BLASTX nr result
ID: Zingiber23_contig00050778
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00050778
(283 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006344334.1| PREDICTED: uncharacterized protein LOC102589... 79 8e-13
gb|EMJ21055.1| hypothetical protein PRUPE_ppa027217mg, partial [... 77 2e-12
ref|NP_001051678.1| Os03g0812200 [Oryza sativa Japonica Group] g... 77 2e-12
ref|XP_004237213.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 77 3e-12
ref|XP_006349597.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 76 4e-12
ref|XP_002303979.2| zinc finger family protein [Populus trichoca... 75 7e-12
ref|NP_564693.1| RING/U-box domain-containing protein [Arabidops... 75 9e-12
ref|XP_006650785.1| PREDICTED: E3 ubiquitin-protein ligase RNF12... 75 1e-11
ref|XP_006401344.1| hypothetical protein EUTSA_v10013831mg [Eutr... 75 1e-11
ref|XP_006392629.1| hypothetical protein EUTSA_v10012351mg, part... 75 1e-11
ref|NP_200445.1| protein ATCRT1 [Arabidopsis thaliana] gi|101778... 75 1e-11
ref|XP_002523395.1| zinc finger protein, putative [Ricinus commu... 75 1e-11
ref|XP_006305221.1| hypothetical protein CARUB_v10009589mg [Caps... 74 2e-11
ref|XP_002882822.1| zinc finger family protein [Arabidopsis lyra... 74 2e-11
ref|NP_001147077.1| RING finger protein 126 [Zea mays] gi|195607... 74 2e-11
ref|XP_004294935.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 74 2e-11
gb|ACG42033.1| RHC1A [Zea mays] 74 2e-11
ref|NP_001144032.1| uncharacterized protein LOC100276856 [Zea ma... 74 2e-11
ref|NP_001182786.1| RHC1A [Zea mays] gi|195612900|gb|ACG28280.1|... 74 2e-11
ref|NP_001140503.1| uncharacterized LOC100272564 [Zea mays] gi|1... 74 2e-11
>ref|XP_006344334.1| PREDICTED: uncharacterized protein LOC102589851 [Solanum tuberosum]
Length = 264
Score = 78.6 bits (192), Expect = 8e-13
Identities = 35/69 (50%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Frame = +2
Query: 83 GSSPASAAAVEGLKMVTAEEPNI---CSICLEDFGMATPVLAMPCSHLFHAACLKKWLEQ 253
G PAS +++E L+ + A+E N CS+CL++ G T VL +PCSH+FHA C+ KWL+
Sbjct: 191 GMVPASESSIELLEPMEADERNSNDECSVCLDELGEETDVLRLPCSHMFHAECITKWLQN 250
Query: 254 SCSCPLCRF 280
S CPLCRF
Sbjct: 251 SHYCPLCRF 259
>gb|EMJ21055.1| hypothetical protein PRUPE_ppa027217mg, partial [Prunus persica]
Length = 231
Score = 77.4 bits (189), Expect = 2e-12
Identities = 30/64 (46%), Positives = 44/64 (68%)
Frame = +2
Query: 92 PASAAAVEGLKMVTAEEPNICSICLEDFGMATPVLAMPCSHLFHAACLKKWLEQSCSCPL 271
PAS AA+ L+ T EE +C++CLE+ + + MPCSHL+H C+ +WL++S CP+
Sbjct: 146 PASRAAISKLETATVEESAVCAVCLEEMAVGSDSTCMPCSHLYHRGCIVEWLQKSRVCPM 205
Query: 272 CRFS 283
CRFS
Sbjct: 206 CRFS 209
