BLASTX nr result
ID: Zingiber23_contig00050963
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00050963
(442 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containi... 69 8e-10
emb|CBI32698.3| unnamed protein product [Vitis vinifera] 69 8e-10
ref|XP_006414634.1| hypothetical protein EUTSA_v10027503mg [Eutr... 68 1e-09
ref|XP_006474640.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
ref|XP_006453289.1| hypothetical protein CICLE_v10010788mg, part... 67 2e-09
ref|XP_006449978.1| hypothetical protein CICLE_v100176691mg, par... 67 2e-09
ref|XP_004295354.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
ref|XP_002525227.1| pentatricopeptide repeat-containing protein,... 66 4e-09
ref|XP_002323645.2| pentatricopeptide repeat-containing family p... 66 5e-09
ref|NP_193218.1| pentatricopeptide repeat-containing protein [Ar... 65 7e-09
ref|XP_004305676.1| PREDICTED: putative pentatricopeptide repeat... 65 9e-09
gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indi... 65 9e-09
ref|XP_006847861.1| hypothetical protein AMTR_s00029p00078880 [A... 65 1e-08
ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
ref|XP_002308737.1| pentatricopeptide repeat-containing family p... 65 1e-08
ref|XP_006476888.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_006467236.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_006283207.1| hypothetical protein CARUB_v10004238mg [Caps... 64 2e-08
ref|XP_004295338.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_006655097.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
>ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 68.6 bits (166), Expect = 8e-10
Identities = 37/75 (49%), Positives = 49/75 (65%)
Frame = -1
Query: 226 HLLKASSRTVNSLLEAQSLHSVALKAALGHDDRVRLGLLNLYAKCGFLDTAHKLFDEMRN 47
++L AS+ TV S+ +H ALK L D V GL++LYAKCG L TAHK+FD M N
Sbjct: 474 NVLGASAETV-SIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMIN 532
Query: 46 RDVLSWTILISSYSR 2
DV+SW+ LI Y++
Sbjct: 533 PDVVSWSSLILGYAQ 547
>emb|CBI32698.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 68.6 bits (166), Expect = 8e-10
Identities = 37/75 (49%), Positives = 49/75 (65%)
Frame = -1
Query: 226 HLLKASSRTVNSLLEAQSLHSVALKAALGHDDRVRLGLLNLYAKCGFLDTAHKLFDEMRN 47
++L AS+ TV S+ +H ALK L D V GL++LYAKCG L TAHK+FD M N
Sbjct: 212 NVLGASAETV-SIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMIN 270
Query: 46 RDVLSWTILISSYSR 2
DV+SW+ LI Y++
Sbjct: 271 PDVVSWSSLILGYAQ 285
>ref|XP_006414634.1| hypothetical protein EUTSA_v10027503mg [Eutrema salsugineum]
gi|557115804|gb|ESQ56087.1| hypothetical protein
EUTSA_v10027503mg [Eutrema salsugineum]
Length = 724
Score = 67.8 bits (164), Expect = 1e-09
Identities = 35/78 (44%), Positives = 50/78 (64%)
Frame = -1
Query: 235 AFVHLLKASSRTVNSLLEAQSLHSVALKAALGHDDRVRLGLLNLYAKCGFLDTAHKLFDE 56
+F +LKA+S+ V++LLE LH VALK A D V+ GL+++Y CG + A +FDE
Sbjct: 116 SFPPILKAASK-VSALLEGLELHGVALKMATLSDPFVQTGLMDMYGSCGRIVEARNMFDE 174
Query: 55 MRNRDVLSWTILISSYSR 2
M RDV++W +I Y R
Sbjct: 175 MSQRDVVTWNTMIERYCR 192
