAYTSARRLQEARAVFFSMPERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVP 292
+L+ Y +++ A +F M E++ VSW SLI+G+ QN E +L +FE+M+ P
Sbjct: 323 ALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEADIRP 382
Query: 293 NPFTVVSVLSACASLGFTERGRQV 364
N T + +LSAC G G ++
Sbjct: 383 NHVTFLGLLSACCHTGLVSEGLRI 406
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/91 (29%), Positives = 53/91 (58%)
Frame = +2
Query: 311 SVLSACASLGFTERGRQVHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWM 490
S++S C + + G+ +H + + F F++N LID Y+KC ++ SA +FH +
Sbjct: 19 SLISKCITTRHLKLGKLLHSHFIKTAL---IFTTFLANRLIDFYSKCDSIQSAHKVFHVL 75
Query: 491 PKHDIVSWNSIITGYAQNGHGKQSLDVFEKM 583
P + SWN II+ Y+++G ++ ++ ++M
Sbjct: 76 PVKNTHSWNIIISAYSRSGLFNEAHNLLDQM 106
>ref|XP_002516308.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223544538|gb|EEF46055.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 599
Score = 219 bits (559), Expect = 3e-55
Identities = 107/194 (55%), Positives = 138/194 (71%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
N+I+ N +IDSYGKCG ++S +F +M RDVV+WTS+V AY A R+ +A +F MP
Sbjct: 133 NVIVYNALIDSYGKCGQHNTSYCIFSRMFERDVVSWTSMVDAYARASRMDDAFRLFMEMP 192
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQ 361
+NTVSWTSLI+G+ +N ALELF QM + +P+ FT V+VL ACA L ERG+Q
Sbjct: 193 VKNTVSWTSLIAGFAKNGHSYKALELFLQMQEENVLPSAFTFVTVLGACADLALIERGKQ 252
Query: 362 VHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIITGYAQ 541
+HG I R D FN++V NALIDMY KCG+M S+ SLF M + DIVSWNS+ITG AQ
Sbjct: 253 IHGHIIRSSGRTDLFNMYVYNALIDMYCKCGDMKSSKSLFEGMSEKDIVSWNSLITGLAQ 312
Query: 542 NGHGKQSLDVFEKM 583
NGH ++SLD+F KM
Sbjct: 313 NGHAEESLDLFRKM 326
Score = 90.1 bits (222), Expect = 4e-16
Identities = 61/191 (31%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Frame = +2
Query: 14 SNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMPERNT 193
SN ++D Y K +DS+Q VFD +++ +W +++ Y AR +F MPE N
Sbjct: 45 SNRVMDLYSKFNVIDSAQKVFDDNPIKNIHSWNTMIGGYARVGLFDNARDLFDKMPEPNL 104
Query: 194 VSWTSLISGYEQNKEEEAALELFEQMM-AKGFVPNPFTVVSVLSACASLGFTERGRQVHG 370
+S+ SLISG +L+L Q+ A + F V+ + S G + +
Sbjct: 105 ISYNSLISG---------SLDLLRQVHGAAILIGLEFNVIVYNALIDSYGKCGQHNTSY- 154
Query: 371 FIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIITGYAQNGH 550
IF R D V +++D YA+ M A LF MP + VSW S+I G+A+NGH
Sbjct: 155 CIFSRMFERD---VVSWTSMVDAYARASRMDDAFRLFMEMPVKNTVSWTSLIAGFAKNGH 211
Query: 551 GKQSLDVFEKM 583
++L++F +M
Sbjct: 212 SYKALELFLQM 222
Score = 61.6 bits (148), Expect = 1e-07
Identities = 37/113 (32%), Positives = 53/113 (46%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
N+ + N +ID Y KCGD+ SS+ +F+ M
Sbjct: 268 NMYVYNALIDMYCKCGDMKSSKSLFE-------------------------------GMS 296
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLG 340
E++ VSW SLI+G QN E +L+LF +M+ +PN T VLSAC+ G