>ref|NP_001051678.1| Os03g0812200 [Oryza sativa Japonica Group]
gi|32129334|gb|AAP73861.1| unknown protein [Oryza sativa
Japonica Group] gi|40786589|gb|AAR89864.1| putative ring
finger protein [Oryza sativa Japonica Group]
gi|108711712|gb|ABF99507.1| Zinc finger, C3HC4 type
family protein, expressed [Oryza sativa Japonica Group]
gi|113550149|dbj|BAF13592.1| Os03g0812200 [Oryza sativa
Japonica Group] gi|125546172|gb|EAY92311.1| hypothetical
protein OsI_14036 [Oryza sativa Indica Group]
gi|125588365|gb|EAZ29029.1| hypothetical protein
OsJ_13080 [Oryza sativa Japonica Group]
gi|215695293|dbj|BAG90484.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215765742|dbj|BAG87439.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 369
Score = 77.0 bits (188), Expect = 2e-12
Identities = 34/66 (51%), Positives = 40/66 (60%)
Frame = +2
Query: 83 GSSPASAAAVEGLKMVTAEEPNICSICLEDFGMATPVLAMPCSHLFHAACLKKWLEQSCS 262
G+ PA AVE L V +E CS+CLEDF M T MPC H FH+ C+ WLE S
Sbjct: 232 GTPPAKKEAVEALPTVNIQEVLGCSVCLEDFEMGTEAKEMPCQHKFHSQCILPWLELHSS 291
Query: 263 CPLCRF 280
CP+CRF
Sbjct: 292 CPICRF 297
>ref|XP_004237213.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum
lycopersicum]
Length = 132
Score = 76.6 bits (187), Expect = 3e-12
Identities = 35/69 (50%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
Frame = +2
Query: 83 GSSPASAAAVEGLKMVTAEEPNI---CSICLEDFGMATPVLAMPCSHLFHAACLKKWLEQ 253
G PAS +++E L+ + A+E N C ICL++ G T VL +PCSH+FHA C+ KWL+
Sbjct: 59 GMVPASESSIELLEPMEADERNSNDECLICLDELGEETDVLRLPCSHMFHAECITKWLQN 118
Query: 254 SCSCPLCRF 280
S CPLCRF
Sbjct: 119 SHYCPLCRF 127
>ref|XP_006349597.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum
tuberosum]
Length = 144
Score = 76.3 bits (186), Expect = 4e-12
Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
Frame = +2
Query: 83 GSSPASAAAVEGLKMVTAEEPNI---CSICLEDFGMATPVLAMPCSHLFHAACLKKWLEQ 253
G PAS +++E L+ + A+E N C +CL++ G T V+ +PCSH+FHA C+ KWLE
Sbjct: 71 GMVPASKSSIELLEPMEADERNSNDECLVCLDELGEETEVVRLPCSHMFHAECITKWLEN 130
Query: 254 SCSCPLCRF 280
S CPLCRF
Sbjct: 131 SHYCPLCRF 139
>ref|XP_002303979.2| zinc finger family protein [Populus trichocarpa]
gi|550343656|gb|EEE78958.2| zinc finger family protein
[Populus trichocarpa]
Length = 388
Score = 75.5 bits (184), Expect = 7e-12
Identities = 31/65 (47%), Positives = 40/65 (61%)
Frame = +2
Query: 83 GSSPASAAAVEGLKMVTAEEPNICSICLEDFGMATPVLAMPCSHLFHAACLKKWLEQSCS 262
G+ PA A+E L VT +EP CS+CL+DF + MPC H FH+ C+ WLE S
Sbjct: 228 GTPPAQKEAIEALPTVTVKEPLQCSVCLDDFEIGAEAREMPCKHKFHSGCILPWLELHSS 287
Query: 263 CPLCR 277
CP+CR
Sbjct: 288 CPVCR 292
