BLASTX nr result
ID: Zingiber23_contig00050996
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00050996
(475 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
gb|EMJ05696.1| hypothetical protein PRUPE_ppa019362mg [Prunus pe... 79 5e-13
gb|EOX91375.1| Pentatricopeptide repeat-containing protein, puta... 77 2e-12
ref|XP_002523554.1| pentatricopeptide repeat-containing protein,... 75 7e-12
gb|ESW27929.1| hypothetical protein PHAVU_003G244800g [Phaseolus... 70 3e-10
ref|XP_003551036.1| PREDICTED: pentatricopeptide repeat-containi... 69 5e-10
ref|XP_006360219.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
ref|XP_004233437.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-08
gb|EXB65067.1| hypothetical protein L484_004243 [Morus notabilis] 63 5e-08
ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 59 5e-07
gb|EXC12608.1| hypothetical protein L484_012985 [Morus notabilis] 58 2e-06
gb|EMT33444.1| hypothetical protein F775_20071 [Aegilops tauschii] 57 2e-06
ref|XP_003528138.1| PREDICTED: putative pentatricopeptide repeat... 57 2e-06
ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat... 57 3e-06
ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Sela... 57 3e-06
ref|XP_006465305.1| PREDICTED: putative pentatricopeptide repeat... 57 3e-06
ref|XP_006827313.1| hypothetical protein AMTR_s00010p00266520 [A... 56 4e-06
emb|CBI35295.3| unnamed protein product [Vitis vinifera] 56 4e-06
ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containi... 56 4e-06
emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera] 56 4e-06
>ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Vitis vinifera]
Length = 634
Score = 81.6 bits (200), Expect = 1e-13
Identities = 43/98 (43%), Positives = 54/98 (55%)
Frame = +2
Query: 77 TKSLPQIAQIHQHLAACGLYADPSVATKLLQLYADAGDLPSALRLFAVIPSPSVFAWTPI 256
+K+L Q Q+HQH+ CGL P + TKL+Q+YAD GDL SA LF + P+VFAWT I
Sbjct: 36 SKALHQGKQLHQHIILCGLDHHPFMLTKLVQMYADCGDLGSAQALFDKLSQPNVFAWTAI 95
Query: 257 LAXXXXXXXXXXXXXXXXXMRFAAVAPDGYVFPLVLRS 370
L M+ V PD YVFP V R+
Sbjct: 96 LGFYSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRA 133
>gb|EMJ05696.1| hypothetical protein PRUPE_ppa019362mg [Prunus persica]
Length = 558
Score = 79.3 bits (194), Expect = 5e-13
Identities = 43/100 (43%), Positives = 55/100 (55%)
Frame = +2
Query: 77 TKSLPQIAQIHQHLAACGLYADPSVATKLLQLYADAGDLPSALRLFAVIPSPSVFAWTPI 256
+KSL Q +HQ + CGL +P + TKL+Q+YAD DL S+ +LF + P+VFAWT I
Sbjct: 36 SKSLNQGKHVHQKIIQCGLDQNPFIVTKLVQMYADCDDLVSSWKLFDNLLKPNVFAWTAI 95
Query: 257 LAXXXXXXXXXXXXXXXXXMRFAAVAPDGYVFPLVLRSAA 376
L M V PDGYVFP VLR+ A
Sbjct: 96 LGFYSRHGMHEECVRAYVEMILNDVLPDGYVFPKVLRACA 135
>gb|EOX91375.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 635
Score = 77.0 bits (188), Expect = 2e-12
Identities = 40/99 (40%), Positives = 57/99 (57%)
Frame = +2
Query: 77 TKSLPQIAQIHQHLAACGLYADPSVATKLLQLYADAGDLPSALRLFAVIPSPSVFAWTPI 256
+KSL Q QIH + + G + + + TKL+Q+YAD DL SA +LF +P P+VF+WT I
Sbjct: 33 SKSLSQGKQIHPQIISNGSHQNTFIITKLVQMYADCDDLVSANKLFDRLPQPNVFSWTAI 92
Query: 257 LAXXXXXXXXXXXXXXXXXMRFAAVAPDGYVFPLVLRSA 373
L M+ + V PDG+VFP VLR++
