BLASTX nr result
ID: Zingiber23_contig00050854
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00050854
(281 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002441232.1| hypothetical protein SORBIDRAFT_09g022820 [S... 75 1e-11
gb|EMT02198.1| E3 ubiquitin-protein ligase UPL4 [Aegilops tauschii] 74 3e-11
gb|EMS49276.1| E3 ubiquitin-protein ligase UPL4 [Triticum urartu] 74 3e-11
ref|XP_003566174.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-... 74 3e-11
gb|EEC79365.1| hypothetical protein OsI_20254 [Oryza sativa Indi... 73 3e-11
gb|AFW82268.1| hypothetical protein ZEAMMB73_111992 [Zea mays] 72 8e-11
gb|AFW82267.1| hypothetical protein ZEAMMB73_111992 [Zea mays] 72 8e-11
ref|XP_006655387.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-... 71 2e-10
ref|XP_004246696.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-... 69 8e-10
ref|XP_004306227.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-... 67 3e-09
ref|XP_006480598.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-... 66 4e-09
ref|XP_006428880.1| hypothetical protein CICLE_v10010897mg [Citr... 66 4e-09
ref|XP_006428879.1| hypothetical protein CICLE_v10010897mg [Citr... 66 4e-09
ref|XP_006286912.1| hypothetical protein CARUB_v10000054mg [Caps... 65 1e-08
ref|XP_006286911.1| hypothetical protein CARUB_v10000054mg [Caps... 65 1e-08
ref|XP_006361773.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-... 63 4e-08
ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-... 63 4e-08
emb|CBI32615.3| unnamed protein product [Vitis vinifera] 63 4e-08
ref|NP_195908.1| E3 ubiquitin-protein ligase UPL4 [Arabidopsis t... 63 4e-08
ref|XP_002870997.1| ubiquitin-protein ligase 4 [Arabidopsis lyra... 63 5e-08
>ref|XP_002441232.1| hypothetical protein SORBIDRAFT_09g022820 [Sorghum bicolor]
gi|241946517|gb|EES19662.1| hypothetical protein
SORBIDRAFT_09g022820 [Sorghum bicolor]
Length = 1514
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/70 (48%), Positives = 49/70 (70%)
Frame = -2
Query: 280 FPVLKSQMFKPRDSYTDIPRTRFTKNPCLKVRFVRDKEESNLMDFDKILSVDISCSLVEV 101
FP++ S FKPR S +DIP T PC++VRF +D++E+NL +D ++V+IS SL
Sbjct: 729 FPLIMSHNFKPRSSISDIPTRHSTITPCIRVRFKKDEDETNLSSYDSAVNVEISSSL-HT 787
Query: 100 VEAYLWPKVS 71
+E +LWPKVS
Sbjct: 788 IEEFLWPKVS 797
>gb|EMT02198.1| E3 ubiquitin-protein ligase UPL4 [Aegilops tauschii]
Length = 1402
Score = 73.6 bits (179), Expect = 3e-11
Identities = 37/87 (42%), Positives = 56/87 (64%)
Frame = -2
Query: 280 FPVLKSQMFKPRDSYTDIPRTRFTKNPCLKVRFVRDKEESNLMDFDKILSVDISCSLVEV 101
FPV+ S FKPR++ +DIP T +PC++VRF +D++E+NL +D ++++IS SL
Sbjct: 567 FPVIMSHNFKPRNNISDIPIRHSTISPCIRVRFKKDEDETNLSSYDNSVNLEISSSL-HS 625
Query: 100 VEAYLWPKVSNQHILPTVTVDNHISKP 20
+E +LWPKVS T T D + P
Sbjct: 626 IEQFLWPKVS------TCTSDQNTESP 646
>gb|EMS49276.1| E3 ubiquitin-protein ligase UPL4 [Triticum urartu]
Length = 1323
Score = 73.6 bits (179), Expect = 3e-11
Identities = 37/87 (42%), Positives = 56/87 (64%)
Frame = -2
Query: 280 FPVLKSQMFKPRDSYTDIPRTRFTKNPCLKVRFVRDKEESNLMDFDKILSVDISCSLVEV 101
FPV+ S FKPR++ +DIP T +PC++VRF +D++E+NL +D ++++IS SL
