BLASTX nr result
ID: Zingiber23_contig00050926
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00050926
(317 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006421008.1| hypothetical protein CICLE_v10004117mg [Citr... 140 2e-31
ref|XP_006489856.1| PREDICTED: small subunit processome componen... 137 1e-30
ref|XP_006489855.1| PREDICTED: small subunit processome componen... 137 1e-30
ref|XP_006489854.1| PREDICTED: small subunit processome componen... 137 1e-30
emb|CBI17281.3| unnamed protein product [Vitis vinifera] 137 1e-30
emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera] 137 1e-30
ref|XP_004247966.1| PREDICTED: small subunit processome componen... 135 4e-30
ref|XP_006360968.1| PREDICTED: small subunit processome componen... 132 4e-29
ref|XP_006839008.1| hypothetical protein AMTR_s00002p00271990 [A... 132 6e-29
gb|EOY05174.1| ARM repeat superfamily protein, putative [Theobro... 132 6e-29
ref|XP_002518041.1| conserved hypothetical protein [Ricinus comm... 129 5e-28
gb|EMS50081.1| Small subunit processome component 20-like protei... 126 3e-27
ref|XP_004167386.1| PREDICTED: LOW QUALITY PROTEIN: small subuni... 125 6e-27
ref|XP_004139015.1| PREDICTED: small subunit processome componen... 125 6e-27
gb|EEE54879.1| hypothetical protein OsJ_02376 [Oryza sativa Japo... 125 6e-27
gb|EEC70970.1| hypothetical protein OsI_02594 [Oryza sativa Indi... 125 6e-27
ref|XP_006369815.1| hypothetical protein POPTR_0001s32620g [Popu... 124 1e-26
ref|XP_006646040.1| PREDICTED: U3 small nucleolar RNA-associated... 123 2e-26
tpg|DAA53120.1| TPA: hypothetical protein ZEAMMB73_114002 [Zea m... 122 4e-26
tpg|DAA53119.1| TPA: hypothetical protein ZEAMMB73_114002 [Zea m... 122 4e-26
>ref|XP_006421008.1| hypothetical protein CICLE_v10004117mg [Citrus clementina]
gi|557522881|gb|ESR34248.1| hypothetical protein
CICLE_v10004117mg [Citrus clementina]
Length = 2651
Score = 140 bits (353), Expect = 2e-31
Identities = 66/102 (64%), Positives = 84/102 (82%)
Frame = -1
Query: 311 DADIQLKVLDCLLNWKDDFLISYEKHLKNLIISKNLREGLATWSVSKESQCIQEEHRCHF 132
DA+IQ+KVLDCLL WKDDFLI Y +HL+NLI SK+LRE L TWS+S+ES I+++HR +
Sbjct: 911 DAEIQMKVLDCLLVWKDDFLIPYHQHLRNLINSKSLREELTTWSLSRESHLIEDDHRSNL 970
Query: 131 IPILIRLLTPKVWTLKTLGSRKHTGLALRKAILCFLAQLEVD 6
