BLASTX nr result
ID: Zingiber23_contig00050896
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00050896
(276 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004971592.1| PREDICTED: serine/threonine-protein kinase A... 67 2e-09
emb|CBI15033.3| unnamed protein product [Vitis vinifera] 65 7e-09
ref|NP_001041778.1| Os01g0106700 [Oryza sativa Japonica Group] g... 60 2e-07
ref|XP_002875882.1| hypothetical protein ARALYDRAFT_323420 [Arab... 60 4e-07
ref|XP_006290480.1| hypothetical protein CARUB_v10016554mg [Caps... 59 7e-07
ref|XP_006404288.1| hypothetical protein EUTSA_v10010050mg [Eutr... 59 9e-07
emb|CAB86487.1| ataxia-telangiectasia mutated protein (Atm) [Ara... 58 1e-06
sp|Q9M3G7.1|ATM_ARATH RecName: Full=Serine/threonine-protein kin... 58 1e-06
ref|NP_190402.6| serine/threonine-protein kinase ATM [Arabidopsi... 58 1e-06
ref|XP_003569503.1| PREDICTED: LOW QUALITY PROTEIN: serine/threo... 57 3e-06
ref|XP_006645430.1| PREDICTED: serine/threonine-protein kinase A... 55 1e-05
ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase A... 55 1e-05
>ref|XP_004971592.1| PREDICTED: serine/threonine-protein kinase ATM-like [Setaria
italica]
Length = 2826
Score = 67.0 bits (162), Expect = 2e-09
Identities = 35/83 (42%), Positives = 50/83 (60%)
Frame = -3
Query: 262 DALLWLLRALQGFSSVFLFHGFHHLEERPKNSWFTSNEITNLRNCWQEIWSYLMRGLLVL 83
D++LWLLRAL+ FS V +F+ T +E++ + +CWQ+IW+ L+ L V
Sbjct: 372 DSILWLLRALKEFSMVLMFN-----PREESQFCLTKSEMSIVESCWQDIWNSLIHALPVF 426
Query: 82 SSFSSIIDVTLTLLGNMIERDQV 14
SS + + D L LLG MI RDQV
Sbjct: 427 SSTALVADSALILLGGMIVRDQV 449
>emb|CBI15033.3| unnamed protein product [Vitis vinifera]
Length = 3085
Score = 65.5 bits (158), Expect = 7e-09
Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = -3
Query: 271 NSHDALLWLLRALQGFSSVFLFHGFH-HLEERPKNSWFTSNEITNLRNCWQEIWSYLMRG 95
+++D LLW LR+LQ FSS L + RP FTSNE N W IWS LM G
Sbjct: 434 HAYDGLLWTLRSLQEFSSELLLPVLGAEMLMRPS---FTSNEFDN---GWHTIWSCLMHG 487
Query: 94 LLVLSSFSSIIDVTLTLLGNMIERDQVS 11
L + S+ +S++D L LLGN++ D +S
Sbjct: 488 LPIFSNITSVVDAALVLLGNIVSNDLIS 515
>ref|NP_001041778.1| Os01g0106700 [Oryza sativa Japonica Group]
gi|113531309|dbj|BAF03692.1| Os01g0106700 [Oryza sativa
Japonica Group]
Length = 2905
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/87 (36%), Positives = 51/87 (58%)
Frame = -3
Query: 274 LNSHDALLWLLRALQGFSSVFLFHGFHHLEERPKNSWFTSNEITNLRNCWQEIWSYLMRG 95
L D+LLWL+R L+ FS++ + + P W T++E++ L WQ+ W+ L+
Sbjct: 362 LRFQDSLLWLIRVLKEFSALLMSSA----RDAPP-FWLTNDEMSILEGYWQDTWNSLIHA 416
Query: 94 LLVLSSFSSIIDVTLTLLGNMIERDQV 14
L + S+ + ++D L LLG MI RDQV
Sbjct: 417 LPLFSTTALVVDSVLRLLGEMIMRDQV 443
>ref|XP_002875882.1| hypothetical protein ARALYDRAFT_323420 [Arabidopsis lyrata subsp.
