BLASTX nr result
ID: Zingiber23_contig00050794
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00050794
(514 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004973815.1| PREDICTED: pentatricopeptide repeat-containi... 103 3e-20
ref|XP_003574702.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
ref|NP_001169447.1| uncharacterized protein LOC100383318 [Zea ma... 99 4e-19
ref|XP_002445939.1| hypothetical protein SORBIDRAFT_07g028400 [S... 97 2e-18
emb|CAJ75625.1| pentatricopeptide repeat-containing protein [Bra... 96 4e-18
ref|NP_001062150.1| Os08g0499800 [Oryza sativa Japonica Group] g... 96 5e-18
ref|XP_006659545.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
gb|AFW69389.1| hypothetical protein ZEAMMB73_912579 [Zea mays] 80 3e-13
gb|AFW69388.1| hypothetical protein ZEAMMB73_912579 [Zea mays] 80 3e-13
gb|EAZ43226.1| hypothetical protein OsJ_27826 [Oryza sativa Japo... 71 1e-10
ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containi... 69 5e-10
gb|EXB67315.1| hypothetical protein L484_025797 [Morus notabilis] 69 6e-10
gb|AAD55488.1|AC009322_28 Hypothetical protein [Arabidopsis thal... 69 8e-10
ref|NP_178132.1| pentatricopeptide repeat-containing protein [Ar... 69 8e-10
dbj|BAC43646.1| unknown protein [Arabidopsis thaliana] gi|289509... 69 8e-10
ref|XP_006302357.1| hypothetical protein CARUB_v10020417mg [Caps... 67 2e-09
ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
ref|XP_002889307.1| pentatricopeptide repeat-containing protein ... 67 2e-09
emb|CBI36299.3| unnamed protein product [Vitis vinifera] 67 2e-09
ref|XP_006389760.1| hypothetical protein EUTSA_v10018671mg [Eutr... 67 3e-09
>ref|XP_004973815.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Setaria italica]
Length = 457
Score = 103 bits (256), Expect = 3e-20
Identities = 56/128 (43%), Positives = 80/128 (62%), Gaps = 5/128 (3%)
Frame = +2
Query: 146 MLSLRTVRRICAAIDAASVTCIVAGLSKLRK-RSDFSVCAGESGCPDDFPTISACKAAVL 322
MLSL +R++CAA DA ++T I AGLS+ R FS S P DFPTI+AC+AAV
Sbjct: 1 MLSLGAIRKLCAAFDAVALTVIAAGLSRPPSGRHPFSSAHAHSPYPADFPTIAACRAAVS 60
Query: 323 ----NNRPRPKPRLEKETSSTRNCQGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLV 490
++R + R + S+ + +P L ++K E+DPE+L+ LF++NA NRL+
Sbjct: 61 ASKGSSRSSSRRRQPSPSPSSSPAAAAKEEEQPVLVRIKHERDPERLYELFRANAHNRLL 120
Query: 491 IENRFAFE 514
+ENRFAFE
Sbjct: 121 VENRFAFE 128
>ref|XP_003574702.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Brachypodium distachyon]
Length = 448
Score = 100 bits (249), Expect = 2e-19
Identities = 53/123 (43%), Positives = 82/123 (66%)
Frame = +2
Query: 146 MLSLRTVRRICAAIDAASVTCIVAGLSKLRKRSDFSVCAGESGCPDDFPTISACKAAVLN 325
MLSL +R++CAA DA ++T I AGLS R R FS A + P DFPTI++C+AAV+