Sbjct: 567 FPVIMSHNFKPRNNISDIPIRHSTISPCIRVRFKKDEDETNLSSYDNSVNLEISSSL-HS 625
Query: 100 VEAYLWPKVSNQHILPTVTVDNHISKP 20
+E +LWPKVS T T D + P
Sbjct: 626 IEQFLWPKVS------TCTSDQNTESP 646
>ref|XP_003566174.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Brachypodium
distachyon]
Length = 1478
Score = 73.6 bits (179), Expect = 3e-11
Identities = 33/70 (47%), Positives = 51/70 (72%)
Frame = -2
Query: 280 FPVLKSQMFKPRDSYTDIPRTRFTKNPCLKVRFVRDKEESNLMDFDKILSVDISCSLVEV 101
FPV+ S FKPR + +DIP T +PC++VRF +D++E+NL +D ++++IS SL +
Sbjct: 713 FPVIMSHNFKPRSNISDIPIRHSTISPCIRVRFKKDEDETNLSSYDNAVNLEISSSL-QS 771
Query: 100 VEAYLWPKVS 71
+E YLWPKV+
Sbjct: 772 IEEYLWPKVT 781
>gb|EEC79365.1| hypothetical protein OsI_20254 [Oryza sativa Indica Group]
Length = 1351
Score = 73.2 bits (178), Expect = 3e-11
Identities = 30/69 (43%), Positives = 51/69 (73%)
Frame = -2
Query: 280 FPVLKSQMFKPRDSYTDIPRTRFTKNPCLKVRFVRDKEESNLMDFDKILSVDISCSLVEV 101
FPV+ S FKPR++ +DIP T PC++VRF +D++++NL +D +++++IS SL+
Sbjct: 595 FPVIMSHNFKPRNNISDIPTRHSTITPCIRVRFKKDEDQTNLSSYDNVVNLEIS-SLLHT 653
Query: 100 VEAYLWPKV 74
+E +LWPK+
Sbjct: 654 IEEFLWPKI 662
>gb|AFW82268.1| hypothetical protein ZEAMMB73_111992 [Zea mays]
Length = 1042
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/70 (47%), Positives = 48/70 (68%)
Frame = -2
Query: 280 FPVLKSQMFKPRDSYTDIPRTRFTKNPCLKVRFVRDKEESNLMDFDKILSVDISCSLVEV 101
FPV+ S FKPR S DIP T PC++VRF +D++E+ L ++ ++V+IS SL +
Sbjct: 426 FPVIMSHNFKPRSSIADIPTRHSTITPCIRVRFKKDEDETKLSSYNSAVNVEISSSL-QT 484
Query: 100 VEAYLWPKVS 71
+E +LWPKVS
Sbjct: 485 IEEFLWPKVS 494
>gb|AFW82267.1| hypothetical protein ZEAMMB73_111992 [Zea mays]
Length = 1210
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/70 (47%), Positives = 48/70 (68%)
Frame = -2
Query: 280 FPVLKSQMFKPRDSYTDIPRTRFTKNPCLKVRFVRDKEESNLMDFDKILSVDISCSLVEV 101
FPV+ S FKPR S DIP T PC++VRF +D++E+ L ++ ++V+IS SL +
Sbjct: 426 FPVIMSHNFKPRSSIADIPTRHSTITPCIRVRFKKDEDETKLSSYNSAVNVEISSSL-QT 484
Query: 100 VEAYLWPKVS 71
+E +LWPKVS
Sbjct: 485 IEEFLWPKVS 494
>ref|XP_006655387.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Oryza
brachyantha]
Length = 1541
Score = 70.9 bits (172), Expect = 2e-10
Identities = 30/69 (43%), Positives = 50/69 (72%)
Frame = -2
Query: 280 FPVLKSQMFKPRDSYTDIPRTRFTKNPCLKVRFVRDKEESNLMDFDKILSVDISCSLVEV 101
FPV+ S FKPR++ +DIP T PC++VRF +D+++ NL +++ +++V+IS SL
Sbjct: 766 FPVIMSHNFKPRNTISDIPTRHSTITPCIRVRFKKDEDQINLSNYNNVVNVEISSSL-HT 824
Query: 100 VEAYLWPKV 74
+E +LWPK+
Sbjct: 825 IEEFLWPKI 833
>ref|XP_004246696.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Solanum
lycopersicum]
Length = 1553
Score = 68.6 bits (166), Expect = 8e-10
Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = -2
Query: 280 FPVLKSQMFKPRDSYTDIPRTRFTKNPCLKVRFVRDKEESNLMDF-DKILSVDISCSLVE 104
FPV+ S K R+SY IP T PCLKV+FV+ + ES+L+D+ + ++SVD SL+E
Sbjct: 738 FPVILSHASKLRNSYATIPYEHCTPYPCLKVQFVKGEGESSLVDYPESVVSVD-PFSLLE 796
Query: 103 VVEAYLWPKVSNQ 65
+E YLWPKVS +
Sbjct: 797 TIEGYLWPKVSKK 809
>ref|XP_004306227.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Fragaria vesca
subsp. vesca]
Length = 1567
