BLASTX nr result
ID: Zingiber23_contig00051618
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00051618
(313 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q67W65.1|TAF1_ORYSJ RecName: Full=Transcription initiation fa... 80 4e-13
gb|EEE66112.1| hypothetical protein OsJ_22148 [Oryza sativa Japo... 80 4e-13
gb|EEC81073.1| hypothetical protein OsI_23891 [Oryza sativa Indi... 80 4e-13
ref|XP_003560349.1| PREDICTED: transcription initiation factor T... 79 6e-13
ref|XP_006657187.1| PREDICTED: transcription initiation factor T... 79 8e-13
gb|EMT07791.1| hypothetical protein F775_01982 [Aegilops tauschii] 78 1e-12
gb|EMS57087.1| Transcription initiation factor TFIID subunit 1 [... 78 1e-12
gb|EMT07789.1| hypothetical protein F775_06671 [Aegilops tauschii] 77 2e-12
gb|EMS63019.1| Transcription initiation factor TFIID subunit 1 [... 77 2e-12
ref|XP_006366188.1| PREDICTED: transcription initiation factor T... 77 3e-12
ref|XP_006366187.1| PREDICTED: transcription initiation factor T... 77 3e-12
ref|XP_006366186.1| PREDICTED: transcription initiation factor T... 77 3e-12
gb|AFW87279.1| hypothetical protein ZEAMMB73_604430 [Zea mays] 77 3e-12
ref|XP_002438744.1| hypothetical protein SORBIDRAFT_10g025390 [S... 77 3e-12
ref|XP_004242685.1| PREDICTED: transcription initiation factor T... 73 3e-11
gb|EMJ26687.1| hypothetical protein PRUPE_ppa000092mg [Prunus pe... 73 4e-11
emb|CBI21835.3| unnamed protein product [Vitis vinifera] 72 1e-10
ref|XP_004288581.1| PREDICTED: transcription initiation factor T... 71 2e-10
ref|XP_002273712.2| PREDICTED: transcription initiation factor T... 71 2e-10
gb|EXB57308.1| Transcription initiation factor TFIID subunit 1-A... 70 2e-10
>sp|Q67W65.1|TAF1_ORYSJ RecName: Full=Transcription initiation factor TFIID subunit 1;
AltName: Full=TAFII250 gi|51535532|dbj|BAD37451.1|
putative HAC13 protein [Oryza sativa Japonica Group]
gi|51535630|dbj|BAD37604.1| putative HAC13 protein
[Oryza sativa Japonica Group]
Length = 1810
Score = 79.7 bits (195), Expect = 4e-13
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = -2
Query: 162 LNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLPDDQMLFEILD 19
LNKLS LNKE LE SWLD+I+WD E++PKPKLI DL DD MLFEILD
Sbjct: 465 LNKLSLLNKELLEGSWLDNIVWDPSEDVPKPKLIFDLKDDHMLFEILD 512
>gb|EEE66112.1| hypothetical protein OsJ_22148 [Oryza sativa Japonica Group]
Length = 1804
Score = 79.7 bits (195), Expect = 4e-13
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = -2
Query: 162 LNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLPDDQMLFEILD 19
LNKLS LNKE LE SWLD+I+WD E++PKPKLI DL DD MLFEILD
Sbjct: 465 LNKLSLLNKELLEGSWLDNIVWDPSEDVPKPKLIFDLKDDHMLFEILD 512
>gb|EEC81073.1| hypothetical protein OsI_23891 [Oryza sativa Indica Group]