>ref|NP_564693.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|15983408|gb|AAL11572.1|AF424578_1 At1g55530/T5A14_7
[Arabidopsis thaliana] gi|4204263|gb|AAD10644.1| Unknown
protein [Arabidopsis thaliana]
gi|14517546|gb|AAK62663.1| At1g55530/T5A14_7
[Arabidopsis thaliana] gi|23308203|gb|AAN18071.1|
At1g55530/T5A14_7 [Arabidopsis thaliana]
gi|332195138|gb|AEE33259.1| RING/U-box domain-containing
protein [Arabidopsis thaliana]
Length = 351
Score = 75.1 bits (183), Expect = 9e-12
Identities = 33/66 (50%), Positives = 41/66 (62%)
Frame = +2
Query: 83 GSSPASAAAVEGLKMVTAEEPNICSICLEDFGMATPVLAMPCSHLFHAACLKKWLEQSCS 262
G+ PA AVE L V EE CS+CL+DF + T MPC+H FH+ CL WLE S
Sbjct: 200 GTPPAKKEAVEALATVKIEETLQCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSS 259
Query: 263 CPLCRF 280
CP+CR+
Sbjct: 260 CPVCRY 265
>ref|XP_006650785.1| PREDICTED: E3 ubiquitin-protein ligase RNF126-like isoform X1
[Oryza brachyantha]
Length = 356
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/66 (50%), Positives = 39/66 (59%)
Frame = +2
Query: 83 GSSPASAAAVEGLKMVTAEEPNICSICLEDFGMATPVLAMPCSHLFHAACLKKWLEQSCS 262
G+ PA AV L V +E CS+CLEDF M T MPC H FH+ C+ WLE S
Sbjct: 220 GTPPAKKEAVAALPTVNIQEVLGCSVCLEDFEMGTEAKEMPCQHKFHSQCILPWLELHSS 279
Query: 263 CPLCRF 280
CP+CRF
Sbjct: 280 CPICRF 285
>ref|XP_006401344.1| hypothetical protein EUTSA_v10013831mg [Eutrema salsugineum]
gi|557102434|gb|ESQ42797.1| hypothetical protein
EUTSA_v10013831mg [Eutrema salsugineum]
Length = 378
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/67 (49%), Positives = 39/67 (58%)
Frame = +2
Query: 80 RGSSPASAAAVEGLKMVTAEEPNICSICLEDFGMATPVLAMPCSHLFHAACLKKWLEQSC 259
+G+ PA AVE L V EP CS+CL+DF T MPC H FH C+ WLE
Sbjct: 232 QGTPPARKEAVEALPTVKIMEPLQCSVCLDDFEKGTEAKEMPCKHKFHVPCIVPWLELHS 291
Query: 260 SCPLCRF 280
SCP+CRF
Sbjct: 292 SCPVCRF 298
>ref|XP_006392629.1| hypothetical protein EUTSA_v10012351mg, partial [Eutrema
salsugineum] gi|557089207|gb|ESQ29915.1| hypothetical
protein EUTSA_v10012351mg, partial [Eutrema salsugineum]
Length = 389
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/66 (50%), Positives = 39/66 (59%)
Frame = +2
Query: 83 GSSPASAAAVEGLKMVTAEEPNICSICLEDFGMATPVLAMPCSHLFHAACLKKWLEQSCS 262
G+ PA AVE L V EE CS+CL+DF + T MPC H FH CL WLE S
Sbjct: 261 GTPPARKEAVEALASVKIEETLQCSVCLDDFDIGTEAKQMPCEHKFHGECLLPWLELHSS 320
Query: 263 CPLCRF 280
CP+CR+
Sbjct: 321 CPVCRY 326
>ref|NP_200445.1| protein ATCRT1 [Arabidopsis thaliana] gi|10177832|dbj|BAB11261.1|
unnamed protein product [Arabidopsis thaliana]
gi|17380898|gb|AAL36261.1| unknown protein [Arabidopsis
thaliana] gi|20259581|gb|AAM14133.1| unknown protein
[Arabidopsis thaliana] gi|332009368|gb|AED96751.1|