Sbjct: 1 MLSLGAIRKLCAAFDAVALTVIAAGLSHPRSRP-FSARAHST--PHDFPTIASCRAAVVR 57
Query: 326 NRPRPKPRLEKETSSTRNCQGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRF 505
++ + + R + + +G + P L ++K E+DP++L+ LF++NA NRL++ENRF
Sbjct: 58 SKNQRR-RAPNDAPAAAEDKGSTDSETPLLVRIKHERDPKRLYELFRANAHNRLLVENRF 116
Query: 506 AFE 514
AF+
Sbjct: 117 AFQ 119
>ref|NP_001169447.1| uncharacterized protein LOC100383318 [Zea mays]
gi|224029437|gb|ACN33794.1| unknown [Zea mays]
gi|414869277|tpg|DAA47834.1| TPA: hypothetical protein
ZEAMMB73_389575 [Zea mays]
Length = 459
Score = 99.4 bits (246), Expect = 4e-19
Identities = 56/130 (43%), Positives = 82/130 (63%), Gaps = 7/130 (5%)
Frame = +2
Query: 146 MLSLRTVRRICAAIDAASVTCIVAGLSKLRK-RSDFSVCAGESGCPDDFPTISACKAAVL 322
MLSL +R++CAA DA ++T I AGLS+ R FS S P DFPTI+AC+AA+
Sbjct: 1 MLSLGALRKLCAAFDAVALTVIAAGLSRPPSGRHPFSSAHAHSSHPADFPTIAACRAAIS 60
Query: 323 NNRP--RPKPRLEKETSSTRNCQGPL----QNSEPALFKLKKEKDPEKLFHLFKSNATNR 484
++ R +P + + +SS + +P L ++K E+DPE+L+ LF++NA NR
Sbjct: 61 ASKGDRRRRPGVGQPSSSPSPSLAAAAAKEEQEQPVLVRIKHERDPERLYQLFRANAHNR 120
Query: 485 LVIENRFAFE 514
L++ENRFAFE
Sbjct: 121 LLVENRFAFE 130
>ref|XP_002445939.1| hypothetical protein SORBIDRAFT_07g028400 [Sorghum bicolor]
gi|241942289|gb|EES15434.1| hypothetical protein
SORBIDRAFT_07g028400 [Sorghum bicolor]
Length = 465
Score = 97.4 bits (241), Expect = 2e-18
Identities = 58/136 (42%), Positives = 79/136 (58%), Gaps = 13/136 (9%)
Frame = +2
Query: 146 MLSLRTVRRICAAIDAASVTCIVAGLSKLRK-RSDFSVCAGESGCPDDFPTISACKAAVL 322
MLSL + ++CAA DA ++T I AGLS+ R FS S P DFPTI+AC+AAV
Sbjct: 1 MLSLGALHKLCAAFDAVALTVIAAGLSRPPSGRHPFSSAHAHSPHPVDFPTIAACRAAVS 60
Query: 323 --------NNRP---RPKPRLEKETSSTRN-CQGPLQNSEPALFKLKKEKDPEKLFHLFK 466
RP +P P ++ + Q +P L K+K E+DPE+L+ LF+
Sbjct: 61 ASKGDRRRRRRPGGGQPSPSSSPAAAAAEEKAEEEQQQQQPVLVKIKHERDPERLYQLFR 120
Query: 467 SNATNRLVIENRFAFE 514
+NA NRL++ENRFAFE
Sbjct: 121 TNAHNRLLVENRFAFE 136
>emb|CAJ75625.1| pentatricopeptide repeat-containing protein [Brachypodium
sylvaticum]
Length = 289
Score = 96.3 bits (238), Expect = 4e-18
Identities = 55/126 (43%), Positives = 81/126 (64%), Gaps = 3/126 (2%)
Frame = +2
Query: 146 MLSLRTVRRICAAIDAASVTCIVAGLSKLRKRSDFSVCAGESGCPDDFPTISACKAAVL- 322
MLSL +R++CAA DA ++T I AGLS R R FS A + P DFPTI++C+AAV
Sbjct: 1 MLSLGAIRKLCAAFDAVALTVIAAGLSHPRSRP-FSTRAHST--PPDFPTIASCRAAVAR 57
Query: 323 --NNRPRPKPRLEKETSSTRNCQGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIE 496
N+R RP + + +G + P L ++K E++P++L+ LF++NA NRL++E
Sbjct: 58 SKNHRRRPP-----DAPAGAEDKGSRDSETPLLVRIKNERNPKRLYELFRANAHNRLLVE 112
Query: 497 NRFAFE 514
NRFAF+
Sbjct: 113 NRFAFQ 118
>ref|NP_001062150.1| Os08g0499800 [Oryza sativa Japonica Group]