Length = 1773
Score = 79.7 bits (195), Expect = 4e-13
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = -2
Query: 162 LNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLPDDQMLFEILD 19
LNKLS LNKE LE SWLD+I+WD E++PKPKLI DL DD MLFEILD
Sbjct: 465 LNKLSLLNKELLEGSWLDNIVWDPSEDVPKPKLIFDLKDDHMLFEILD 512
>ref|XP_003560349.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
[Brachypodium distachyon]
Length = 1830
Score = 79.0 bits (193), Expect = 6e-13
Identities = 38/70 (54%), Positives = 46/70 (65%)
Frame = -2
Query: 228 SSTESVTDKRSEAVSKDGVLGRLNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLP 49
++ + + +K + LN LS LNKE LE SWLD+IIWD E+ PKPKLI DL
Sbjct: 469 NNLDEIEPNNINGTAKINTMKCLNNLSLLNKELLEGSWLDNIIWDPTEDTPKPKLIFDLK 528
Query: 48 DDQMLFEILD 19
DDQMLFEILD
Sbjct: 529 DDQMLFEILD 538
>ref|XP_006657187.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
[Oryza brachyantha]
Length = 1813
Score = 78.6 bits (192), Expect = 8e-13
Identities = 37/55 (67%), Positives = 41/55 (74%)
Frame = -2
Query: 183 KDGVLGRLNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLPDDQMLFEILD 19
K + LNKLS LNKE LE SWLD+I+WD E+ PKPKLI DL DD MLFEILD
Sbjct: 460 KIDTMRHLNKLSLLNKELLEGSWLDNIVWDPSEDAPKPKLIFDLKDDHMLFEILD 514
>gb|EMT07791.1| hypothetical protein F775_01982 [Aegilops tauschii]
Length = 1881
Score = 77.8 bits (190), Expect = 1e-12
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = -2
Query: 162 LNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLPDDQMLFEILD 19
L+ LS LNKE LE SWLD++IWD E+ PKPKLILDL DDQMLFEILD
Sbjct: 472 LSNLSLLNKELLEGSWLDNVIWDPSEDTPKPKLILDLKDDQMLFEILD 519
>gb|EMS57087.1| Transcription initiation factor TFIID subunit 1 [Triticum urartu]
Length = 2008
Score = 77.8 bits (190), Expect = 1e-12
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = -2
Query: 162 LNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLPDDQMLFEILD 19
L+ LS LNKE LE SWLD++IWD E+ PKPKLILDL DDQMLFEILD
Sbjct: 472 LSNLSLLNKELLEGSWLDNVIWDPSEDTPKPKLILDLKDDQMLFEILD 519
>gb|EMT07789.1| hypothetical protein F775_06671 [Aegilops tauschii]
Length = 615
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = -2
Query: 162 LNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLPDDQMLFEILD 19
L+ LS LNKE LE SWLD+IIWD E+ PKPKLI+DL DDQMLFEILD
Sbjct: 465 LSNLSLLNKELLEGSWLDNIIWDHSEDAPKPKLIMDLKDDQMLFEILD 512
>gb|EMS63019.1| Transcription initiation factor TFIID subunit 1 [Triticum urartu]
Length = 1743
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = -2
Query: 162 LNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLPDDQMLFEILD 19
L+ LS LNKE LE SWLD+IIWD E+ PKPKLI+DL DDQMLFEILD
Sbjct: 477 LSNLSLLNKELLEGSWLDNIIWDHSEDAPKPKLIMDLKDDQMLFEILD 524