RING/U-box domain-containing protein [Arabidopsis
thaliana]
Length = 396
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/67 (49%), Positives = 39/67 (58%)
Frame = +2
Query: 80 RGSSPASAAAVEGLKMVTAEEPNICSICLEDFGMATPVLAMPCSHLFHAACLKKWLEQSC 259
+G+ PA AVE L V EP CS+CL+DF T MPC H FH C+ WLE
Sbjct: 235 QGTPPARKEAVEALPTVKIMEPLQCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHS 294
Query: 260 SCPLCRF 280
SCP+CRF
Sbjct: 295 SCPVCRF 301
>ref|XP_002523395.1| zinc finger protein, putative [Ricinus communis]
gi|223537345|gb|EEF38974.1| zinc finger protein,
putative [Ricinus communis]
Length = 394
Score = 74.7 bits (182), Expect = 1e-11
Identities = 31/66 (46%), Positives = 40/66 (60%)
Frame = +2
Query: 83 GSSPASAAAVEGLKMVTAEEPNICSICLEDFGMATPVLAMPCSHLFHAACLKKWLEQSCS 262
G+ PA A+E L VT + + CS+CL+DF + T MPC H FH C+ WLE S
Sbjct: 218 GTPPAQKEAIEALPTVTIKNTSQCSVCLDDFEIGTEAKEMPCKHRFHDVCILPWLELHSS 277
Query: 263 CPLCRF 280
CP+CRF
Sbjct: 278 CPVCRF 283
>ref|XP_006305221.1| hypothetical protein CARUB_v10009589mg [Capsella rubella]
gi|482573932|gb|EOA38119.1| hypothetical protein
CARUB_v10009589mg [Capsella rubella]
Length = 351
Score = 74.3 bits (181), Expect = 2e-11
Identities = 33/66 (50%), Positives = 39/66 (59%)
Frame = +2
Query: 83 GSSPASAAAVEGLKMVTAEEPNICSICLEDFGMATPVLAMPCSHLFHAACLKKWLEQSCS 262
G+ PA AVE L V EE CS+CL+DF + T MPC H FH CL WLE S
Sbjct: 202 GTPPAKKEAVEALATVKIEETLQCSVCLDDFEIGTEAKLMPCKHKFHVDCLLPWLELHSS 261
Query: 263 CPLCRF 280
CP+CR+
Sbjct: 262 CPVCRY 267
>ref|XP_002882822.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297328662|gb|EFH59081.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 294
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +2
Query: 32 FALFFQSEGRNNAHFDRGSSPASAAAVEGLKMVTAEEPNI-CSICLEDFGMATPVLAMPC 208
F Q N+ + G+ PA+ AVE L MV EE + CS+CL+DF + MPC
Sbjct: 173 FETLLQRLAENDLNNRYGTPPATKEAVEALAMVKIEESLLQCSVCLDDFEIGMEAKEMPC 232
Query: 209 SHLFHAACLKKWLEQSCSCPLCRF 280
H FH+ CL WLE SCP+CR+
Sbjct: 233 KHKFHSDCLLPWLELHSSCPVCRY 256
>ref|NP_001147077.1| RING finger protein 126 [Zea mays] gi|195607098|gb|ACG25379.1| RING
finger protein 126 [Zea mays]
Length = 308
Score = 74.3 bits (181), Expect = 2e-11
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +2
Query: 32 FALFFQSEGRNNAHFDRGSSPASAAAVEGLKMVTAEEPNI-CSICLEDFGMATPVLAMPC 208
F + Q N+ + G+ PA+ AVE L+ V EE + C++CL+DF + MPC
Sbjct: 184 FEMLLQRLAENDPNNRYGTPPATKEAVESLETVMVEESLVQCTVCLDDFEIGVEAKEMPC 243
Query: 209 SHLFHAACLKKWLEQSCSCPLCRF 280
H FH+ CL WLE SCP+CR+
Sbjct: 244 KHKFHSECLLPWLELHSSCPVCRY 267
>ref|XP_004294935.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Fragaria vesca subsp. vesca]