+P++IRLL PKV LKTL SRKH + RKA+LCF+AQL+VD
Sbjct: 971 LPLVIRLLMPKVRKLKTLASRKHASIYHRKAVLCFVAQLDVD 1012
>ref|XP_006489856.1| PREDICTED: small subunit processome component 20 homolog isoform X3
[Citrus sinensis]
Length = 2306
Score = 137 bits (346), Expect = 1e-30
Identities = 65/102 (63%), Positives = 83/102 (81%)
Frame = -1
Query: 311 DADIQLKVLDCLLNWKDDFLISYEKHLKNLIISKNLREGLATWSVSKESQCIQEEHRCHF 132
DA+IQ+KVLDCLL WKDDFLI Y +HL+NLI SK+LRE L TWS+S+ES I+++HR +
Sbjct: 542 DAEIQMKVLDCLLVWKDDFLIPYHQHLRNLINSKSLREELTTWSLSRESHLIEDDHRSNL 601
Query: 131 IPILIRLLTPKVWTLKTLGSRKHTGLALRKAILCFLAQLEVD 6
+P++I LL PKV LKTL SRKH + RKA+LCF+AQL+VD
Sbjct: 602 VPLVICLLMPKVRKLKTLASRKHASIYHRKAVLCFVAQLDVD 643
>ref|XP_006489855.1| PREDICTED: small subunit processome component 20 homolog isoform X2
[Citrus sinensis]
Length = 2702
Score = 137 bits (346), Expect = 1e-30
Identities = 65/102 (63%), Positives = 83/102 (81%)
Frame = -1
Query: 311 DADIQLKVLDCLLNWKDDFLISYEKHLKNLIISKNLREGLATWSVSKESQCIQEEHRCHF 132
DA+IQ+KVLDCLL WKDDFLI Y +HL+NLI SK+LRE L TWS+S+ES I+++HR +
Sbjct: 938 DAEIQMKVLDCLLVWKDDFLIPYHQHLRNLINSKSLREELTTWSLSRESHLIEDDHRSNL 997
Query: 131 IPILIRLLTPKVWTLKTLGSRKHTGLALRKAILCFLAQLEVD 6
+P++I LL PKV LKTL SRKH + RKA+LCF+AQL+VD
Sbjct: 998 VPLVICLLMPKVRKLKTLASRKHASIYHRKAVLCFVAQLDVD 1039
>ref|XP_006489854.1| PREDICTED: small subunit processome component 20 homolog isoform X1
[Citrus sinensis]
Length = 2703
Score = 137 bits (346), Expect = 1e-30
Identities = 65/102 (63%), Positives = 83/102 (81%)
Frame = -1
Query: 311 DADIQLKVLDCLLNWKDDFLISYEKHLKNLIISKNLREGLATWSVSKESQCIQEEHRCHF 132
DA+IQ+KVLDCLL WKDDFLI Y +HL+NLI SK+LRE L TWS+S+ES I+++HR +
Sbjct: 939 DAEIQMKVLDCLLVWKDDFLIPYHQHLRNLINSKSLREELTTWSLSRESHLIEDDHRSNL 998
Query: 131 IPILIRLLTPKVWTLKTLGSRKHTGLALRKAILCFLAQLEVD 6
+P++I LL PKV LKTL SRKH + RKA+LCF+AQL+VD
Sbjct: 999 VPLVICLLMPKVRKLKTLASRKHASIYHRKAVLCFVAQLDVD 1040
>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
Length = 2629
Score = 137 bits (345), Expect = 1e-30
Identities = 64/102 (62%), Positives = 84/102 (82%)
Frame = -1
Query: 311 DADIQLKVLDCLLNWKDDFLISYEKHLKNLIISKNLREGLATWSVSKESQCIQEEHRCHF 132
DA+IQ++VLDCLL WKD+FL+ Y++HLKNLI SKNLRE L TWS+S+ES ++E+HR