>ref|XP_006474640.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Citrus sinensis]
Length = 580
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/83 (42%), Positives = 50/83 (60%)
Frame = -1
Query: 250 DDPTTAFVHLLKASSRTVNSLLEAQSLHSVALKAALGHDDRVRLGLLNLYAKCGFLDTAH 71
D+ T FV + A+ +N S+HS K L DD V L+ +YA+CG LD+A
Sbjct: 121 DNFTYPFVFISCANLLALN---HGVSVHSSVFKIGLDEDDHVSHSLITMYARCGKLDSAR 177
Query: 70 KLFDEMRNRDVLSWTILISSYSR 2
K+FDE+R RD++SW +IS YS+
Sbjct: 178 KVFDEIRERDLVSWNSMISGYSK 200
>ref|XP_006453289.1| hypothetical protein CICLE_v10010788mg, partial [Citrus clementina]
gi|557556515|gb|ESR66529.1| hypothetical protein
CICLE_v10010788mg, partial [Citrus clementina]
Length = 572
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/83 (42%), Positives = 50/83 (60%)
Frame = -1
Query: 250 DDPTTAFVHLLKASSRTVNSLLEAQSLHSVALKAALGHDDRVRLGLLNLYAKCGFLDTAH 71
D+ T FV + A+ +N S+HS K L DD V L+ +YA+CG LD+A
Sbjct: 118 DNFTYPFVFISCANLLALN---HGVSVHSSVFKIGLDEDDHVSHSLITMYARCGKLDSAR 174
Query: 70 KLFDEMRNRDVLSWTILISSYSR 2
K+FDE+R RD++SW +IS YS+
Sbjct: 175 KVFDEIRERDLVSWNSMISGYSK 197
>ref|XP_006449978.1| hypothetical protein CICLE_v100176691mg, partial [Citrus
clementina] gi|557552589|gb|ESR63218.1| hypothetical
protein CICLE_v100176691mg, partial [Citrus clementina]
Length = 317
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/82 (41%), Positives = 50/82 (60%)
Frame = -1
Query: 247 DPTTAFVHLLKASSRTVNSLLEAQSLHSVALKAALGHDDRVRLGLLNLYAKCGFLDTAHK 68
+P + + L + L EA+ +H+ L +A HD ++ +LN YAKCG LD A K
Sbjct: 63 EPDRSIYNTLLKKCTHLKKLKEARIVHAHILGSAFKHDIAMQNTILNAYAKCGCLDEARK 122
Query: 67 LFDEMRNRDVLSWTILISSYSR 2
LFDEM +D+++WT LIS YS+
Sbjct: 123 LFDEMPVKDMVTWTALISGYSQ 144
>ref|XP_004295354.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 821
Score = 67.0 bits (162), Expect = 2e-09
Identities = 31/74 (41%), Positives = 53/74 (71%)
Frame = -1
Query: 223 LLKASSRTVNSLLEAQSLHSVALKAALGHDDRVRLGLLNLYAKCGFLDTAHKLFDEMRNR 44
++KA +R + ++ E + +H++ALK LG + V+ L++LY+KCG ++ A K+FDEMR R
Sbjct: 260 VVKACAR-LGAVAEGKQVHALALKIGLGLEMYVQSSLVSLYSKCGAIECARKVFDEMRER 318
Query: 43 DVLSWTILISSYSR 2
D+++W LI Y+R
Sbjct: 319 DLVAWNSLIDGYAR 332
>ref|XP_002525227.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535524|gb|EEF37193.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 420
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/82 (39%), Positives = 48/82 (58%)
Frame = -1
Query: 247 DPTTAFVHLLKASSRTVNSLLEAQSLHSVALKAALGHDDRVRLGLLNLYAKCGFLDTAHK 68
+P H+L N L E Q +H+ L + HD ++ +LN+YAKCG L A K
Sbjct: 78 EPDRTLYHILFKKCTLFNKLKEGQLVHAHLLNSRFKHDLVIQNTILNMYAKCGNLGEARK 137
Query: 67 LFDEMRNRDVLSWTILISSYSR 2
+FD+M +DV++WT LI+ YS+
Sbjct: 138 VFDQMPVKDVVTWTALITGYSQ 159
>ref|XP_002323645.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550321449|gb|EEF05406.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 682
Score = 65.9 bits (159), Expect = 5e-09
Identities = 32/75 (42%), Positives = 50/75 (66%)
Frame = -1
Query: 232 FVHLLKASSRTVNSLLEAQSLHSVALKAALGHDDRVRLGLLNLYAKCGFLDTAHKLFDEM 53