Sbjct: 93 LGLYSRHGMYRKCIESYCEMKMSGVLPDGFVFPKVLRAS 131
>ref|XP_002523554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223537116|gb|EEF38749.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 611
Score = 75.5 bits (184), Expect = 7e-12
Identities = 41/97 (42%), Positives = 52/97 (53%)
Frame = +2
Query: 80 KSLPQIAQIHQHLAACGLYADPSVATKLLQLYADAGDLPSALRLFAVIPSPSVFAWTPIL 259
KSL QIHQ + G DP + TKL+Q+YAD L SA RLF +P P+V+AWT I
Sbjct: 9 KSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQRLFDKMPQPNVYAWTAIF 68
Query: 260 AXXXXXXXXXXXXXXXXXMRFAAVAPDGYVFPLVLRS 370
M+++ V PD YVFP VLR+
Sbjct: 69 GFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRA 105
>gb|ESW27929.1| hypothetical protein PHAVU_003G244800g [Phaseolus vulgaris]
Length = 619
Score = 70.1 bits (170), Expect = 3e-10
Identities = 39/101 (38%), Positives = 53/101 (52%)
Frame = +2
Query: 74 ATKSLPQIAQIHQHLAACGLYADPSVATKLLQLYADAGDLPSALRLFAVIPSPSVFAWTP 253
A K+L Q Q+H + + +P TKL+Q+YAD DL SAL L + P+VFA+T
Sbjct: 14 ACKTLNQAKQLHNCILQTASHRNPFFVTKLIQIYADCNDLRSALTLLHQLSQPNVFAFTS 73
Query: 254 ILAXXXXXXXXXXXXXXXXXMRFAAVAPDGYVFPLVLRSAA 376
IL+ +R V PDGYVFP VL++ A
Sbjct: 74 ILSFHSKHGHPHHCIQTYAKLRQNGVVPDGYVFPKVLKACA 114
>ref|XP_003551036.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Glycine max]
Length = 619
Score = 69.3 bits (168), Expect = 5e-10
Identities = 39/101 (38%), Positives = 54/101 (53%)
Frame = +2
Query: 74 ATKSLPQIAQIHQHLAACGLYADPSVATKLLQLYADAGDLPSALRLFAVIPSPSVFAWTP 253
A K+L Q Q+H + G + + TKL+Q+YAD+ DL SA+ L I P+VFA+T
Sbjct: 14 ACKTLNQAKQLHHRILLTGSHHNHFFVTKLIQIYADSNDLRSAVTLLHQISHPNVFAFTS 73
Query: 254 ILAXXXXXXXXXXXXXXXXXMRFAAVAPDGYVFPLVLRSAA 376
IL+ +R V PDGYVFP VL++ A
Sbjct: 74 ILSFHSRHGLGHQCIQTYAELRRNGVVPDGYVFPKVLKACA 114
>ref|XP_006360219.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Solanum tuberosum]
Length = 638
Score = 66.6 bits (161), Expect = 3e-09
Identities = 35/100 (35%), Positives = 52/100 (52%)
Frame = +2
Query: 77 TKSLPQIAQIHQHLAACGLYADPSVATKLLQLYADAGDLPSALRLFAVIPSPSVFAWTPI 256
+KS+ Q Q HQ + G +P + TKL+Q+Y + D+ SA LF + +V+AWT +
Sbjct: 36 SKSVDQGKQTHQQIIVHGQSHNPFIITKLIQVYTERDDIISAQNLFVKLSQRNVYAWTAM 95
Query: 257 LAXXXXXXXXXXXXXXXXXMRFAAVAPDGYVFPLVLRSAA 376
++ M+ + PDGYVFPLVLR A
Sbjct: 96 ISYFSRNRLIKECVNTYKEMKLDNILPDGYVFPLVLRVCA 135
>ref|XP_004233437.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Solanum lycopersicum]
Length = 638
Score = 63.5 bits (153), Expect = 3e-08
Identities = 33/100 (33%), Positives = 50/100 (50%)
Frame = +2
Query: 77 TKSLPQIAQIHQHLAACGLYADPSVATKLLQLYADAGDLPSALRLFAVIPSPSVFAWTPI 256
+ S+ Q Q HQ + G +P + TKL+Q+Y + D+ A LF + +VFAWT +
Sbjct: 36 SNSVDQAKQTHQQVIVHGQSHNPFIITKLIQIYTERDDIKYAQNLFVKLSQRNVFAWTAM 95
Query: 257 LAXXXXXXXXXXXXXXXXXMRFAAVAPDGYVFPLVLRSAA 376
++ M+ + PDGY+FPLVLR A
Sbjct: 96 ISYFSRNRLIKECVNTYKEMKREDILPDGYLFPLVLRVCA 135
>gb|EXB65067.1| hypothetical protein L484_004243 [Morus notabilis]
Length = 792
Score = 62.8 bits (151), Expect = 5e-08
Identities = 30/96 (31%), Positives = 49/96 (51%)
Frame = +2
Query: 83 SLPQIAQIHQHLAACGLYADPSVATKLLQLYADAGDLPSALRLFAVIPSPSVFAWTPILA 262