Sbjct: 297 EKDIVSWNSLITGLAQNGHAEESLDLFRKMVEGNRLPNHVTFSGVLSACSHTG 349
>gb|EOY03681.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao]
Length = 577
Score = 214 bits (546), Expect = 1e-53
Identities = 106/194 (54%), Positives = 136/194 (70%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
+LI+ N +ID+YGKCG+V+S+ +F +M RDVV+WTS+V AY RL++A VF MP
Sbjct: 175 DLIVYNALIDAYGKCGEVNSAYRIFCRMSERDVVSWTSMVVAYAKVSRLEDASRVFNEMP 234
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQ 361
+NTVSWT LI+G+ QN AL LF QM+ + PN +T V VLSACA L E G+Q
Sbjct: 235 VKNTVSWTGLITGFAQNGRGNEALNLFWQMLEERVQPNAYTYVCVLSACADLARIEIGKQ 294
Query: 362 VHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIITGYAQ 541
+HG I R D+ N FV NALIDMY KCG+M SA LF + + D+VSWNS+ITG+AQ
Sbjct: 295 IHGHIVRVSSRCDSLNEFVFNALIDMYCKCGDMNSAKLLFARISEKDVVSWNSLITGFAQ 354
Query: 542 NGHGKQSLDVFEKM 583
NGHG++SLDVF M
Sbjct: 355 NGHGEESLDVFRMM 368
Score = 120 bits (300), Expect = 3e-25
Identities = 70/196 (35%), Positives = 111/196 (56%), Gaps = 2/196 (1%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
N ++N +I Y K ++ S+Q FD++ ++ +W L+ Y AR +F MP
Sbjct: 41 NPFITNHLIAMYSKFNEIKSAQKAFDELHVKNSHSWNILLFGYLQHGHFDRARNLFDQMP 100
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMM--AKGFVPNPFTVVSVLSACASLGFTERG 355
RN VS+ SLISG+ Q+ + ++ +F++M+ V + +TVVSV+ AC LG +
Sbjct: 101 NRNLVSYNSLISGFSQHGFFKESVNIFKKMLNECDHLVIDRYTVVSVVGACVCLGALKLL 160
Query: 356 RQVHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIITGY 535
QVHGF+ GL+ ++ V NALID Y KCG + SA +F M + D+VSW S++ Y
Sbjct: 161 CQVHGFMI--VFGLE-LDLIVYNALIDAYGKCGEVNSAYRIFCRMSERDVVSWTSMVVAY 217
Query: 536 AQNGHGKQSLDVFEKM 583
A+ + + VF +M
Sbjct: 218 AKVSRLEDASRVFNEM 233
Score = 58.5 bits (140), Expect = 1e-06
Identities = 35/121 (28%), Positives = 53/121 (43%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
N + N +ID Y KCGD++S A+ +F +
Sbjct: 310 NEFVFNALIDMYCKCGDMNS-------------------------------AKLLFARIS 338
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQ 361
E++ VSW SLI+G+ QN E +L++F M+ PN T + LSAC G G +
Sbjct: 339 EKDVVSWNSLITGFAQNGHGEESLDVFRMMIKANTRPNHVTFLGALSACNHTGLVSEGLR 398
Query: 362 V 364
+
Sbjct: 399 I 399
>ref|XP_006347656.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like isoform X1 [Solanum tuberosum]
gi|565361832|ref|XP_006347657.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g13600-like isoform X2 [Solanum tuberosum]
Length = 574
Score = 211 bits (538), Expect = 8e-53
Identities = 104/194 (53%), Positives = 140/194 (72%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
NL++ N +ID+YGKCG + S VF QM DV +WTS++ AY A RL++A ++F +MP
Sbjct: 181 NLVVCNALIDAYGKCGKPEYSYSVFCQMHETDVFSWTSMLVAYIRASRLEDACSLFDNMP 240
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQ 361
RN V+WT+LI G+ QN E E AL +F++M+ +G VP+ T VSVLSACA + E+G+Q