F +LKA +R ++S L + +HS+ +KA D V++ L+NLY KCGF+D A K+FD++
Sbjct: 111 FPFVLKACARVLDSELGVK-MHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDI 169
Query: 52 RNRDVLSWTILISSY 8
+++ SWT IS Y
Sbjct: 170 PDKNFASWTATISGY 184
>ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g14820 gi|2244839|emb|CAB10261.1| hypothetical
protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein
[Arabidopsis thaliana] gi|332658106|gb|AEE83506.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 722
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/78 (42%), Positives = 49/78 (62%)
Frame = -1
Query: 235 AFVHLLKASSRTVNSLLEAQSLHSVALKAALGHDDRVRLGLLNLYAKCGFLDTAHKLFDE 56
+F+ +LKA S+ V++L E LH VA K A D V G +++YA CG ++ A +FDE
Sbjct: 113 SFLPILKAVSK-VSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDE 171
Query: 55 MRNRDVLSWTILISSYSR 2
M +RDV++W +I Y R
Sbjct: 172 MSHRDVVTWNTMIERYCR 189
>ref|XP_004305676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Fragaria vesca subsp. vesca]
Length = 1043
Score = 65.1 bits (157), Expect = 9e-09
Identities = 43/123 (34%), Positives = 57/123 (46%)
Frame = -1
Query: 370 FASASVPLPGDLPSSPRHXXXXXXXXXXXXXPHPPLRSPTDDPTTAFVHLLKASSRTVNS 191
F S + PLP D SP H HP +P T + +LL ++
Sbjct: 20 FTSLAAPLPSD---SPHHHQSS----------HPHTETPPPHSTPTYANLLHQFKNSLTQ 66
Query: 190 LLEAQSLHSVALKAALGHDDRVRLGLLNLYAKCGFLDTAHKLFDEMRNRDVLSWTILISS 11
EA++ HS LK D + LLNLY K G L A LFDEM +R+ ++W LIS
Sbjct: 67 N-EAETFHSKILKHGFTQDLFLSNALLNLYVKIGSLSNARHLFDEMPHRNSVTWACLISG 125
Query: 10 YSR 2
Y+R
Sbjct: 126 YAR 128
>gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/91 (34%), Positives = 59/91 (64%)
Frame = -1
Query: 274 HPPLRSPTDDPTTAFVHLLKASSRTVNSLLEAQSLHSVALKAALGHDDRVRLGLLNLYAK 95
H +R ++ F L+ A++ +V L + Q LH+++LKA G D V L+++Y++
Sbjct: 439 HRIVRMDVGISSSTFASLISAAA-SVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSR 497
Query: 94 CGFLDTAHKLFDEMRNRDVLSWTILISSYSR 2
CG+L+ A + F+E+++R+V+SWT +IS ++
Sbjct: 498 CGYLEDACRSFNELKDRNVISWTSMISGLAK 528
>ref|XP_006847861.1| hypothetical protein AMTR_s00029p00078880 [Amborella trichopoda]
gi|548851166|gb|ERN09442.1| hypothetical protein
AMTR_s00029p00078880 [Amborella trichopoda]
Length = 212
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/74 (40%), Positives = 47/74 (63%)
Frame = -1
Query: 223 LLKASSRTVNSLLEAQSLHSVALKAALGHDDRVRLGLLNLYAKCGFLDTAHKLFDEMRNR 44
LL +S + L + +HS A+K L D V +L+ YA CG ++ AH++F+EM +R
Sbjct: 83 LLSKASANLGDLQVSMEIHSQAIKLGLDQDAFVMNSMLHAYASCGGMEFAHEMFNEMAHR 142
Query: 43 DVLSWTILISSYSR 2
DV+SWT +I+ Y+R
Sbjct: 143 DVVSWTAVIAGYAR 156
>ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/80 (37%), Positives = 53/80 (66%)
Frame = -1
Query: 241 TTAFVHLLKASSRTVNSLLEAQSLHSVALKAALGHDDRVRLGLLNLYAKCGFLDTAHKLF 62
T F LL A++ +V L + Q LH++++KA D + L+++YA+CG+L+ A + F
Sbjct: 446 TFTFASLLSAAA-SVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAF 504
Query: 61 DEMRNRDVLSWTILISSYSR 2
DEM++ +V+SWT +IS ++
Sbjct: 505 DEMKDHNVISWTSIISGLAK 524
>ref|XP_002308737.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222854713|gb|EEE92260.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 590
