BLASTX nr result

ID: Zingiber23_contig00050877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00050877
         (269 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA38045.1| TPA: hypothetical protein ZEAMMB73_567844 [Zea m...    55   1e-05
ref|XP_002446361.1| hypothetical protein SORBIDRAFT_06g014710 [S...    55   1e-05
ref|XP_002280957.1| PREDICTED: glycyl-tRNA synthetase 1, mitocho...    55   1e-05
emb|CBI15763.3| unnamed protein product [Vitis vinifera]               55   1e-05

>tpg|DAA38045.1| TPA: hypothetical protein ZEAMMB73_567844 [Zea mays]
          Length = 679

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/51 (50%), Positives = 34/51 (66%)
 Frame = -1

Query: 269 RKGDSKEQICVSIDEAASVVKELVDWQSTWSDCMGRYSDHAAAFSPQSNEE 117
           R  DSK+QI V +DE ASVVKE+ D QSTW+D M RY  H A+ + +   +
Sbjct: 628 RDRDSKDQIRVDVDEVASVVKEVTDGQSTWADIMWRYPAHTASAADEDGAQ 678


>ref|XP_002446361.1| hypothetical protein SORBIDRAFT_06g014710 [Sorghum bicolor]
           gi|241937544|gb|EES10689.1| hypothetical protein
           SORBIDRAFT_06g014710 [Sorghum bicolor]
          Length = 684

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/51 (50%), Positives = 34/51 (66%)
 Frame = -1

Query: 269 RKGDSKEQICVSIDEAASVVKELVDWQSTWSDCMGRYSDHAAAFSPQSNEE 117
           R  DSK+QI V +DE ASVVKE+ D QSTW+D M RY  H  + + + + E
Sbjct: 633 RDRDSKDQIRVEVDEVASVVKEVTDGQSTWADIMWRYPAHTTSAADEEDAE 683


>ref|XP_002280957.1| PREDICTED: glycyl-tRNA synthetase 1, mitochondrial-like [Vitis
           vinifera]
          Length = 710

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/43 (58%), Positives = 34/43 (79%)
 Frame = -1

Query: 269 RKGDSKEQICVSIDEAASVVKELVDWQSTWSDCMGRYSDHAAA 141
           R+ DSK+QI VS++E ASVVKE+ D QSTW+D + RY  H++A
Sbjct: 664 RERDSKDQIRVSVEEVASVVKEVTDGQSTWADVLWRYPTHSSA 706


>emb|CBI15763.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/43 (58%), Positives = 34/43 (79%)
 Frame = -1

Query: 269 RKGDSKEQICVSIDEAASVVKELVDWQSTWSDCMGRYSDHAAA 141
           R+ DSK+QI VS++E ASVVKE+ D QSTW+D + RY  H++A
Sbjct: 641 RERDSKDQIRVSVEEVASVVKEVTDGQSTWADVLWRYPTHSSA 683


Top