gi|42407346|dbj|BAD08807.1| putative drought-inducible
protein 1OS [Oryza sativa Japonica Group]
gi|113624119|dbj|BAF24064.1| Os08g0499800 [Oryza sativa
Japonica Group] gi|125562056|gb|EAZ07504.1| hypothetical
protein OsI_29761 [Oryza sativa Indica Group]
gi|215716978|dbj|BAG95341.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 443
Score = 95.9 bits (237), Expect = 5e-18
Identities = 55/123 (44%), Positives = 78/123 (63%)
Frame = +2
Query: 146 MLSLRTVRRICAAIDAASVTCIVAGLSKLRKRSDFSVCAGESGCPDDFPTISACKAAVLN 325
MLSL +R++CAA DA ++T I AGLS+ FS A S DFPTI++C+AAV +
Sbjct: 1 MLSLGAIRKLCAAFDAIALTVIAAGLSRT-SHHPFSAHAHYS--QPDFPTIASCRAAVAS 57
Query: 326 NRPRPKPRLEKETSSTRNCQGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRF 505
++ R + S+T+ G P L ++K E+DP +L+ LF++NA NRL+IENRF
Sbjct: 58 SKWR-----RRHPSTTKESAGVEPAEPPVLVRIKNERDPVRLYELFRANAHNRLLIENRF 112
Query: 506 AFE 514
AFE
Sbjct: 113 AFE 115
>ref|XP_006659545.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Oryza brachyantha]
Length = 446
Score = 90.9 bits (224), Expect = 2e-16
Identities = 56/124 (45%), Positives = 78/124 (62%), Gaps = 1/124 (0%)
Frame = +2
Query: 146 MLSLRTVRRICAAIDAASVTCIVAGLSKLRKRSDFSVCAGESGCPDDFPTISACKAAVLN 325
MLSL +R++CAA DA ++T I AGLS+ +SV A S DFPTI++C+AAV +
Sbjct: 1 MLSLGAIRKLCAAFDAVALTVIAAGLSR-SSHHPYSVYAHSS--QPDFPTIASCRAAVAS 57
Query: 326 NRPRPKPRLEKETSSTRNCQGPLQNSEPA-LFKLKKEKDPEKLFHLFKSNATNRLVIENR 502
++ R R + T++ EP+ L K+K E+DP +L+ L K NA NRL+IENR
Sbjct: 58 SKWR---RRQPSTAAAAPAAKGSAGVEPSVLMKIKDERDPVRLYELVKVNAHNRLLIENR 114
Query: 503 FAFE 514
FAFE
Sbjct: 115 FAFE 118
>gb|AFW69389.1| hypothetical protein ZEAMMB73_912579 [Zea mays]
Length = 590
Score = 80.1 bits (196), Expect = 3e-13
Identities = 48/120 (40%), Positives = 71/120 (59%), Gaps = 11/120 (9%)
Frame = +2
Query: 188 DAASVTC----IVAGLSKLRK-RSDFSVCAGESGCPDDFPTISACKAAVLNNRP--RPKP 346
DA + C I AGLS+ R FS +S P DFPTI+AC+AA+ ++ R +P
Sbjct: 97 DATAAICPPAVIAAGLSRPPSGRHPFSSAHAQSSHPVDFPTIAACRAAISASKGDRRRRP 156
Query: 347 RLEKETSSTR----NCQGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRFAFE 514
+ + +SS + +P L ++K E+DPE+L+ LF++NA NRL++ENRFAFE
Sbjct: 157 GVGQHSSSPSPSLATAAAKEEQEQPVLVRIKHERDPERLYQLFRANAHNRLLVENRFAFE 216
>gb|AFW69388.1| hypothetical protein ZEAMMB73_912579 [Zea mays]
Length = 529
Score = 80.1 bits (196), Expect = 3e-13
Identities = 48/120 (40%), Positives = 71/120 (59%), Gaps = 11/120 (9%)
Frame = +2
Query: 188 DAASVTC----IVAGLSKLRK-RSDFSVCAGESGCPDDFPTISACKAAVLNNRP--RPKP 346
DA + C I AGLS+ R FS +S P DFPTI+AC+AA+ ++ R +P
Sbjct: 97 DATAAICPPAVIAAGLSRPPSGRHPFSSAHAQSSHPVDFPTIAACRAAISASKGDRRRRP 156
Query: 347 RLEKETSSTR----NCQGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRFAFE 514