Sbjct: 241 VRNVVAWTALIMGFAQNGEGEKALCIFKEMLEEGIVPSASTYVSVLSACADIPIIEKGKQ 300
Query: 362 VHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIITGYAQ 541
VHG IFR +D NVFV NALIDMY KCG+M+SA +LF + D V+WNSII G+AQ
Sbjct: 301 VHGHIFRYTCLIDLHNVFVVNALIDMYCKCGDMISAMTLFGRLDGKDRVTWNSIIIGFAQ 360
Query: 542 NGHGKQSLDVFEKM 583
NG+G+ SL +F+KM
Sbjct: 361 NGNGEMSLFMFDKM 374
Score = 119 bits (298), Expect = 6e-25
Identities = 73/228 (32%), Positives = 115/228 (50%), Gaps = 34/228 (14%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
N ++N +ID Y KC V+ +Q F+++ ++ +W ++++AY E V MP
Sbjct: 46 NTFLANRLIDMYAKCSSVEYAQQAFNEVSNKNAQSWNTILSAYCKKGLFGETFQVLDVMP 105
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELF---EQMMAKGFVPNPFTVVSVLSACASLGFTER 352
E N VS+ S+IS + A+ F ++ F+ + FTVV V++ACA LG
Sbjct: 106 EPNVVSYNSVISSLTHHGLPGKAMGFFKRTQRQCGDEFLIDEFTVVGVVNACACLGVLRL 165
Query: 353 GRQVHGFIFRRCIGLDTFNVFVSNALIDMYAKCG-------------------------- 454
R++HG F IG+ FN+ V NALID Y KCG
Sbjct: 166 LRELHG--FATVIGV-RFNLVVCNALIDAYGKCGKPEYSYSVFCQMHETDVFSWTSMLVA 222
Query: 455 -----NMVSAASLFHWMPKHDIVSWNSIITGYAQNGHGKQSLDVFEKM 583
+ A SLF MP ++V+W ++I G+AQNG G+++L +F++M
Sbjct: 223 YIRASRLEDACSLFDNMPVRNVVAWTALIMGFAQNGEGEKALCIFKEM 270
Score = 61.6 bits (148), Expect = 1e-07
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 5/190 (2%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
N+ + N +ID Y KCGD+ S+ +F +++ +D VT
Sbjct: 316 NVFVVNALIDMYCKCGDMISAMTLFGRLDGKDRVT------------------------- 350
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERG-R 358
W S+I G+ QN E +L +F++M+ G PN T + VLSAC+ G G
Sbjct: 351 ------WNSIIIGFAQNGNGEMSLFMFDKMIEAGTKPNHVTFLGVLSACSHCGLLSEGFH 404
Query: 359 QVHGFIFRRCI--GLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMP--KHDIVSWNSII 526
+H I LD + + LID+ + + AA L P ++I W +++
Sbjct: 405 YLHSMEREYGIVPQLDHYGI-----LIDLLGRKNRLWEAAELIKGAPWGTNNIGMWGALL 459
Query: 527 TGYAQNGHGK 556
+G+ K
Sbjct: 460 GACRVHGNLK 469
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/93 (30%), Positives = 50/93 (53%)
Frame = +2
Query: 305 VVSVLSACASLGFTERGRQVHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFH 484
+ ++LS C + GR +H + + + FN F++N LIDMYAKC ++ A F+
Sbjct: 15 LANLLSKCIRTNDLKLGRLIHSRLIKTALN---FNTFLANRLIDMYAKCSSVEYAQQAFN 71
Query: 485 WMPKHDIVSWNSIITGYAQNGHGKQSLDVFEKM 583
+ + SWN+I++ Y + G ++ V + M
Sbjct: 72 EVSNKNAQSWNTILSAYCKKGLFGETFQVLDVM 104
>ref|XP_004305694.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Fragaria vesca subsp. vesca]
Length = 589
Score = 207 bits (528), Expect = 1e-51
Identities = 99/194 (51%), Positives = 140/194 (72%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
N++ N +++SYGKCG+ D+S VF +M RDVV+WTS++A+Y SA R+ +A VF MP
Sbjct: 191 NIVACNSLVNSYGKCGEPDTSYSVFSRMLERDVVSWTSMIASYASASRMDDACWVFHGMP 250