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/70 (45%), Positives = 45/70 (64%)
Frame = -2
Query: 280 FPVLKSQMFKPRDSYTDIPRTRFTKNPCLKVRFVRDKEESNLMDFDKILSVDISCSLVEV 101
FPV+ S + K R+SY +P R T PC++VRFVRDKEE++L D + S ++
Sbjct: 755 FPVILSHIPKQRNSYATVPYERHTAYPCMRVRFVRDKEETSLGDCSEDAFTVDPFSSLDA 814
Query: 100 VEAYLWPKVS 71
+E YLWPKV+
Sbjct: 815 IEGYLWPKVN 824
>ref|XP_006480598.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like isoform X1 [Citrus
sinensis] gi|568853949|ref|XP_006480599.1| PREDICTED: E3
ubiquitin-protein ligase UPL4-like isoform X2 [Citrus
sinensis]
Length = 1523
Score = 66.2 bits (160), Expect = 4e-09
Identities = 36/71 (50%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Frame = -2
Query: 280 FPVLKSQMFKPRDSYTDIPRTRFTKNPCLKVRFVRDKEESNLMDFDK-ILSVDISCSLVE 104
FPV+ S FK R SY +P R +PCL+VRFVR E+ L DF + +L+VD SL E
Sbjct: 749 FPVILSHSFKLRSSYATVPYGRCISHPCLRVRFVRGDGETCLSDFSEDLLTVDPFSSL-E 807
Query: 103 VVEAYLWPKVS 71
+E YLWPKV+
Sbjct: 808 AIEGYLWPKVT 818
>ref|XP_006428880.1| hypothetical protein CICLE_v10010897mg [Citrus clementina]
gi|567872583|ref|XP_006428881.1| hypothetical protein
CICLE_v10010897mg [Citrus clementina]
gi|557530937|gb|ESR42120.1| hypothetical protein
CICLE_v10010897mg [Citrus clementina]
gi|557530938|gb|ESR42121.1| hypothetical protein
CICLE_v10010897mg [Citrus clementina]
Length = 1523
Score = 66.2 bits (160), Expect = 4e-09
Identities = 36/71 (50%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Frame = -2
Query: 280 FPVLKSQMFKPRDSYTDIPRTRFTKNPCLKVRFVRDKEESNLMDFDK-ILSVDISCSLVE 104
FPV+ S FK R SY +P R +PCL+VRFVR E+ L DF + +L+VD SL E
Sbjct: 749 FPVILSHSFKLRSSYATVPYGRCISHPCLRVRFVRGDGETCLSDFSEDLLTVDPFSSL-E 807
Query: 103 VVEAYLWPKVS 71
+E YLWPKV+
Sbjct: 808 AIEGYLWPKVT 818
>ref|XP_006428879.1| hypothetical protein CICLE_v10010897mg [Citrus clementina]
gi|557530936|gb|ESR42119.1| hypothetical protein
CICLE_v10010897mg [Citrus clementina]
Length = 1463
Score = 66.2 bits (160), Expect = 4e-09
Identities = 36/71 (50%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Frame = -2
Query: 280 FPVLKSQMFKPRDSYTDIPRTRFTKNPCLKVRFVRDKEESNLMDFDK-ILSVDISCSLVE 104
FPV+ S FK R SY +P R +PCL+VRFVR E+ L DF + +L+VD SL E
Sbjct: 749 FPVILSHSFKLRSSYATVPYGRCISHPCLRVRFVRGDGETCLSDFSEDLLTVDPFSSL-E 807
Query: 103 VVEAYLWPKVS 71
+E YLWPKV+
Sbjct: 808 AIEGYLWPKVT 818
>ref|XP_006286912.1| hypothetical protein CARUB_v10000054mg [Capsella rubella]
gi|482555618|gb|EOA19810.1| hypothetical protein
CARUB_v10000054mg [Capsella rubella]
Length = 1274
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Frame = -2
Query: 280 FPVLKSQMFKPRDSYTDIPRTRFTKNPCLKVRFVRDKEESNLMDFDK-ILSVDISCSLVE 104
FP++ SQ K R+S+ IP R T PCL+VRF++ +EE++L D+ + ++VD C L +
Sbjct: 503 FPIVLSQFLKQRNSFAAIPNGRCTSYPCLRVRFLKAEEETSLRDYSQDFVTVDPLCCL-D 561
Query: 103 VVEAYLWPKVSNQHI 59
V Y+WPKV+ + I
Sbjct: 562 AVNQYMWPKVNLEPI 576
>ref|XP_006286911.1| hypothetical protein CARUB_v10000054mg [Capsella rubella]
gi|482555617|gb|EOA19809.1| hypothetical protein
CARUB_v10000054mg [Capsella rubella]
Length = 1181
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Frame = -2