Sbjct: 906 DAEIQMQVLDCLLFWKDNFLLPYDQHLKNLISSKNLREELTTWSLSRESNLVEEQHRTCL 965
Query: 131 IPILIRLLTPKVWTLKTLGSRKHTGLALRKAILCFLAQLEVD 6
+P++IRLL PKV LKTL SRKHT + RKA+L F+AQL+V+
Sbjct: 966 VPVVIRLLVPKVRKLKTLASRKHTSVHHRKAVLAFIAQLDVN 1007
>emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera]
Length = 2461
Score = 137 bits (345), Expect = 1e-30
Identities = 64/102 (62%), Positives = 84/102 (82%)
Frame = -1
Query: 311 DADIQLKVLDCLLNWKDDFLISYEKHLKNLIISKNLREGLATWSVSKESQCIQEEHRCHF 132
DA+IQ++VLDCLL WKD+FL+ Y++HLKNLI SKNLRE L TWS+S+ES ++E+HR
Sbjct: 630 DAEIQMQVLDCLLFWKDNFLLPYDQHLKNLISSKNLREELTTWSLSRESNLVEEQHRTCL 689
Query: 131 IPILIRLLTPKVWTLKTLGSRKHTGLALRKAILCFLAQLEVD 6
+P++IRLL PKV LKTL SRKHT + RKA+L F+AQL+V+
Sbjct: 690 VPVVIRLLVPKVRKLKTLASRKHTSVHHRKAVLAFIAQLDVN 731
>ref|XP_004247966.1| PREDICTED: small subunit processome component 20 homolog [Solanum
lycopersicum]
Length = 2660
Score = 135 bits (341), Expect = 4e-30
Identities = 66/102 (64%), Positives = 80/102 (78%)
Frame = -1
Query: 311 DADIQLKVLDCLLNWKDDFLISYEKHLKNLIISKNLREGLATWSVSKESQCIQEEHRCHF 132
DAD+Q KVLDCLLNWKDDFL+ YE+HLKNLI SK+LRE L TWS+S+ES + HR
Sbjct: 919 DADLQSKVLDCLLNWKDDFLLPYEQHLKNLINSKSLREELTTWSLSRESDLVDTRHRAFL 978
Query: 131 IPILIRLLTPKVWTLKTLGSRKHTGLALRKAILCFLAQLEVD 6
+PI+IR+L+PKV LK L SRKH + RKAIL FLAQL+V+
Sbjct: 979 VPIVIRVLSPKVRKLKALASRKHASVHHRKAILGFLAQLDVE 1020
>ref|XP_006360968.1| PREDICTED: small subunit processome component 20 homolog [Solanum
tuberosum]
Length = 1461
Score = 132 bits (333), Expect = 4e-29
Identities = 63/102 (61%), Positives = 80/102 (78%)
Frame = -1
Query: 311 DADIQLKVLDCLLNWKDDFLISYEKHLKNLIISKNLREGLATWSVSKESQCIQEEHRCHF 132
DAD+Q KVLDCLLNWKDDFL+ Y++HLKNLI SK+LRE L TWS+S+ES + HR
Sbjct: 932 DADMQSKVLDCLLNWKDDFLLPYDQHLKNLINSKSLREELTTWSLSRESDLVDTRHRAFL 991
Query: 131 IPILIRLLTPKVWTLKTLGSRKHTGLALRKAILCFLAQLEVD 6
+P++IR+L+PKV LK L SRKH + RKAIL FL+QL+V+
Sbjct: 992 VPVVIRVLSPKVRKLKALASRKHASVHHRKAILGFLSQLDVE 1033
>ref|XP_006839008.1| hypothetical protein AMTR_s00002p00271990 [Amborella trichopoda]
gi|548841514|gb|ERN01577.1| hypothetical protein
AMTR_s00002p00271990 [Amborella trichopoda]
Length = 2766
Score = 132 bits (331), Expect = 6e-29
Identities = 65/104 (62%), Positives = 80/104 (76%)
Frame = -1
Query: 317 DVDADIQLKVLDCLLNWKDDFLISYEKHLKNLIISKNLREGLATWSVSKESQCIQEEHRC 138
