BLASTX nr result
ID: Zingiber23_contig00050713
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00050713
(297 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 126 3e-27
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 126 3e-27
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 124 2e-26
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 122 5e-26
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 119 4e-25
tpg|DAA37177.1| TPA: putative DNA-directed RNA polymerase family... 116 3e-24
ref|XP_002502032.1| predicted protein [Micromonas sp. RCC299] gi... 110 3e-22
ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Sela... 109 3e-22
ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Sela... 109 3e-22
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s... 107 1e-21
ref|XP_004338971.1| ferrochelatase [Acanthamoeba castellanii str... 106 4e-21
ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi... 106 4e-21
gb|EMS65535.1| DNA-directed RNA polymerase III subunit RPC1 [Tri... 105 5e-21
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 105 5e-21
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 105 5e-21
ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III s... 104 1e-20
gb|EMT10482.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg... 102 4e-20
ref|XP_002181195.1| rna polymerase C 157 kDa [Phaeodactylum tric... 102 4e-20
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 101 9e-20
gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg... 101 1e-19
>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
Length = 1321
Score = 126 bits (316), Expect = 3e-27
Identities = 66/98 (67%), Positives = 81/98 (82%)
Frame = +1
Query: 1 LPISRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVLGSG 180
L + RIKEIINAAK ISTPIITA L ++ +V+ AR+VK S+EK LGEVA+A+KIVL S
Sbjct: 1004 LGVPRIKEIINAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSS 1063
Query: 181 QPYISIKLDMDLIEALHMGLTAESVRHSILNHPKIKLK 294
QP + +KLDM IEALHMG++A+SV+ SILNHPKIKLK
Sbjct: 1064 QPNLVVKLDMQRIEALHMGISADSVQLSILNHPKIKLK 1101
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 126 bits (316), Expect = 3e-27
Identities = 66/98 (67%), Positives = 81/98 (82%)
Frame = +1
Query: 1 LPISRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVLGSG 180
L + RIKEIINAAK ISTPIITA L ++ +V+ AR+VK S+EK LGEVA+A+KIVL S
Sbjct: 1066 LGVPRIKEIINAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSS 1125
Query: 181 QPYISIKLDMDLIEALHMGLTAESVRHSILNHPKIKLK 294
QP + +KLDM IEALHMG++A+SV+ SILNHPKIKLK
Sbjct: 1126 QPNLVVKLDMQRIEALHMGISADSVQLSILNHPKIKLK 1163
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
italica]
Length = 1397
Score = 124 bits (310), Expect = 2e-26
Identities = 65/98 (66%), Positives = 79/98 (80%)
Frame = +1
Query: 1 LPISRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVLGSG 180
L + RIKEIINAAK ISTPIIT L + +V+ AR+VK ++EK LGEVA A+KIVL S
Sbjct: 1079 LGVPRIKEIINAAKKISTPIITTELLSRKDVLSARIVKGAMEKAVLGEVASAIKIVLKSS 1138
Query: 181 QPYISIKLDMDLIEALHMGLTAESVRHSILNHPKIKLK 294
QP + +KLDM LIEALHMG++A+SV+ SILNHPKIKLK
Sbjct: 1139 QPNLVVKLDMQLIEALHMGISADSVQLSILNHPKIKLK 1176
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 122 bits (306), Expect = 5e-26
Identities = 64/98 (65%), Positives = 80/98 (81%)
Frame = +1
Query: 1 LPISRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVLGSG 180
L + RIKEIINAA+ ISTPIITA L + +V+ AR+VK S+EK LGEVA A++IVL S
Sbjct: 1073 LGVPRIKEIINAARKISTPIITAQLLSKKDVLSARIVKGSMEKAVLGEVAVAIQIVLKSS 1132