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQ 361
+NTVSWT+LISG+ Q+ AL+LF++M+ + P+ T VS+LSACA L ERG+Q
Sbjct: 251 IKNTVSWTALISGFVQSGRGNDALDLFQKMLEERIPPSSVTYVSILSACADLALNERGKQ 310
Query: 362 VHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIITGYAQ 541
+HG I R G N+ + NAL+DMY+KCG+M S +LF + + D+VSWNSIITG+AQ
Sbjct: 311 IHGHIIRSYNGCYLSNLIICNALVDMYSKCGDMRSGKTLFKMICEKDVVSWNSIITGFAQ 370
Query: 542 NGHGKQSLDVFEKM 583
NG G++SL VF++M
Sbjct: 371 NGLGEESLLVFKRM 384
Score = 116 bits (291), Expect = 4e-24
Identities = 69/222 (31%), Positives = 112/222 (50%), Gaps = 33/222 (14%)
Frame = +2
Query: 17 NVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMPERNTV 196
N +ID Y KC + +Q FD + ++ +W ++++ Y+ +AR + +M E N V
Sbjct: 62 NRLIDIYSKCNAIPDAQKAFDDLPTKNTHSWNTMISMYSRNGSFDDARHLLATMTEPNLV 121
Query: 197 SWTSLISGYEQNKEEEAALELFEQMM--AKGFVPNPFTVVSVLSACASLGFTERGRQVHG 370
S+ +LISG ++ + ++ LF++M + + + FT VSV+ CASLG RQVHG
Sbjct: 122 SYNTLISGLARHGYHKESIYLFQRMQQGCECLLLDQFTFVSVVGTCASLGALAMLRQVHG 181
Query: 371 FIFRRCIGLDTFNVFVSNALIDMYAKCG-------------------------------N 457
IGL+ N+ N+L++ Y KCG
Sbjct: 182 VAI--AIGLE-MNIVACNSLVNSYGKCGEPDTSYSVFSRMLERDVVSWTSMIASYASASR 238
Query: 458 MVSAASLFHWMPKHDIVSWNSIITGYAQNGHGKQSLDVFEKM 583
M A +FH MP + VSW ++I+G+ Q+G G +LD+F+KM
Sbjct: 239 MDDACWVFHGMPIKNTVSWTALISGFVQSGRGNDALDLFQKM 280
Score = 60.8 bits (146), Expect = 2e-07
Identities = 45/185 (24%), Positives = 78/185 (42%), Gaps = 2/185 (1%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
NLI+ N ++D Y KCGD+ S + +F +
Sbjct: 326 NLIICNALVDMYSKCGDMRSGKTLFKMI-------------------------------C 354
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQ 361
E++ VSW S+I+G+ QN E +L +F++M+ P T + VLSAC+ G G Q
Sbjct: 355 EKDVVSWNSIITGFAQNGLGEESLLVFKRMVESNMKPTYVTFLLVLSACSHTGLVSEGLQ 414
Query: 362 VHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMP--KHDIVSWNSIITGY 535
+ + + G+ + + +IDM + + A L P I W +++
Sbjct: 415 IL-HLMEKGYGIKPRSSHYA-IVIDMLGRKNKLKEAMELIERAPNTSDHIAMWGALLAAC 472
Query: 536 AQNGH 550
+G+
Sbjct: 473 RVHGN 477
>ref|XP_006581772.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Glycine max]
Length = 581
Score = 207 bits (526), Expect = 2e-51
Identities = 102/194 (52%), Positives = 139/194 (71%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
N+I++N +ID+YGKCG+ + S VF M R+VV+WTS+V AYT A RL EA VF MP
Sbjct: 178 NVILNNALIDAYGKCGEPNLSFSVFCYMPERNVVSWTSMVVAYTRACRLDEACRVFKDMP 237
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQ 361
+NTVSWT+L++G+ +N + A ++F+QM+ +G P+ T VSV+ ACA RG+Q
Sbjct: 238 VKNTVSWTALLTGFVRNGGCDEAFDVFKQMLEEGVRPSAPTFVSVIDACAQEALIGRGKQ 297
Query: 362 VHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIITGYAQ 541
VHG I R + FNV+V NALIDMYAKCG+M SA +LF P D+V+WN++ITG+AQ
Sbjct: 298 VHGQIIRGDKSGNLFNVYVCNALIDMYAKCGDMKSAENLFEMAPMRDVVTWNTLITGFAQ 357