+ + +SS + +P L ++K E+DPE+L+ LF++NA NRL++ENRFAFE
Sbjct: 157 GVGQHSSSPSPSLATAAAKEEQEQPVLVRIKHERDPERLYQLFRANAHNRLLVENRFAFE 216
>gb|EAZ43226.1| hypothetical protein OsJ_27826 [Oryza sativa Japonica Group]
Length = 515
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/77 (45%), Positives = 52/77 (67%)
Frame = +2
Query: 284 DFPTISACKAAVLNNRPRPKPRLEKETSSTRNCQGPLQNSEPALFKLKKEKDPEKLFHLF 463
DFPTI++C+AAV +++ R + S+T+ G P L ++K E+DP +L+ LF
Sbjct: 116 DFPTIASCRAAVASSKWR-----RRHPSTTKESAGVEPAEPPVLVRIKNERDPVRLYELF 170
Query: 464 KSNATNRLVIENRFAFE 514
++NA NRL+IENRFAFE
Sbjct: 171 RANAHNRLLIENRFAFE 187
>ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Cucumis sativus]
gi|449484169|ref|XP_004156805.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Cucumis sativus]
Length = 399
Score = 69.3 bits (168), Expect = 5e-10
Identities = 37/55 (67%), Positives = 41/55 (74%), Gaps = 4/55 (7%)
Frame = +2
Query: 362 TSSTRNCQGPLQNS----EPALFKLKKEKDPEKLFHLFKSNATNRLVIENRFAFE 514
T +T +QNS EPAL KLK E+DPEKLFHLFK+NA NRLVIENRFAFE
Sbjct: 20 TDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKANAHNRLVIENRFAFE 74
>gb|EXB67315.1| hypothetical protein L484_025797 [Morus notabilis]
Length = 403
Score = 68.9 bits (167), Expect = 6e-10
Identities = 46/123 (37%), Positives = 56/123 (45%)
Frame = +2
Query: 146 MLSLRTVRRICAAIDAASVTCIVAGLSKLRKRSDFSVCAGESGCPDDFPTISACKAAVLN 325
MLSLR +RR C A AS + + C +AV N
Sbjct: 1 MLSLRPIRRFCHAAAPASASA----------------------------ALKDCSSAVSN 32
Query: 326 NRPRPKPRLEKETSSTRNCQGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRF 505
PK + EPAL KLK E+DP+KLFHLFK+NA NR+V+ENRF
Sbjct: 33 KVFNPK-----------------ELEEPALVKLKAERDPDKLFHLFKANAHNRIVVENRF 75
Query: 506 AFE 514
AFE
Sbjct: 76 AFE 78
>gb|AAD55488.1|AC009322_28 Hypothetical protein [Arabidopsis thaliana]
Length = 419
Score = 68.6 bits (166), Expect = 8e-10
Identities = 33/51 (64%), Positives = 40/51 (78%)
Frame = +2
Query: 362 TSSTRNCQGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRFAFE 514
++ + QG EPAL KLK E+DPEKL++LFK+NATNRLVIENRFAFE
Sbjct: 25 STESNQIQGLKPLEEPALVKLKSERDPEKLYNLFKANATNRLVIENRFAFE 75
>ref|NP_178132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806404|sp|Q8GW57.2|PP134_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g80150, mitochondrial; Flags: Precursor
gi|332198242|gb|AEE36363.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 397
Score = 68.6 bits (166), Expect = 8e-10
Identities = 33/51 (64%), Positives = 40/51 (78%)
Frame = +2
Query: 362 TSSTRNCQGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRFAFE 514
++ + QG EPAL KLK E+DPEKL++LFK+NATNRLVIENRFAFE
Sbjct: 25 STESNQIQGLKPLEEPALVKLKSERDPEKLYNLFKANATNRLVIENRFAFE 75