Score = 64.7 bits (156), Expect = 1e-08
Identities = 34/75 (45%), Positives = 47/75 (62%)
Frame = -1
Query: 226 HLLKASSRTVNSLLEAQSLHSVALKAALGHDDRVRLGLLNLYAKCGFLDTAHKLFDEMRN 47
H L +N L E + +H++ L + D ++ LLNLYAKCG L A KLFDEM +
Sbjct: 19 HTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSS 78
Query: 46 RDVLSWTILISSYSR 2
RDV++WT LI+ YS+
Sbjct: 79 RDVVTWTALITGYSQ 93
>ref|XP_006476888.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Citrus sinensis]
Length = 695
Score = 64.3 bits (155), Expect = 2e-08
Identities = 34/86 (39%), Positives = 48/86 (55%)
Frame = -1
Query: 265 LRSPTDDPTTAFVHLLKASSRTVNSLLEAQSLHSVALKAALGHDDRVRLGLLNLYAKCGF 86
L++ + F LKA SR + +L E + +H+ LK+ G V L++LYA CG
Sbjct: 113 LQNSVEPDRFTFACTLKACSR-IRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGR 171
Query: 85 LDTAHKLFDEMRNRDVLSWTILISSY 8
+D A K+FD M NRDV SW + S Y
Sbjct: 172 IDIARKMFDRMSNRDVFSWNSMFSGY 197
>ref|XP_006467236.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Citrus sinensis]
Length = 670
Score = 64.3 bits (155), Expect = 2e-08
Identities = 33/82 (40%), Positives = 50/82 (60%)
Frame = -1
Query: 247 DPTTAFVHLLKASSRTVNSLLEAQSLHSVALKAALGHDDRVRLGLLNLYAKCGFLDTAHK 68
+P + + L + L EA+ +H+ L +A +D ++ +LN YAKCG LD A K
Sbjct: 93 EPDRSIYNTLLKKCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARK 152
Query: 67 LFDEMRNRDVLSWTILISSYSR 2
LFDEM +D+++WT LIS YS+
Sbjct: 153 LFDEMPVKDMVTWTALISGYSQ 174
>ref|XP_006283207.1| hypothetical protein CARUB_v10004238mg [Capsella rubella]
gi|482551912|gb|EOA16105.1| hypothetical protein
CARUB_v10004238mg [Capsella rubella]
Length = 724
Score = 64.3 bits (155), Expect = 2e-08
Identities = 31/78 (39%), Positives = 48/78 (61%)
Frame = -1
Query: 235 AFVHLLKASSRTVNSLLEAQSLHSVALKAALGHDDRVRLGLLNLYAKCGFLDTAHKLFDE 56
+F +LKA+ + V++ E +H VA K A D V+ GL+++YA CG ++ A +FDE
Sbjct: 116 SFPPILKAACK-VSAFFEGMEIHGVAFKMATLSDPFVQTGLMDMYASCGRIECARNVFDE 174
Query: 55 MRNRDVLSWTILISSYSR 2
M RDV++W +I Y R
Sbjct: 175 MSQRDVVTWNTMIDRYCR 192
>ref|XP_004295338.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 650
Score = 64.3 bits (155), Expect = 2e-08
Identities = 36/87 (41%), Positives = 51/87 (58%)
Frame = -1
Query: 262 RSPTDDPTTAFVHLLKASSRTVNSLLEAQSLHSVALKAALGHDDRVRLGLLNLYAKCGFL 83
R+ + T + LL S+T L +A +H+ L + +D + LLN Y KCG L
Sbjct: 67 RASLEADRTLYSKLLNKCSQT-GQLKQATIVHAHMLTSQFNNDLPILNTLLNTYVKCGSL 125
Query: 82 DTAHKLFDEMRNRDVLSWTILISSYSR 2
D AH LFDEM +RD+++WT LIS YS+
Sbjct: 126 DHAHHLFDEMPHRDLVTWTSLISGYSQ 152
>ref|XP_006655097.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Oryza brachyantha]
Length = 819
Score = 63.9 bits (154), Expect = 2e-08
Identities = 29/80 (36%), Positives = 56/80 (70%)
Frame = -1
Query: 241 TTAFVHLLKASSRTVNSLLEAQSLHSVALKAALGHDDRVRLGLLNLYAKCGFLDTAHKLF 62
++ F L+ A++ +V L + Q LH+++LKA G D V L+++Y++CG+L+ A + F
Sbjct: 447 SSIFASLISAAA-SVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSF 505
Query: 61 DEMRNRDVLSWTILISSYSR 2
+E+++R+V+SWT +IS ++
Sbjct: 506 NELKDRNVISWTSMISGLAK 525