+L ++ Q+H HL GL+ DP +TKL++ YA G L S+ R+F P+P F W ++
Sbjct: 13 TLTKLVQLHGHLLVSGLHKDPLASTKLIESYAQMGSLQSSTRVFESFPNPDSFMWGVLIK 72
Query: 263 XXXXXXXXXXXXXXXXXMRFAAVAPDGYVFPLVLRS 370
M + + +G++FP VLR+
Sbjct: 73 SHVWNHFFEEAIRLYHKMVYHGIHINGFIFPSVLRA 108
>ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g69350, mitochondrial-like
[Cucumis sativus]
Length = 804
Score = 59.3 bits (142), Expect = 5e-07
Identities = 31/101 (30%), Positives = 48/101 (47%)
Frame = +2
Query: 74 ATKSLPQIAQIHQHLAACGLYADPSVATKLLQLYADAGDLPSALRLFAVIPSPSVFAWTP 253
A+ +L Q+AQ+H H+ L+ DP +TKL++ Y+ GDL S+ +F SP F W
Sbjct: 10 ASTTLRQLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGV 69
Query: 254 ILAXXXXXXXXXXXXXXXXXMRFAAVAPDGYVFPLVLRSAA 376
+L M + + Y FP VLR+ +
Sbjct: 70 LLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACS 110
>gb|EXC12608.1| hypothetical protein L484_012985 [Morus notabilis]
Length = 737
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/55 (52%), Positives = 34/55 (61%)
Frame = +2
Query: 98 AQIHQHLAACGLYADPSVATKLLQLYADAGDLPSALRLFAVIPSPSVFAWTPILA 262
AQIH H GL A P V LL LYA AGDL S R+F I SP V++WT +L+
Sbjct: 77 AQIHAHAVRAGLKAYPHVFNTLLSLYAKAGDLRSVKRVFGEIESPDVYSWTTLLS 131
>gb|EMT33444.1| hypothetical protein F775_20071 [Aegilops tauschii]
Length = 647
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/62 (41%), Positives = 36/62 (58%)
Frame = +2
Query: 74 ATKSLPQIAQIHQHLAACGLYADPSVATKLLQLYADAGDLPSALRLFAVIPSPSVFAWTP 253
A +++P + QIH A CG AD L+ YAD GDLP+A LF IP P+V +W
Sbjct: 54 ACRAIPLLRQIHAFAATCGAAADRFTTNNLMLAYADLGDLPTACSLFERIPKPNVMSWNI 113
Query: 254 IL 259
++
Sbjct: 114 LI 115
>ref|XP_003528138.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g64310-like isoform X1 [Glycine max]
gi|571461143|ref|XP_006581910.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At1g64310-like isoform X2 [Glycine max]
Length = 551
Score = 57.4 bits (137), Expect = 2e-06
Identities = 33/103 (32%), Positives = 50/103 (48%)
Frame = +2
Query: 71 NATKSLPQIAQIHQHLAACGLYADPSVATKLLQLYADAGDLPSALRLFAVIPSPSVFAWT 250
N KSL + Q+H L L DP ATK+++LYA D+ SA LF P+ SV+ W
Sbjct: 14 NICKSLLRAKQLHAFLLKTHLSQDPFYATKIVRLYAANNDINSAHHLFDKTPNRSVYLWN 73
Query: 251 PILAXXXXXXXXXXXXXXXXXMRFAAVAPDGYVFPLVLRSAAS 379
++ M A ++PDG+ + V+R+ A+
Sbjct: 74 SMIRAFAQSQRFFNAISLFRTMLGADISPDGHTYACVIRACAN 116
>ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Cucumis sativus]
Length = 804
Score = 57.0 bits (136), Expect = 3e-06
Identities = 30/101 (29%), Positives = 47/101 (46%)
Frame = +2
Query: 74 ATKSLPQIAQIHQHLAACGLYADPSVATKLLQLYADAGDLPSALRLFAVIPSPSVFAWTP 253
A+ +L +AQ+H H+ L+ DP +TKL++ Y+ GDL S+ +F SP F W
Sbjct: 10 ASTTLRTLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGV 69
Query: 254 ILAXXXXXXXXXXXXXXXXXMRFAAVAPDGYVFPLVLRSAA 376
+L M + + Y FP VLR+ +
Sbjct: 70 LLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACS 110
>ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
gi|300153805|gb|EFJ20442.1| hypothetical protein
SELMODRAFT_108616 [Selaginella moellendorffii]
Length = 899
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/93 (29%), Positives = 46/93 (49%)
Frame = +2