Query: 542 NGHGKQSLDVFEKM 583
NGHG++SL VF +M
Sbjct: 358 NGHGEESLAVFRRM 371
Score = 132 bits (331), Expect = 9e-29
Identities = 71/193 (36%), Positives = 116/193 (60%), Gaps = 2/193 (1%)
Frame = +2
Query: 11 MSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMPERN 190
++N +ID+Y KCG +S+ F + + +W +L++ Y+ EA +F MP+RN
Sbjct: 47 LANGLIDAYSKCGCEESAHKTFGDLPNKTTRSWNTLISFYSKTGFFDEAHNLFDKMPQRN 106
Query: 191 TVSWTSLISGYEQNKEEEAALELFEQMM--AKGFVPNPFTVVSVLSACASLGFTERGRQV 364
VS+ SLISG+ ++ E +++LF M KG V + FT+VSV+ +CA LG + RQV
Sbjct: 107 VVSYNSLISGFTRHGLHEDSVKLFRVMQNSGKGLVLDEFTLVSVVGSCACLGNLQWLRQV 166
Query: 365 HGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIITGYAQN 544
HG +G++ +NV ++NALID Y KCG + S+F +MP+ ++VSW S++ Y +
Sbjct: 167 HGVAV--IVGME-WNVILNNALIDAYGKCGEPNLSFSVFCYMPERNVVSWTSMVVAYTRA 223
Query: 545 GHGKQSLDVFEKM 583
++ VF+ M
Sbjct: 224 CRLDEACRVFKDM 236
Score = 68.6 bits (166), Expect = 1e-09
Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 3/197 (1%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
N+ + N +ID Y KCGD+ S++++F+ RDVVTW +L
Sbjct: 313 NVYVCNALIDMYAKCGDMKSAENLFEMAPMRDVVTWNTL--------------------- 351
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQ 361
I+G+ QN E +L +F +M+ PN T + VLS C G G Q
Sbjct: 352 ----------ITGFAQNGHGEESLAVFRRMIEAKVEPNHVTFLGVLSGCNHAGLDNEGLQ 401
Query: 362 VHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMP---KHDIVSWNSIITG 532
+ + R+ + LID+ + ++ A SL +P K+ I W +++
Sbjct: 402 LVDLMERQYGVKPKAEHYA--LLIDLLGRRNRLMEAMSLIEKVPDGIKNHIAVWGAVLGA 459
Query: 533 YAQNGHGKQSLDVFEKM 583
+G+ + EK+
Sbjct: 460 CRVHGNLDLARKAAEKL 476
>gb|ESW09787.1| hypothetical protein PHAVU_009G155900g [Phaseolus vulgaris]
Length = 582
Score = 202 bits (515), Expect = 4e-50
Identities = 99/194 (51%), Positives = 136/194 (70%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
NLI++N +ID+YGKCG+ D S VF M R+VV+WTS+V AY+ A RL +A VF MP
Sbjct: 178 NLILNNALIDAYGKCGEPDLSCSVFCWMPERNVVSWTSMVVAYSRACRLDDACEVFKDMP 237
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQ 361
+NTVSWT+LI+G+ +N A ++F++M+ +G P+ T VS++ ACA RG+Q
Sbjct: 238 VKNTVSWTALITGFARNGRFGEAFDVFKEMLEEGVRPSAPTFVSIIDACAEEALIGRGKQ 297
Query: 362 VHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIITGYAQ 541
VHG I R I + FNV+V NALIDMY KCG+M SA +LF P D+++WN++ITG+AQ
Sbjct: 298 VHGKIIRGGISGNLFNVYVCNALIDMYGKCGDMKSAENLFQMAPVRDVITWNTLITGFAQ 357
Query: 542 NGHGKQSLDVFEKM 583
NG G+ SL VF +M
Sbjct: 358 NGRGEDSLAVFRRM 371
Score = 130 bits (328), Expect = 2e-28
Identities = 69/193 (35%), Positives = 114/193 (59%), Gaps = 2/193 (1%)
Frame = +2
Query: 11 MSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMPERN 190
++N +ID+Y KCG +S + FD + + +W +L++ Y+ +A +F MP+RN
Sbjct: 47 LANGLIDAYSKCGCEESLRKTFDDLPNKTTRSWNTLISFYSKMGLFDKAHNLFDKMPQRN 106