lyrata] gi|297321720|gb|EFH52141.1| hypothetical protein
ARALYDRAFT_323420 [Arabidopsis lyrata subsp. lyrata]
Length = 3832
Score = 59.7 bits (143), Expect = 4e-07
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = -3
Query: 268 SHDALLWLLRALQGFSSVFLFHGFH-HLEERPKNSWFTSNEITNLRNCWQEIWSYLMRGL 92
S+D LLW LR+LQG SS L + + P +S + L WQ IW+ L+RGL
Sbjct: 1223 SYDGLLWTLRSLQGLSSGLLLPDTTMDISKSPASS-------SELDRGWQSIWTSLIRGL 1275
Query: 91 LVLSSFSSIIDVTLTLLGNMIERDQVSV 8
SS S I+D L LLG++I + ++V
Sbjct: 1276 ATFSSMSVIVDAVLVLLGSIISSNHINV 1303
>ref|XP_006290480.1| hypothetical protein CARUB_v10016554mg [Capsella rubella]
gi|482559187|gb|EOA23378.1| hypothetical protein
CARUB_v10016554mg [Capsella rubella]
Length = 3020
Score = 58.9 bits (141), Expect = 7e-07
Identities = 35/88 (39%), Positives = 49/88 (55%)
Frame = -3
Query: 271 NSHDALLWLLRALQGFSSVFLFHGFHHLEERPKNSWFTSNEITNLRNCWQEIWSYLMRGL 92
+S+D LLW LR+LQG SS L L + ++ +S + L WQ IWS L+ GL
Sbjct: 431 HSYDGLLWTLRSLQGLSSGLL------LSDTTQDISKSSISSSELDRGWQLIWSSLIHGL 484
Query: 91 LVLSSFSSIIDVTLTLLGNMIERDQVSV 8
SS S I+D L LLG++I ++V
Sbjct: 485 ATFSSTSVIVDAVLVLLGSVISSHHINV 512
>ref|XP_006404288.1| hypothetical protein EUTSA_v10010050mg [Eutrema salsugineum]
gi|557105407|gb|ESQ45741.1| hypothetical protein
EUTSA_v10010050mg [Eutrema salsugineum]
Length = 3800
Score = 58.5 bits (140), Expect = 9e-07
Identities = 35/87 (40%), Positives = 47/87 (54%)
Frame = -3
Query: 268 SHDALLWLLRALQGFSSVFLFHGFHHLEERPKNSWFTSNEITNLRNCWQEIWSYLMRGLL 89
S+D LLW LR+LQG SS L L + + +S + L WQ IWS L+ GL
Sbjct: 1224 SYDGLLWTLRSLQGLSSSLL------LPDTTMDISKSSVSSSELDRGWQLIWSSLVHGLA 1277
Query: 88 VLSSFSSIIDVTLTLLGNMIERDQVSV 8
SS S I+D L LLG +I + ++V
Sbjct: 1278 TFSSMSEIVDAVLVLLGLIISSNHINV 1304
>emb|CAB86487.1| ataxia-telangiectasia mutated protein (Atm) [Arabidopsis thaliana]
Length = 3856
Score = 57.8 bits (138), Expect = 1e-06
Identities = 34/87 (39%), Positives = 47/87 (54%)
Frame = -3
Query: 268 SHDALLWLLRALQGFSSVFLFHGFHHLEERPKNSWFTSNEITNLRNCWQEIWSYLMRGLL 89
S+D LLW LR+LQG SS L + + +S + L WQ IWS L+ GL
Sbjct: 1245 SYDGLLWTLRSLQGLSSGL------SLPDITMDISKSSASSSELDRGWQSIWSSLIHGLA 1298
Query: 88 VLSSFSSIIDVTLTLLGNMIERDQVSV 8
SS S I+D L LLG++I + ++V
Sbjct: 1299 TFSSMSVIVDAVLVLLGSIISSNHITV 1325
>sp|Q9M3G7.1|ATM_ARATH RecName: Full=Serine/threonine-protein kinase ATM; AltName:
Full=Ataxia telangiectasia mutated homolog; Short=AtATM
gi|7960715|emb|CAB92122.1| AtATM [Arabidopsis thaliana]
Length = 3856
Score = 57.8 bits (138), Expect = 1e-06