>dbj|BAC43646.1| unknown protein [Arabidopsis thaliana] gi|28950987|gb|AAO63417.1|
At1g80150 [Arabidopsis thaliana]
Length = 397
Score = 68.6 bits (166), Expect = 8e-10
Identities = 33/51 (64%), Positives = 40/51 (78%)
Frame = +2
Query: 362 TSSTRNCQGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRFAFE 514
++ + QG EPAL KLK E+DPEKL++LFK+NATNRLVIENRFAFE
Sbjct: 25 STESNQIQGLKPLEEPALVKLKSERDPEKLYNLFKANATNRLVIENRFAFE 75
>ref|XP_006302357.1| hypothetical protein CARUB_v10020417mg [Capsella rubella]
gi|482571067|gb|EOA35255.1| hypothetical protein
CARUB_v10020417mg [Capsella rubella]
Length = 397
Score = 67.4 bits (163), Expect = 2e-09
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +2
Query: 365 SSTRNCQGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRFAFE 514
SS N PL+ EPAL KLK E+DPEKLF LF++NATNRLVIENRFAFE
Sbjct: 28 SSESNQIQPLE--EPALVKLKSERDPEKLFKLFQANATNRLVIENRFAFE 75
>ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Vitis vinifera]
Length = 405
Score = 67.4 bits (163), Expect = 2e-09
Identities = 37/61 (60%), Positives = 43/61 (70%), Gaps = 4/61 (6%)
Frame = +2
Query: 344 PRLEKETSSTRNC----QGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRFAF 511
P E TS+ NC PL+ EPAL KLK E+DPE+LF LFK+NA NRLV+ENRFAF
Sbjct: 21 PVAETVTSAKSNCIKKPDKPLE--EPALVKLKAERDPERLFQLFKANAHNRLVVENRFAF 78
Query: 512 E 514
E
Sbjct: 79 E 79
>ref|XP_002889307.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297335148|gb|EFH65566.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 397
Score = 67.4 bits (163), Expect = 2e-09
Identities = 33/51 (64%), Positives = 39/51 (76%)
Frame = +2
Query: 362 TSSTRNCQGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRFAFE 514
++ + QG EPAL KLK E+DPEKLF LF++NATNRLVIENRFAFE
Sbjct: 25 STDSNQIQGLKPLEEPALVKLKSERDPEKLFKLFQANATNRLVIENRFAFE 75
>emb|CBI36299.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 67.4 bits (163), Expect = 2e-09
Identities = 37/61 (60%), Positives = 43/61 (70%), Gaps = 4/61 (6%)
Frame = +2
Query: 344 PRLEKETSSTRNC----QGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRFAF 511
P E TS+ NC PL+ EPAL KLK E+DPE+LF LFK+NA NRLV+ENRFAF
Sbjct: 21 PVAETVTSAKSNCIKKPDKPLE--EPALVKLKAERDPERLFQLFKANAHNRLVVENRFAF 78
Query: 512 E 514
E
Sbjct: 79 E 79
>ref|XP_006389760.1| hypothetical protein EUTSA_v10018671mg [Eutrema salsugineum]
gi|557086194|gb|ESQ27046.1| hypothetical protein
EUTSA_v10018671mg [Eutrema salsugineum]
Length = 397
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/44 (75%), Positives = 36/44 (81%)
Frame = +2
Query: 383 QGPLQNSEPALFKLKKEKDPEKLFHLFKSNATNRLVIENRFAFE 514
QG EPAL KLK E+DPEKLF LFK+NATN+LVIENRFAFE
Sbjct: 32 QGLKPLEEPALVKLKSERDPEKLFKLFKANATNQLVIENRFAFE 75