Query: 104 IHQHLAACGLYADPSVATKLLQLYADAGDLPSALRLFAVIPSPSVFAWTPILAXXXXXXX 283
+HQH+ + G + + L+ +YA G L AL +F ++P+P+VF+WT ++
Sbjct: 48 VHQHILSSGCGVNRYIQNHLIFMYAKCGCLEDALEVFELLPNPNVFSWTALITAYAKEGH 107
Query: 284 XXXXXXXXXXMRFAAVAPDGYVFPLVLRSAASA 382
M+ PD +VF VL + +SA
Sbjct: 108 LREVLGLFRKMQLDGTKPDAFVFSTVLTACSSA 140
>ref|XP_006465305.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Citrus sinensis]
Length = 741
Score = 56.6 bits (135), Expect = 3e-06
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
Frame = +2
Query: 5 PPHSMPWQTPIXXXXXXXXXXXNATKSLPQIAQIHQHLAACGLYADPSVATKLLQLY-AD 181
PP ++ +TP+ +S+ Q+ QIH GL +P+V KL+ ++
Sbjct: 30 PPSTLTQETPLISLI-------ETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSE 82
Query: 182 AGDLPSALRLFAVIPSPSVFAWTPILAXXXXXXXXXXXXXXXXXMRFAAVAPDGYVFPLV 361
GD+ A ++F IP PSVF W ++ M + V PD Y FP +
Sbjct: 83 KGDMKYACKVFRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNYTFPFL 142
Query: 362 LR 367
L+
Sbjct: 143 LK 144
>ref|XP_006827313.1| hypothetical protein AMTR_s00010p00266520 [Amborella trichopoda]
gi|548831742|gb|ERM94550.1| hypothetical protein
AMTR_s00010p00266520 [Amborella trichopoda]
Length = 357
Score = 56.2 bits (134), Expect = 4e-06
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Frame = +2
Query: 83 SLPQIAQIHQHLAACGLYADPSVATKLLQLYADAGDLPS-ALRLFAVIPS--PSVFAWTP 253
+L +AQ H H+ GL P+ KL+ LYA +LPS A R F +PS F W
Sbjct: 21 TLATLAQAHTHVLTLGLSHHPAFVAKLVTLYARL-NLPSCAARAFDAVPSHQADTFLWNA 79
Query: 254 ILAXXXXXXXXXXXXXXXXXMRFAAVAPDGYVFPLVLRSAASAH 385
++ MR + V PDG+ +PL+L + A AH
Sbjct: 80 LIQSQASNNLPYLSLCTYMRMRRSCVEPDGFTYPLILSACAKAH 123
>emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 56.2 bits (134), Expect = 4e-06
Identities = 33/100 (33%), Positives = 45/100 (45%)
Frame = +2
Query: 77 TKSLPQIAQIHQHLAACGLYADPSVATKLLQLYADAGDLPSALRLFAVIPSPSVFAWTPI 256
+KSL + +IHQH AD SV KL +LY + A RLF IP+PSV W I
Sbjct: 21 SKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQI 80
Query: 257 LAXXXXXXXXXXXXXXXXXMRFAAVAPDGYVFPLVLRSAA 376
+ M V P+ Y +P VL++ +
Sbjct: 81 IRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS 120
>ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 56.2 bits (134), Expect = 4e-06
Identities = 33/100 (33%), Positives = 45/100 (45%)
Frame = +2
Query: 77 TKSLPQIAQIHQHLAACGLYADPSVATKLLQLYADAGDLPSALRLFAVIPSPSVFAWTPI 256
+KSL + +IHQH AD SV KL +LY + A RLF IP+PSV W I
Sbjct: 21 SKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQI 80
Query: 257 LAXXXXXXXXXXXXXXXXXMRFAAVAPDGYVFPLVLRSAA 376
+ M V P+ Y +P VL++ +
Sbjct: 81 IRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS 120
>emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 56.2 bits (134), Expect = 4e-06
Identities = 33/100 (33%), Positives = 45/100 (45%)
Frame = +2
Query: 77 TKSLPQIAQIHQHLAACGLYADPSVATKLLQLYADAGDLPSALRLFAVIPSPSVFAWTPI 256
+KSL + +IHQH AD SV KL +LY + A RLF IP+PSV W I
Sbjct: 21 SKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQI 80
Query: 257 LAXXXXXXXXXXXXXXXXXMRFAAVAPDGYVFPLVLRSAA 376
+ M V P+ Y +P VL++ +
Sbjct: 81 IRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS 120