>ref|XP_006366188.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
isoform X3 [Solanum tuberosum]
Length = 1856
Score = 76.6 bits (187), Expect = 3e-12
Identities = 37/80 (46%), Positives = 54/80 (67%)
Frame = -2
Query: 258 SELNSKRVLLSSTESVTDKRSEAVSKDGVLGRLNKLSSLNKEFLESSWLDHIIWDSDENI 79
S LN+ R ST++ D+ ++ + L R +KL+ N++ LE SW+D+IIW+ D+
Sbjct: 461 SRLNADRQ--RSTDTPKDEDTDEILSSDALRRFSKLTLQNRDILEESWVDNIIWEPDQPF 518
Query: 78 PKPKLILDLPDDQMLFEILD 19
PKPKLI DL D+QMLFE+LD
Sbjct: 519 PKPKLIYDLQDEQMLFEVLD 538
>ref|XP_006366187.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
isoform X2 [Solanum tuberosum]
Length = 1857
Score = 76.6 bits (187), Expect = 3e-12
Identities = 37/80 (46%), Positives = 54/80 (67%)
Frame = -2
Query: 258 SELNSKRVLLSSTESVTDKRSEAVSKDGVLGRLNKLSSLNKEFLESSWLDHIIWDSDENI 79
S LN+ R ST++ D+ ++ + L R +KL+ N++ LE SW+D+IIW+ D+
Sbjct: 461 SRLNADRQ--RSTDTPKDEDTDEILSSDALRRFSKLTLQNRDILEESWVDNIIWEPDQPF 518
Query: 78 PKPKLILDLPDDQMLFEILD 19
PKPKLI DL D+QMLFE+LD
Sbjct: 519 PKPKLIYDLQDEQMLFEVLD 538
>ref|XP_006366186.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
isoform X1 [Solanum tuberosum]
Length = 1858
Score = 76.6 bits (187), Expect = 3e-12
Identities = 37/80 (46%), Positives = 54/80 (67%)
Frame = -2
Query: 258 SELNSKRVLLSSTESVTDKRSEAVSKDGVLGRLNKLSSLNKEFLESSWLDHIIWDSDENI 79
S LN+ R ST++ D+ ++ + L R +KL+ N++ LE SW+D+IIW+ D+
Sbjct: 461 SRLNADRQ--RSTDTPKDEDTDEILSSDALRRFSKLTLQNRDILEESWVDNIIWEPDQPF 518
Query: 78 PKPKLILDLPDDQMLFEILD 19
PKPKLI DL D+QMLFE+LD
Sbjct: 519 PKPKLIYDLQDEQMLFEVLD 538
>gb|AFW87279.1| hypothetical protein ZEAMMB73_604430 [Zea mays]
Length = 659
Score = 76.6 bits (187), Expect = 3e-12
Identities = 39/59 (66%), Positives = 45/59 (76%)
Frame = -2
Query: 195 EAVSKDGVLGRLNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLPDDQMLFEILD 19
+AV D ++ RLN LS LN+E LE SWLD+IIWD +E PKPKLI DL DD MLFEILD
Sbjct: 508 DAVKIDTMV-RLNNLSVLNRELLEGSWLDNIIWDPNEVTPKPKLIFDLKDDHMLFEILD 565
>ref|XP_002438744.1| hypothetical protein SORBIDRAFT_10g025390 [Sorghum bicolor]
gi|241916967|gb|EER90111.1| hypothetical protein
SORBIDRAFT_10g025390 [Sorghum bicolor]
Length = 1804
Score = 76.6 bits (187), Expect = 3e-12
Identities = 39/59 (66%), Positives = 44/59 (74%)
Frame = -2
Query: 195 EAVSKDGVLGRLNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLPDDQMLFEILD 19
+AV D + RLN LS LN+E LE SWLD+IIWD +E PKPKLI DL DD MLFEILD
Sbjct: 458 DAVKIDTTM-RLNNLSLLNRELLEGSWLDNIIWDPNEVTPKPKLIFDLKDDHMLFEILD 515
>ref|XP_004242685.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
[Solanum lycopersicum]
Length = 1856
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/79 (45%), Positives = 51/79 (64%)
Frame = -2
Query: 258 SELNSKRVLLSSTESVTDKRSEAVSKDGVLGRLNKLSSLNKEFLESSWLDHIIWDSDENI 79