Query: 280 FPVLKSQMFKPRDSYTDIPRTRFTKNPCLKVRFVRDKEESNLMDFDK-ILSVDISCSLVE 104
FP++ SQ K R+S+ IP R T PCL+VRF++ +EE++L D+ + ++VD C L +
Sbjct: 503 FPIVLSQFLKQRNSFAAIPNGRCTSYPCLRVRFLKAEEETSLRDYSQDFVTVDPLCCL-D 561
Query: 103 VVEAYLWPKVSNQHI 59
V Y+WPKV+ + I
Sbjct: 562 AVNQYMWPKVNLEPI 576
>ref|XP_006361773.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Solanum
tuberosum]
Length = 1554
Score = 63.2 bits (152), Expect = 4e-08
Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = -2
Query: 280 FPVLKSQMFKPRDSYTDIPRTRFTKNPCLKVRFVRDKEESNLMDF-DKILSVDISCSLVE 104
FPV+ S K R+SY IP T PCLKV+FV+ + ES+L+D+ + +++VD SL+E
Sbjct: 740 FPVI-SHASKLRNSYATIPYGHCTPYPCLKVQFVKGEGESSLVDYPESVVNVD-PFSLLE 797
Query: 103 VVEAYLWPKVSNQ 65
+E YLWPKVS +
Sbjct: 798 TIEGYLWPKVSRK 810
>ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Vitis vinifera]
Length = 1575
Score = 63.2 bits (152), Expect = 4e-08
Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = -2
Query: 280 FPVLKSQMFKPRDSYTDIPRTRFTKNPCLKVRFVRDKEESNLMDF-DKILSVDISCSLVE 104
FPV+ S K R+S+ +P R +PCLKVRF +++ E++L D+ + +L+VD SL +
Sbjct: 762 FPVILSHASKQRNSFATVPNGRCVSHPCLKVRFTKEEVETSLYDYSEDVLTVDPFSSL-D 820
Query: 103 VVEAYLWPKVSNQHILPTVTV 41
+E +LW KVS + PT +V
Sbjct: 821 AIEGFLWRKVSIKRTEPTNSV 841
>emb|CBI32615.3| unnamed protein product [Vitis vinifera]
Length = 1487
Score = 63.2 bits (152), Expect = 4e-08
Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = -2
Query: 280 FPVLKSQMFKPRDSYTDIPRTRFTKNPCLKVRFVRDKEESNLMDF-DKILSVDISCSLVE 104
FPV+ S K R+S+ +P R +PCLKVRF +++ E++L D+ + +L+VD SL +
Sbjct: 762 FPVILSHASKQRNSFATVPNGRCVSHPCLKVRFTKEEVETSLYDYSEDVLTVDPFSSL-D 820
Query: 103 VVEAYLWPKVSNQHILPTVTV 41
+E +LW KVS + PT +V
Sbjct: 821 AIEGFLWRKVSIKRTEPTNSV 841
>ref|NP_195908.1| E3 ubiquitin-protein ligase UPL4 [Arabidopsis thaliana]
gi|75181166|sp|Q9LYZ7.1|UPL4_ARATH RecName: Full=E3
ubiquitin-protein ligase UPL4; Short=Ubiquitin-protein
ligase 4 gi|7413563|emb|CAB86042.1| putative protein
[Arabidopsis thaliana] gi|332003148|gb|AED90531.1| E3
ubiquitin-protein ligase UPL4 [Arabidopsis thaliana]
Length = 1502
Score = 63.2 bits (152), Expect = 4e-08
Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Frame = -2
Query: 280 FPVLKSQMFKPRDSYTDIPRTRFTKNPCLKVRFVRDKEESNLMDFDK-ILSVDISCSLVE 104
FP++ SQ K ++S+ IP R T PCLKVRF++ + E++L D+ + ++VD C L +
Sbjct: 736 FPIVLSQFLKQKNSFAAIPNGRCTSYPCLKVRFLKAEGETSLRDYSQDFVTVDPLCYL-D 794
Query: 103 VVEAYLWPKVSNQHI 59
V+ YLWPKV+ + I
Sbjct: 795 AVDQYLWPKVNIEPI 809
>ref|XP_002870997.1| ubiquitin-protein ligase 4 [Arabidopsis lyrata subsp. lyrata]
gi|297316834|gb|EFH47256.1| ubiquitin-protein ligase 4
[Arabidopsis lyrata subsp. lyrata]
Length = 1509
Score = 62.8 bits (151), Expect = 5e-08
Identities = 31/71 (43%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Frame = -2
Query: 280 FPVLKSQMFKPRDSYTDIPRTRFTKNPCLKVRFVRDKEESNLMDFDK-ILSVDISCSLVE 104
FP++ SQ K ++S+ IP R T PCLKVRF++ + E++L D+ + ++VD C L +
Sbjct: 737 FPIVLSQFLKQKNSFAAIPNGRCTSYPCLKVRFLKAEGETSLRDYSQDFVTVDPLCYL-D 795
Query: 103 VVEAYLWPKVS 71
V+ YLWPKV+
Sbjct: 796 AVDQYLWPKVN 806