Query: 191 TVSWTSLISGYEQNKEEEAALELFEQMM--AKGFVPNPFTVVSVLSACASLGFTERGRQV 364
VS+ SLISG+ + E +++LF M V + FTVVSV+ +CA LG + QV
Sbjct: 107 VVSYNSLISGFTRYDRHEDSIKLFRVMQNGRNVLVLDEFTVVSVVGSCACLGNAKWLHQV 166
Query: 365 HGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIITGYAQN 544
HG +G++ +N+ ++NALID Y KCG + S+F WMP+ ++VSW S++ Y++
Sbjct: 167 HGVAV--IVGME-WNLILNNALIDAYGKCGEPDLSCSVFCWMPERNVVSWTSMVVAYSRA 223
Query: 545 GHGKQSLDVFEKM 583
+ +VF+ M
Sbjct: 224 CRLDDACEVFKDM 236
Score = 64.7 bits (156), Expect = 2e-08
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 3/178 (1%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
N+ + N +ID YGKCGD+ S++++F RDV+TW +L+
Sbjct: 313 NVYVCNALIDMYGKCGDMKSAENLFQMAPVRDVITWNTLI-------------------- 352
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQ 361
+G+ QN E +L +F +M+ PN T + VLS C+ G G +
Sbjct: 353 -----------TGFAQNGRGEDSLAVFRRMVEAKVEPNHVTFLGVLSGCSHAGLDNEGLE 401
Query: 362 VHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPK---HDIVSWNSII 526
+ + R+ + + LID+ + + A SL +P + I W +I+
Sbjct: 402 LVDLMERKYGVKPKADHYA--LLIDLLGRKNRLKEAMSLTEKVPNEIMNHIAVWGAIL 457
>ref|XP_004143404.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
gi|449526377|ref|XP_004170190.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 577
Score = 202 bits (515), Expect = 4e-50
Identities = 97/194 (50%), Positives = 136/194 (70%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
N+I+ N ++D+YGKCGD D+S +F +M+ RDVVTWTS+V AY RL +A VF MP
Sbjct: 179 NMIVCNAIVDAYGKCGDPDASYSIFSRMKERDVVTWTSMVVAYNQTSRLDDAFRVFSCMP 238
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQ 361
+N +WT+LI+ +NK AL+LF+QM+ + PN FT V VLSACA L +G++
Sbjct: 239 VKNVHTWTALINALVKNKYSNEALDLFQQMLEEKTSPNAFTFVGVLSACADLALIAKGKE 298
Query: 362 VHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIITGYAQ 541
+HG I RR L+ NV+V NALID+Y+K G++ SA LF+ + + D+VSWNS+ITG+AQ
Sbjct: 299 IHGLIIRRSSELNFPNVYVCNALIDLYSKSGDVKSARMLFNLILEKDVVSWNSLITGFAQ 358
Query: 542 NGHGKQSLDVFEKM 583
NG G+++L F KM
Sbjct: 359 NGLGREALLAFRKM 372
Score = 124 bits (312), Expect = 1e-26
Identities = 68/196 (34%), Positives = 110/196 (56%), Gaps = 2/196 (1%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
+L ++N +ID Y KC ++++Q FD + R++ +W +++A+Y+ A +AR VF MP
Sbjct: 45 DLFLANRLIDMYSKCNSMENAQKAFDDLPIRNIHSWNTILASYSRAGFFSQARKVFDEMP 104
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKG--FVPNPFTVVSVLSACASLGFTERG 355
N VS+ +LIS + + ++ +F QM + T+VS+ CA LG E
Sbjct: 105 HPNIVSYNTLISSFTHHGLYVESMNIFRQMQQDFDLLALDEITLVSIAGTCACLGALEFL 164
Query: 356 RQVHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIITGY 535
RQVHG IGL+ FN+ V NA++D Y KCG+ ++ S+F M + D+V+W S++ Y
Sbjct: 165 RQVHGAAI--VIGLE-FNMIVCNAIVDAYGKCGDPDASYSIFSRMKERDVVTWTSMVVAY 221
Query: 536 AQNGHGKQSLDVFEKM 583
Q + VF M
