BLASTX nr result

ID: Zingiber23_contig00051679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00051679
         (208 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004973577.1| PREDICTED: RING-H2 finger protein ATL13-like...    71   1e-10
ref|XP_002444436.1| hypothetical protein SORBIDRAFT_07g021910 [S...    71   1e-10
ref|NP_001061924.1| Os08g0445000 [Oryza sativa Japonica Group] g...    69   5e-10
gb|EAZ07160.1| hypothetical protein OsI_29407 [Oryza sativa Indi...    69   5e-10
gb|ACG31172.1| RING-H2 finger protein ATL2C [Zea mays]                 63   5e-08
ref|NP_001140996.1| uncharacterized protein LOC100273075 [Zea ma...    63   5e-08
ref|XP_002533989.1| ring finger protein, putative [Ricinus commu...    55   1e-05

>ref|XP_004973577.1| PREDICTED: RING-H2 finger protein ATL13-like [Setaria italica]
          Length = 487

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 30/50 (60%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
 Frame = -2

Query: 207 YEYVMEDDTMLWVPIEPP--KKPYVKKSGHRIAMSECDCHSRREGFRGLD 64
           YEYVM++ ++L V ++PP  K+P  +  GHR+AMSECDCHS+REGFRG D
Sbjct: 299 YEYVMDESSLLRVAVKPPEKKRPATRMPGHRVAMSECDCHSKREGFRGFD 348


>ref|XP_002444436.1| hypothetical protein SORBIDRAFT_07g021910 [Sorghum bicolor]
           gi|241940786|gb|EES13931.1| hypothetical protein
           SORBIDRAFT_07g021910 [Sorghum bicolor]
          Length = 500

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 30/50 (60%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
 Frame = -2

Query: 207 YEYVMEDDTMLWVPIEPP--KKPYVKKSGHRIAMSECDCHSRREGFRGLD 64
           YEYVM++ ++L V ++PP  K+P  +  GHR+AMSECDCHS+REGFRG D
Sbjct: 306 YEYVMDESSLLRVAVKPPEKKRPATRMPGHRVAMSECDCHSKREGFRGFD 355


>ref|NP_001061924.1| Os08g0445000 [Oryza sativa Japonica Group]
           gi|42407444|dbj|BAD10051.1| putative RING finger 1
           [Oryza sativa Japonica Group]
           gi|42408331|dbj|BAD09484.1| putative RING finger 1
           [Oryza sativa Japonica Group]
           gi|113623893|dbj|BAF23838.1| Os08g0445000 [Oryza sativa
           Japonica Group] gi|125603581|gb|EAZ42906.1| hypothetical
           protein OsJ_27500 [Oryza sativa Japonica Group]
           gi|215741364|dbj|BAG97859.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 501

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 30/50 (60%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
 Frame = -2

Query: 207 YEYVMEDDTMLWVPIEPP--KKPYVKKSGHRIAMSECDCHSRREGFRGLD 64
           YEYVM++ ++L V ++PP  K+P  +  GHR+AMSECDCHS+RE FRGLD
Sbjct: 305 YEYVMDERSLLRVAVKPPAKKRPTTQMPGHRVAMSECDCHSKRESFRGLD 354


>gb|EAZ07160.1| hypothetical protein OsI_29407 [Oryza sativa Indica Group]
          Length = 500

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 30/50 (60%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
 Frame = -2

Query: 207 YEYVMEDDTMLWVPIEPP--KKPYVKKSGHRIAMSECDCHSRREGFRGLD 64
           YEYVM++ ++L V ++PP  K+P  +  GHR+AMSECDCHS+RE FRGLD
Sbjct: 304 YEYVMDERSLLRVAVKPPTKKRPTTQMPGHRVAMSECDCHSKRESFRGLD 353


>gb|ACG31172.1| RING-H2 finger protein ATL2C [Zea mays]
          Length = 481

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 4/52 (7%)
 Frame = -2

Query: 207 YEYVMEDDTMLWVPIEPP--KKPYVKKS--GHRIAMSECDCHSRREGFRGLD 64
           YEYVM++ ++L V ++ P  K+P  +    GHR+AMSECDCHS+REGFRG D
Sbjct: 299 YEYVMDESSLLRVAVKLPEKKRPATRSRMPGHRVAMSECDCHSKREGFRGFD 350


>ref|NP_001140996.1| uncharacterized protein LOC100273075 [Zea mays]
           gi|194702090|gb|ACF85129.1| unknown [Zea mays]
          Length = 483

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 4/52 (7%)
 Frame = -2

Query: 207 YEYVMEDDTMLWVPIEPP--KKPYVKKS--GHRIAMSECDCHSRREGFRGLD 64
           YEYVM++ ++L V ++ P  K+P  +    GHR+AMSECDCHS+REGFRG D
Sbjct: 301 YEYVMDESSLLRVAVKLPEKKRPATRSRMPGHRVAMSECDCHSKREGFRGFD 352


>ref|XP_002533989.1| ring finger protein, putative [Ricinus communis]
           gi|223526024|gb|EEF28396.1| ring finger protein,
           putative [Ricinus communis]
          Length = 495

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/70 (48%), Positives = 39/70 (55%), Gaps = 9/70 (12%)
 Frame = -2

Query: 207 YEYVMEDDTMLWVPIEPPKKPYVKKS-------GHRIAMSECDCHSRREGFRGLDRAIAP 49
           +EYVM+D+T L V I  P K    K        GHR AMSECDC SRRE F GL   I  
Sbjct: 300 FEYVMDDNTSLQVAIRTPMKKQSSKKPSIPLTPGHRPAMSECDCESRRE-FNGLFEGIRS 358

Query: 48  QD--GNVSAI 25
            +  GNVS +
Sbjct: 359 MEANGNVSGV 368