D D DIQ+KV+DCLLNWKD+FL+ Y HLKNLI K+ RE L TWS+SKES I E+HR
Sbjct: 972 DNDPDIQMKVVDCLLNWKDEFLLPYGLHLKNLIDPKSTREELTTWSLSKESDHIHEQHRN 1031
Query: 137 HFIPILIRLLTPKVWTLKTLGSRKHTGLALRKAILCFLAQLEVD 6
+ IP++IR+L PKV LK + SRK TG R+A+LCFLAQLEV+
Sbjct: 1032 NLIPLIIRILVPKVRKLKIVKSRKSTGALHRRALLCFLAQLEVN 1075
>gb|EOY05174.1| ARM repeat superfamily protein, putative [Theobroma cacao]
Length = 2725
Score = 132 bits (331), Expect = 6e-29
Identities = 63/102 (61%), Positives = 80/102 (78%)
Frame = -1
Query: 317 DVDADIQLKVLDCLLNWKDDFLISYEKHLKNLIISKNLREGLATWSVSKESQCIQEEHRC 138
+ DA+IQ +VLDCLL WKDDFL+ Y++HLKNLI SK LRE L TWS+SKES I+E HR
Sbjct: 933 ETDAEIQARVLDCLLLWKDDFLLPYDQHLKNLINSKYLREELTTWSLSKESGLIEEAHRV 992
Query: 137 HFIPILIRLLTPKVWTLKTLGSRKHTGLALRKAILCFLAQLE 12
+P+++RLL PK+ LKTL SRKH + LRKA+L F+AQL+
Sbjct: 993 TLVPLVVRLLIPKIRKLKTLASRKHASVHLRKAVLGFIAQLD 1034
>ref|XP_002518041.1| conserved hypothetical protein [Ricinus communis]
gi|223542637|gb|EEF44174.1| conserved hypothetical
protein [Ricinus communis]
Length = 2535
Score = 129 bits (323), Expect = 5e-28
Identities = 62/102 (60%), Positives = 80/102 (78%)
Frame = -1
Query: 311 DADIQLKVLDCLLNWKDDFLISYEKHLKNLIISKNLREGLATWSVSKESQCIQEEHRCHF 132
DA+IQ++VLDCLL WKDDFL+ YE HL+NLI SK+LRE L TWS+S+ES I+E HR +
Sbjct: 900 DAEIQMRVLDCLLTWKDDFLLPYEGHLRNLISSKHLREELTTWSLSRESLLIEESHRANL 959
Query: 131 IPILIRLLTPKVWTLKTLGSRKHTGLALRKAILCFLAQLEVD 6
+P++I LL PKV KTL SRKHT RKA+L F+A+L+V+
Sbjct: 960 LPLIIFLLIPKVRKPKTLASRKHTSAHHRKAVLRFIAELDVN 1001
>gb|EMS50081.1| Small subunit processome component 20-like protein [Triticum urartu]
Length = 2665
Score = 126 bits (317), Expect = 3e-27
Identities = 63/100 (63%), Positives = 77/100 (77%)
Frame = -1
Query: 311 DADIQLKVLDCLLNWKDDFLISYEKHLKNLIISKNLREGLATWSVSKESQCIQEEHRCHF 132
D DIQ K LDC+LNWKD+FLI Y ++LKNLI K LRE L TW+VS +S IQ+ HR H
Sbjct: 913 DPDIQAKALDCILNWKDEFLIPYIQNLKNLIGLKTLREELTTWAVSHDSLSIQKCHRSHV 972
Query: 131 IPILIRLLTPKVWTLKTLGSRKHTGLALRKAILCFLAQLE 12
+P++IR+LTPKV LK LGSRKHTG++ RKAIL FL Q +
Sbjct: 973 VPLVIRVLTPKVRKLKLLGSRKHTGVSHRKAILRFLLQFD 1012
>ref|XP_004167386.1| PREDICTED: LOW QUALITY PROTEIN: small subunit processome component 20
homolog, partial [Cucumis sativus]
Length = 2538