gi|470117588|ref|XP_004294936.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform 2 [Fragaria
vesca subsp. vesca] gi|470117590|ref|XP_004294937.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform 3 [Fragaria vesca subsp. vesca]
Length = 375
Score = 73.9 bits (180), Expect = 2e-11
Identities = 32/66 (48%), Positives = 39/66 (59%)
Frame = +2
Query: 83 GSSPASAAAVEGLKMVTAEEPNICSICLEDFGMATPVLAMPCSHLFHAACLKKWLEQSCS 262
G+ PA AVEGL VT +E CS+CL+D + MPC H FH C+ WLE S
Sbjct: 217 GTPPAKKEAVEGLPTVTVKENLQCSVCLDDLEIGVEAKEMPCKHKFHGECILPWLELHSS 276
Query: 263 CPLCRF 280
CP+CRF
Sbjct: 277 CPVCRF 282
>gb|ACG42033.1| RHC1A [Zea mays]
Length = 321
Score = 73.9 bits (180), Expect = 2e-11
Identities = 31/66 (46%), Positives = 40/66 (60%)
Frame = +2
Query: 83 GSSPASAAAVEGLKMVTAEEPNICSICLEDFGMATPVLAMPCSHLFHAACLKKWLEQSCS 262
G+ PA AVE L V E CS+CL+D + +P MPC H FH++C+ WLE S
Sbjct: 174 GTPPAKREAVEALPTVQIAEAVSCSVCLDDLELGSPAKQMPCGHRFHSSCILPWLELHSS 233
Query: 263 CPLCRF 280
CP+CRF
Sbjct: 234 CPVCRF 239
>ref|NP_001144032.1| uncharacterized protein LOC100276856 [Zea mays]
gi|195635753|gb|ACG37345.1| hypothetical protein [Zea
mays]
Length = 342
Score = 73.9 bits (180), Expect = 2e-11
Identities = 31/66 (46%), Positives = 40/66 (60%)
Frame = +2
Query: 83 GSSPASAAAVEGLKMVTAEEPNICSICLEDFGMATPVLAMPCSHLFHAACLKKWLEQSCS 262
G+ PA AVE L V E CS+CL+D + +P MPC H FH++C+ WLE S
Sbjct: 174 GTPPAKREAVEALPTVQIAEAVSCSVCLDDLELGSPAKQMPCGHRFHSSCILPWLELHSS 233
Query: 263 CPLCRF 280
CP+CRF
Sbjct: 234 CPVCRF 239
>ref|NP_001182786.1| RHC1A [Zea mays] gi|195612900|gb|ACG28280.1| RHC1A [Zea mays]
Length = 310
Score = 73.9 bits (180), Expect = 2e-11
Identities = 31/66 (46%), Positives = 40/66 (60%)
Frame = +2
Query: 83 GSSPASAAAVEGLKMVTAEEPNICSICLEDFGMATPVLAMPCSHLFHAACLKKWLEQSCS 262
G+ PA AVE L V E CS+CL+D + +P MPC H FH++C+ WLE S
Sbjct: 171 GTPPAKREAVEALPTVQIAEAVSCSVCLDDLELGSPAKQMPCGHRFHSSCILPWLELHSS 230
Query: 263 CPLCRF 280
CP+CRF
Sbjct: 231 CPVCRF 236
>ref|NP_001140503.1| uncharacterized LOC100272564 [Zea mays] gi|194699744|gb|ACF83956.1|
unknown [Zea mays] gi|413949698|gb|AFW82347.1| putative
RING zinc finger domain superfamily protein isoform 1
[Zea mays] gi|413949699|gb|AFW82348.1| putative RING
zinc finger domain superfamily protein isoform 2 [Zea
mays]
Length = 312
Score = 73.9 bits (180), Expect = 2e-11
Identities = 31/66 (46%), Positives = 40/66 (60%)
Frame = +2
Query: 83 GSSPASAAAVEGLKMVTAEEPNICSICLEDFGMATPVLAMPCSHLFHAACLKKWLEQSCS 262
G+ PA AVE L V E CS+CL+D + +P MPC H FH++C+ WLE S
Sbjct: 172 GTPPAKREAVEALPTVQIAEAVSCSVCLDDLELGSPAKQMPCGHRFHSSCILPWLELHSS 231
Query: 263 CPLCRF 280
CP+CRF
Sbjct: 232 CPVCRF 237