S LNS + ST++ D ++ + L R KL+ N++ LE SW+D+IIW+ D+
Sbjct: 461 SRLNSDKQ--KSTDTPKDGDTDEILSSDALKRFTKLTLQNRDILEESWVDNIIWEPDQPF 518
Query: 78 PKPKLILDLPDDQMLFEIL 22
PKPKLI DL D+QMLFE+L
Sbjct: 519 PKPKLIYDLQDEQMLFEVL 537
>gb|EMJ26687.1| hypothetical protein PRUPE_ppa000092mg [Prunus persica]
Length = 1849
Score = 72.8 bits (177), Expect = 4e-11
Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Frame = -2
Query: 288 DVTCLPQSNGS------ELNSKRVLLSSTESVTDKRSEAVSKDGVLGRLNKLSSLNKEFL 127
++ CLP S L S+ + T+ + E + + + +KL+S N++ L
Sbjct: 380 ELLCLPVSESRCHPQLLRLESRFEVDDHTDGTMESVGEKLHQSDAVREFSKLTSQNRDML 439
Query: 126 ESSWLDHIIWDSDENIPKPKLILDLPDDQMLFEILDYTVSD 4
+ SWLD IIWD D KPKLILDL D+QMLFEILD S+
Sbjct: 440 KGSWLDQIIWDPDMPTGKPKLILDLQDEQMLFEILDNKESE 480
>emb|CBI21835.3| unnamed protein product [Vitis vinifera]
Length = 1798
Score = 71.6 bits (174), Expect = 1e-10
Identities = 35/78 (44%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Frame = -2
Query: 240 RVLLSSTESVTDKRSEAVSKDG----VLGRLNKLSSLNKEFLESSWLDHIIWDSDENIPK 73
+++ ++ V+D +E+ G + R NKL+ N++ LE SW+D IIW+ + I K
Sbjct: 346 KIIWDNSPEVSDNSAESCEISGPDSEAIRRFNKLTLQNRDMLEGSWVDRIIWEPHKPISK 405
Query: 72 PKLILDLPDDQMLFEILD 19
PKLILDL D+QMLFEILD
Sbjct: 406 PKLILDLQDEQMLFEILD 423
>ref|XP_004288581.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
[Fragaria vesca subsp. vesca]
Length = 1851
Score = 70.9 bits (172), Expect = 2e-10
Identities = 41/93 (44%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Frame = -2
Query: 279 CLPQSNGS------ELNSKRVLLSSTESVTDKRSEAVSKDGVLGRLNKLSSLNKEFLESS 118
CL S+G L S+ + + D E + K + +K SS N++ LE S
Sbjct: 405 CLNLSDGRYHPQLLRLESRCEVEDHADGRVDNSGEKLHKGHTVRHFSKHSSKNRDILEGS 464
Query: 117 WLDHIIWDSDENIPKPKLILDLPDDQMLFEILD 19
WLD IIWD D I KPKLILDL D+QMLFEI D
Sbjct: 465 WLDQIIWDPDIPIRKPKLILDLEDEQMLFEISD 497
>ref|XP_002273712.2| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
[Vitis vinifera]
Length = 2068
Score = 70.9 bits (172), Expect = 2e-10
Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Frame = -2
Query: 249 NSKRVLLSSTESVTDKR-SEAVSKDGVLGRLNKLSSLNKEFLESSWLDHIIWDSDENIPK 73
NS + + +++ D R SEA+ R NKL+ N++ LE SW+D IIW+ + I K
Sbjct: 622 NSSQSAVRKEDAIEDPRGSEAIR------RFNKLTLQNRDMLEGSWVDRIIWEPHKPISK 675
Query: 72 PKLILDLPDDQMLFEILD 19
PKLILDL D+QMLFEILD
Sbjct: 676 PKLILDLQDEQMLFEILD 693
>gb|EXB57308.1| Transcription initiation factor TFIID subunit 1-A [Morus notabilis]
Length = 1993
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -2
Query: 210 TDKRSEA-VSKDGVLGRLNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLPDDQML 34
TDK +E + + + NKL S N++ LE SWLD IIW+ D ++ KPKLI DL D+QML
Sbjct: 546 TDKVNEKQLHQTNAVRNFNKLISQNRDMLEGSWLDAIIWEQDTHVRKPKLIFDLQDEQML 605
Query: 33 FEILD 19
FEILD
Sbjct: 606 FEILD 610