Score = 125 bits (314), Expect = 6e-27
Identities = 63/102 (61%), Positives = 75/102 (73%)
Frame = -1
Query: 317 DVDADIQLKVLDCLLNWKDDFLISYEKHLKNLIISKNLREGLATWSVSKESQCIQEEHRC 138
D DA+IQ KVLDCLL WKDDFLIS+E+HLKN+I K LRE L WS+SKE I E HR
Sbjct: 808 DNDAEIQSKVLDCLLMWKDDFLISHEQHLKNIISPKTLREELTRWSLSKEKNQIDERHRP 867
Query: 137 HFIPILIRLLTPKVWTLKTLGSRKHTGLALRKAILCFLAQLE 12
+P++ RLL PKV LK LGSRK + LRKA+L F+AQL+
Sbjct: 868 KLVPLVTRLLMPKVRKLKVLGSRKQASVNLRKAVLQFIAQLD 909
>ref|XP_004139015.1| PREDICTED: small subunit processome component 20 homolog [Cucumis
sativus]
Length = 2696
Score = 125 bits (314), Expect = 6e-27
Identities = 63/102 (61%), Positives = 75/102 (73%)
Frame = -1
Query: 317 DVDADIQLKVLDCLLNWKDDFLISYEKHLKNLIISKNLREGLATWSVSKESQCIQEEHRC 138
D DA+IQ KVLDCLL WKDDFLIS+E+HLKN+I K LRE L WS+SKE I E HR
Sbjct: 966 DNDAEIQSKVLDCLLMWKDDFLISHEQHLKNIISPKTLREELTRWSLSKEKNQIDERHRP 1025
Query: 137 HFIPILIRLLTPKVWTLKTLGSRKHTGLALRKAILCFLAQLE 12
+P++ RLL PKV LK LGSRK + LRKA+L F+AQL+
Sbjct: 1026 KLVPLVTRLLMPKVRKLKVLGSRKQASVNLRKAVLQFIAQLD 1067
>gb|EEE54879.1| hypothetical protein OsJ_02376 [Oryza sativa Japonica Group]
Length = 2372
Score = 125 bits (314), Expect = 6e-27
Identities = 62/100 (62%), Positives = 75/100 (75%)
Frame = -1
Query: 311 DADIQLKVLDCLLNWKDDFLISYEKHLKNLIISKNLREGLATWSVSKESQCIQEEHRCHF 132
D DIQ K LDCLLNWKD+FL Y K LKNLI SK LRE L TW+VS +S IQ++HR
Sbjct: 643 DPDIQSKALDCLLNWKDEFLTPYSKSLKNLIDSKTLREELTTWAVSYDSLSIQKDHRSSV 702
Query: 131 IPILIRLLTPKVWTLKTLGSRKHTGLALRKAILCFLAQLE 12
+P++IR+LTPK+ K LGSRKHTG++ RKAIL FL Q +
Sbjct: 703 VPLVIRVLTPKLKKFKLLGSRKHTGVSHRKAILRFLMQFD 742
>gb|EEC70970.1| hypothetical protein OsI_02594 [Oryza sativa Indica Group]
Length = 2389
Score = 125 bits (314), Expect = 6e-27
Identities = 62/100 (62%), Positives = 75/100 (75%)
Frame = -1
Query: 311 DADIQLKVLDCLLNWKDDFLISYEKHLKNLIISKNLREGLATWSVSKESQCIQEEHRCHF 132
D DIQ K LDCLLNWKD+FL Y K LKNLI SK LRE L TW+VS +S IQ++HR
Sbjct: 643 DPDIQSKALDCLLNWKDEFLTPYSKSLKNLIDSKTLREELTTWAVSYDSLSIQKDHRSSV 702
Query: 131 IPILIRLLTPKVWTLKTLGSRKHTGLALRKAILCFLAQLE 12
+P++IR+LTPK+ K LGSRKHTG++ RKAIL FL Q +
Sbjct: 703 VPLVIRVLTPKLKKFKLLGSRKHTGVSHRKAILRFLMQFD 742
>ref|XP_006369815.1| hypothetical protein POPTR_0001s32620g [Populus trichocarpa]