Sbjct: 222 NQTSRLDDAFRVFSCM 237
Score = 59.7 bits (143), Expect = 5e-07
Identities = 29/90 (32%), Positives = 51/90 (56%)
Frame = +2
Query: 314 VLSACASLGFTERGRQVHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMP 493
+ S C G +H + + + +F++F++N LIDMY+KC +M +A F +P
Sbjct: 17 LFSKCIQHKHLRVGMSLHSHLIKTAL---SFDLFLANRLIDMYSKCNSMENAQKAFDDLP 73
Query: 494 KHDIVSWNSIITGYAQNGHGKQSLDVFEKM 583
+I SWN+I+ Y++ G Q+ VF++M
Sbjct: 74 IRNIHSWNTILASYSRAGFFSQARKVFDEM 103
Score = 59.3 bits (142), Expect = 7e-07
Identities = 31/87 (35%), Positives = 49/87 (56%)
Frame = +2
Query: 95 DVVTWTSLVAAYTSARRLQEARAVFFSMPERNTVSWTSLISGYEQNKEEEAALELFEQMM 274
+V +L+ Y+ + ++ AR +F + E++ VSW SLI+G+ QN AL F +M
Sbjct: 314 NVYVCNALIDLYSKSGDVKSARMLFNLILEKDVVSWNSLITGFAQNGLGREALLAFRKMT 373
Query: 275 AKGFVPNPFTVVSVLSACASLGFTERG 355
G PN T ++VLSAC+ G + G
Sbjct: 374 EVGIRPNKVTFLAVLSACSHTGLSSEG 400
>ref|XP_004502948.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cicer arietinum]
Length = 599
Score = 196 bits (499), Expect = 3e-48
Identities = 97/194 (50%), Positives = 135/194 (69%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
N+I++N +I++YGKCG+ D+S +F M +DVV+WTS+V AYT A R+ +A +F MP
Sbjct: 194 NVILNNALINAYGKCGETDASNCLFRSMLIKDVVSWTSMVVAYTQASRIDDACRLFHDMP 253
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQ 361
+N+VSWT+LISG+ +N AL +F QM+ + +P+ T VSVL ACAS +G+Q
Sbjct: 254 VKNSVSWTALISGFAKNGRCYEALNVFHQMLEEKVMPSAQTFVSVLDACASEALIGKGKQ 313
Query: 362 VHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIITGYAQ 541
VH I R + FNV+V NALIDMY KCG+M SA +LF + D+VSWN++I G+AQ
Sbjct: 314 VHCQIIRGSNSGNLFNVYVCNALIDMYGKCGDMKSAENLFDIIHVKDVVSWNTLINGFAQ 373
Query: 542 NGHGKQSLDVFEKM 583
NGHG+ SL VF +M
Sbjct: 374 NGHGEDSLAVFSRM 387
Score = 117 bits (292), Expect = 3e-24
Identities = 73/227 (32%), Positives = 119/227 (52%), Gaps = 33/227 (14%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
++ ++N +ID Y KCG ++S+ FD + + +W +L++ Y+ A +F MP
Sbjct: 60 DVFLANKLIDVYSKCGCIESTHKAFDDIPNKTTRSWNTLLSFYSKTGSFTHAYKLFDKMP 119
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMM--AKGFVPNPFTVVSVLSACASLGFTERG 355
+RN VS+ SLISG+ ++ + A+ LF M G V + FT+VS++ C+ L +
Sbjct: 120 QRNLVSYNSLISGFTRHGFHKEAVNLFHVMQNSCGGLVLDEFTLVSIVRNCSCLCNLKML 179
Query: 356 RQVHGFIFRRCIGLDTFNVFVSNALIDMYAKCG---------------------NMV--- 463
R+VHG +G + NV ++NALI+ Y KCG +MV
Sbjct: 180 REVHGVAV--IVGFHS-NVILNNALINAYGKCGETDASNCLFRSMLIKDVVSWTSMVVAY 236
Query: 464 -------SAASLFHWMPKHDIVSWNSIITGYAQNGHGKQSLDVFEKM 583
A LFH MP + VSW ++I+G+A+NG ++L+VF +M
Sbjct: 237 TQASRIDDACRLFHDMPVKNSVSWTALISGFAKNGRCYEALNVFHQM 283
Score = 68.6 bits (166), Expect = 1e-09
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 4/187 (2%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
N+ + N +ID YGKCGD+ S++++FD + +DVV