Identities = 34/87 (39%), Positives = 47/87 (54%)
Frame = -3
Query: 268 SHDALLWLLRALQGFSSVFLFHGFHHLEERPKNSWFTSNEITNLRNCWQEIWSYLMRGLL 89
S+D LLW LR+LQG SS L + + +S + L WQ IWS L+ GL
Sbjct: 1245 SYDGLLWTLRSLQGLSSGL------SLPDITMDISKSSASSSELDRGWQSIWSSLIHGLA 1298
Query: 88 VLSSFSSIIDVTLTLLGNMIERDQVSV 8
SS S I+D L LLG++I + ++V
Sbjct: 1299 TFSSMSVIVDAVLVLLGSIISSNHITV 1325
>ref|NP_190402.6| serine/threonine-protein kinase ATM [Arabidopsis thaliana]
gi|332644858|gb|AEE78379.1| serine/threonine-protein
kinase ATM [Arabidopsis thaliana]
Length = 3845
Score = 57.8 bits (138), Expect = 1e-06
Identities = 34/87 (39%), Positives = 47/87 (54%)
Frame = -3
Query: 268 SHDALLWLLRALQGFSSVFLFHGFHHLEERPKNSWFTSNEITNLRNCWQEIWSYLMRGLL 89
S+D LLW LR+LQG SS L + + +S + L WQ IWS L+ GL
Sbjct: 1245 SYDGLLWTLRSLQGLSSGL------SLPDITMDISKSSASSSELDRGWQSIWSSLIHGLA 1298
Query: 88 VLSSFSSIIDVTLTLLGNMIERDQVSV 8
SS S I+D L LLG++I + ++V
Sbjct: 1299 TFSSMSVIVDAVLVLLGSIISSNHITV 1325
>ref|XP_003569503.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase
ATM-like [Brachypodium distachyon]
Length = 2841
Score = 57.0 bits (136), Expect = 3e-06
Identities = 31/83 (37%), Positives = 48/83 (57%)
Frame = -3
Query: 262 DALLWLLRALQGFSSVFLFHGFHHLEERPKNSWFTSNEITNLRNCWQEIWSYLMRGLLVL 83
D+LLWL+R+L+ FS+ + + P T E++ + WQ+IW+ L+ L +
Sbjct: 367 DSLLWLIRSLKEFSATLIVNTRDESHFLP-----TKGEMSIVEGYWQDIWNSLIHALPLF 421
Query: 82 SSFSSIIDVTLTLLGNMIERDQV 14
SS + + D L+LLG MI RDQV
Sbjct: 422 SSTALVADSALSLLGGMIMRDQV 444
>ref|XP_006645430.1| PREDICTED: serine/threonine-protein kinase ATM-like [Oryza
brachyantha]
Length = 2845
Score = 55.1 bits (131), Expect = 1e-05
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = -3
Query: 274 LNSHDALLWLLRALQGFSSVFLFHGFHHLEERPKNSWF-TSNEITNLRNCWQEIWSYLMR 98
L D+LLWL+R L+ FS++ + L+ R + + T E++N WQ+ W+ L+
Sbjct: 383 LRFQDSLLWLIRVLKEFSALLV------LDARNETPFLLTKGEMSNFEGYWQDTWNCLIH 436
Query: 97 GLLVLSSFSSIIDVTLTLLGNMIERDQV 14
L + S+ + + D L LL MI RDQV
Sbjct: 437 ALPLFSTTALVADSVLRLLSEMIMRDQV 464
>ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase ATM [Vitis vinifera]
Length = 2956
Score = 55.1 bits (131), Expect = 1e-05
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Frame = -3
Query: 271 NSHDALLWLLRALQGFSSVFLFHGFHHLEERPKNSWFTSNEITN---LRNCWQEIWSYLM 101
+++D LLW LR L G ++L WF S+ T+ N W IWS LM
Sbjct: 374 HAYDGLLWTLRML----------GVYYL-------WFASDMETSRGQFDNGWHTIWSCLM 416
Query: 100 RGLLVLSSFSSIIDVTLTLLGNMIERDQVS 11
GL + S+ +S++D L LLGN++ D +S
Sbjct: 417 HGLPIFSNITSVVDAALVLLGNIVSNDLIS 446