gi|550348719|gb|ERP66384.1| hypothetical protein
POPTR_0001s32620g [Populus trichocarpa]
Length = 2597
Score = 124 bits (312), Expect = 1e-26
Identities = 60/101 (59%), Positives = 75/101 (74%)
Frame = -1
Query: 311 DADIQLKVLDCLLNWKDDFLISYEKHLKNLIISKNLREGLATWSVSKESQCIQEEHRCHF 132
D IQ VLDCLL WKDDFL+ YE+HL+NLI S +LRE L TWS+S+ES I+E HR +
Sbjct: 827 DVHIQTSVLDCLLTWKDDFLLQYEQHLRNLISSNHLREELITWSLSRESAVIEEGHRANL 886
Query: 131 IPILIRLLTPKVWTLKTLGSRKHTGLALRKAILCFLAQLEV 9
+P++I LL PKV LK L SRKHT + RK +L F+AQL+V
Sbjct: 887 VPLVILLLMPKVRKLKMLASRKHTSINQRKVVLRFIAQLDV 927
>ref|XP_006646040.1| PREDICTED: U3 small nucleolar RNA-associated protein 20-like [Oryza
brachyantha]
Length = 1825
Score = 123 bits (309), Expect = 2e-26
Identities = 61/100 (61%), Positives = 77/100 (77%)
Frame = -1
Query: 311 DADIQLKVLDCLLNWKDDFLISYEKHLKNLIISKNLREGLATWSVSKESQCIQEEHRCHF 132
D DIQ K LDCLLNWKD+F+ Y ++LKNLI SK LRE L TW+VS +S IQ++HR
Sbjct: 63 DPDIQSKALDCLLNWKDEFMTPYSQNLKNLIDSKTLREELTTWAVSCDSLSIQKDHRRCV 122
Query: 131 IPILIRLLTPKVWTLKTLGSRKHTGLALRKAILCFLAQLE 12
+P++IR+LTPK+ LK LGSRKHTG++ RKAIL FL Q +
Sbjct: 123 VPLVIRVLTPKLRKLKLLGSRKHTGVSHRKAILRFLMQFD 162
>tpg|DAA53120.1| TPA: hypothetical protein ZEAMMB73_114002 [Zea mays]
Length = 914
Score = 122 bits (307), Expect = 4e-26
Identities = 61/102 (59%), Positives = 75/102 (73%)
Frame = -1
Query: 317 DVDADIQLKVLDCLLNWKDDFLISYEKHLKNLIISKNLREGLATWSVSKESQCIQEEHRC 138
D D +IQ K LDCLLNWKD+FLI Y ++LKNLI K LRE L TW+VS +S I ++HR
Sbjct: 640 DSDPEIQAKALDCLLNWKDEFLIPYSQNLKNLIDVKTLREELTTWAVSHDSLSILKDHRS 699
Query: 137 HFIPILIRLLTPKVWTLKTLGSRKHTGLALRKAILCFLAQLE 12
+P++IR+L PKV LK LGSRKHTG + RKAIL FL Q +
Sbjct: 700 RVVPLVIRVLAPKVRKLKLLGSRKHTGASHRKAILRFLLQFD 741
>tpg|DAA53119.1| TPA: hypothetical protein ZEAMMB73_114002 [Zea mays]
Length = 2530
Score = 122 bits (307), Expect = 4e-26
Identities = 61/102 (59%), Positives = 75/102 (73%)
Frame = -1
Query: 317 DVDADIQLKVLDCLLNWKDDFLISYEKHLKNLIISKNLREGLATWSVSKESQCIQEEHRC 138
D D +IQ K LDCLLNWKD+FLI Y ++LKNLI K LRE L TW+VS +S I ++HR
Sbjct: 840 DSDPEIQAKALDCLLNWKDEFLIPYSQNLKNLIDVKTLREELTTWAVSHDSLSILKDHRS 899
Query: 137 HFIPILIRLLTPKVWTLKTLGSRKHTGLALRKAILCFLAQLE 12
+P++IR+L PKV LK LGSRKHTG + RKAIL FL Q +
Sbjct: 900 RVVPLVIRVLAPKVRKLKLLGSRKHTGASHRKAILRFLLQFD 941