BLASTX nr result

ID: Zingiber23_contig00050832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00050832
         (310 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY06960.1| Uncharacterized protein TCM_021522 [Theobroma cacao]    43   7e-06

>gb|EOY06960.1| Uncharacterized protein TCM_021522 [Theobroma cacao]
          Length = 3503

 Score = 43.1 bits (100), Expect(2) = 7e-06
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +2

Query: 98   PVIVPLRWNASPCWRRLIKVRSIAEKQIGWIIGKDKLKFWFDTWL 232
            P  V  + + S  W+R++ + SI E+ I W +G  KL FW D W+
Sbjct: 3028 PTHVQPKLHDSQTWKRMVTISSITEQNIRWRVGHGKLFFWHDCWM 3072



 Score = 32.0 bits (71), Expect(2) = 7e-06
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 15   AMKLWHRFREKKTPWAGFLNRLYCG 89
            +MKLW RFR   + W  F+   YCG
Sbjct: 3000 SMKLWWRFRTTNSLWMQFMRAKYCG 3024


Top