Sbjct: 329 NVYVCNALIDMYGKCGDMKSAENLFDIIHVKDVV-------------------------- 362
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQ 361
SW +LI+G+ QN E +L +F +M+ PN T + VLSAC+ G G +
Sbjct: 363 -----SWNTLINGFAQNGHGEDSLAVFSRMIEANIEPNHVTFLGVLSACSHAGLINEGLK 417
Query: 362 VHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVS----WNSIIT 529
+ + R + + +ID+ + + A L +P + I++ W +++
Sbjct: 418 LLNLMEREYKVKPKSDHYA--VIIDLLGRKNKLKEALCLIEKVPNNGIINHIAMWGALLG 475
Query: 530 GYAQNGH 550
+G+
Sbjct: 476 ACRVHGN 482
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/91 (29%), Positives = 52/91 (57%)
Frame = +2
Query: 311 SVLSACASLGFTERGRQVHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWM 490
S++S C + + G+ +H + + + F+VF++N LID+Y+KCG + S F +
Sbjct: 31 SLISKCVTTKSLKLGKALHSHLIKTAL---FFDVFLANKLIDVYSKCGCIESTHKAFDDI 87
Query: 491 PKHDIVSWNSIITGYAQNGHGKQSLDVFEKM 583
P SWN++++ Y++ G + +F+KM
Sbjct: 88 PNKTTRSWNTLLSFYSKTGSFTHAYKLFDKM 118
>ref|XP_003602633.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491681|gb|AES72884.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 647
Score = 194 bits (493), Expect = 1e-47
Identities = 101/195 (51%), Positives = 134/195 (68%), Gaps = 1/195 (0%)
Frame = +2
Query: 2 NLIMSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMP 181
NLI++N +ID+YGKCG+ +SS +F M +D V+WTS+V YT A R+ +A VF MP
Sbjct: 246 NLILNNALIDAYGKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMP 305
Query: 182 ERNTVSWTSLISGYEQNKEEEAALELFEQMMAKGFVPNPFTVVSVLSACASLGFTERGRQ 361
+ TVSW +LISG+ +N ALE+F QM+ +G +P T VSVL ACAS RG+Q
Sbjct: 306 VKYTVSWAALISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQ 365
Query: 362 VHGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWM-PKHDIVSWNSIITGYA 538
VH I R + FNV+V NAL+DMYAKCG+M SA +LF M D+VSWN++ITG+A
Sbjct: 366 VHCQIIRGRSSDNLFNVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFA 425
Query: 539 QNGHGKQSLDVFEKM 583
QNG G+ SL VF++M
Sbjct: 426 QNGRGEDSLAVFDRM 440
Score = 118 bits (295), Expect = 1e-24
Identities = 68/193 (35%), Positives = 107/193 (55%), Gaps = 2/193 (1%)
Frame = +2
Query: 11 MSNVMIDSYGKCGDVDSSQHVFDQMERRDVVTWTSLVAAYTSARRLQEARAVFFSMPERN 190
++N +ID Y KCG +S FD + + TW +L++ Y+ +A +F MP+RN
Sbjct: 115 LANGLIDLYSKCGCKESIHKAFDDLPNKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRN 174
Query: 191 TVSWTSLISGYEQNKEEEAALELFEQMM--AKGFVPNPFTVVSVLSACASLGFTERGRQV 364
VS+ SLISG +++ + A++ F +M G + + FT+VS++S C+ L + RQV
Sbjct: 175 LVSYNSLISGLTRHEFHKEAVKFFREMQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQV 234
Query: 365 HGFIFRRCIGLDTFNVFVSNALIDMYAKCGNMVSAASLFHWMPKHDIVSWNSIITGYAQN 544
HG +G T N+ ++NALID Y KCG S+ LF M + D VSW S++ Y +
Sbjct: 235 HG--VATIVGFRT-NLILNNALIDAYGKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRA 291
Query: 545 GHGKQSLDVFEKM 583
+ VF +M
Sbjct: 292 SRIDDACKVFNEM 304