Query: 181 QPYISIKLDMDLIEALHMGLTAESVRHSILNHPKIKLK 294
QP + +KLDM LIE+LHMG++A+SV+ SILNHPKIKLK
Sbjct: 1133 QPNLIVKLDMQLIESLHMGISADSVQLSILNHPKIKLK 1170
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 119 bits (298), Expect = 4e-25
Identities = 63/98 (64%), Positives = 78/98 (79%)
Frame = +1
Query: 1 LPISRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVLGSG 180
L + RIKEIINAAK ISTPIITA L + +V+ AR+VK S+EK LGEVA+ +KIVL S
Sbjct: 1076 LGVPRIKEIINAAKKISTPIITAELLSGKDVLSARVVKGSMEKAVLGEVAEDIKIVLKSS 1135
Query: 181 QPYISIKLDMDLIEALHMGLTAESVRHSILNHPKIKLK 294
QP + +KLDM IE LHMG++A+SV+ SILNHP+IKLK
Sbjct: 1136 QPNLVVKLDMQRIEDLHMGISADSVQLSILNHPRIKLK 1173
>tpg|DAA37177.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
Length = 336
Score = 116 bits (291), Expect = 3e-24
Identities = 61/98 (62%), Positives = 76/98 (77%)
Frame = +1
Query: 1 LPISRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVLGSG 180
L + RIKEIINAAK ISTPIITA L + +V+ AR+VK S+EK LGEVA ++ VL S
Sbjct: 18 LGVPRIKEIINAAKKISTPIITAQLLSRKDVLSARIVKGSMEKAVLGEVAATIQTVLKSS 77
Query: 181 QPYISIKLDMDLIEALHMGLTAESVRHSILNHPKIKLK 294
P + +KLDM LIE LHMG++A+SV+ SILNHPK+KLK
Sbjct: 78 LPNLVVKLDMQLIETLHMGISADSVKLSILNHPKLKLK 115
>ref|XP_002502032.1| predicted protein [Micromonas sp. RCC299] gi|226517297|gb|ACO63290.1|
predicted protein [Micromonas sp. RCC299]
Length = 1479
Score = 110 bits (274), Expect = 3e-22
Identities = 57/98 (58%), Positives = 71/98 (72%)
Frame = +1
Query: 1 LPISRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVLGSG 180
L + RIKEIINAAKNISTPIITA LE D+NV AR+VK +EKTTLGEV K + +V
Sbjct: 1074 LGVPRIKEIINAAKNISTPIITATLECDDNVKAARVVKGRVEKTTLGEVCKFIDVVYNPS 1133
Query: 181 QPYISIKLDMDLIEALHMGLTAESVRHSILNHPKIKLK 294
Y+ + LD +I AL + +T ESVRHS++ PK+KLK
Sbjct: 1134 ACYVEVCLDPAVISALQLDVTVESVRHSLITAPKLKLK 1171
>ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Selaginella moellendorffii]
gi|300158014|gb|EFJ24638.1| hypothetical protein
SELMODRAFT_442419 [Selaginella moellendorffii]
Length = 1348
Score = 109 bits (273), Expect = 3e-22
Identities = 57/96 (59%), Positives = 74/96 (77%)
Frame = +1
Query: 1 LPISRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVLGSG 180
L + RIKEIINA+K ISTPIITA L ++N+V AR+VK IEKT LG+VAK++KIVL G
Sbjct: 1081 LGVPRIKEIINASKKISTPIITAKLVSENDVKAARIVKGRIEKTALGDVAKSIKIVLRPG 1140
Query: 181 QPYISIKLDMDLIEALHMGLTAESVRHSILNHPKIK 288
Q ++SIKLDMD I +L + + AE+V ++L PKIK
Sbjct: 1141 QAFVSIKLDMDRIYSLQLDIRAETVAEAVLKFPKIK 1176
>ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii]
gi|300146624|gb|EFJ13293.1| hypothetical protein
SELMODRAFT_446351 [Selaginella moellendorffii]
Length = 1393
Score = 109 bits (273), Expect = 3e-22
Identities = 57/96 (59%), Positives = 74/96 (77%)
Frame = +1
Query: 1 LPISRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVLGSG 180
L + RIKEIINA+K ISTPIITA L ++N+V AR+VK IEKT LG+VAK++KIVL G
Sbjct: 1077 LGVPRIKEIINASKKISTPIITAKLVSENDVKAARIVKGRIEKTALGDVAKSIKIVLRPG 1136
Query: 181 QPYISIKLDMDLIEALHMGLTAESVRHSILNHPKIK 288
Q ++SIKLDMD I +L + + AE+V ++L PKIK
Sbjct: 1137 QAFVSIKLDMDRIYSLQLDIRAETVAEAVLKFPKIK 1172
>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1392
Score = 107 bits (268), Expect = 1e-21
Identities = 59/99 (59%), Positives = 74/99 (74%), Gaps = 1/99 (1%)
Frame = +1
Query: 1 LPISRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVLGSG 180
L + RIKEIINAAKNISTPIITA L + ++ FA VK +EK LGEVA +KIVL S
Sbjct: 1072 LGVPRIKEIINAAKNISTPIITAELLSGQDMSFAVKVKRYVEKVVLGEVAAVIKIVLKSS 1131
Query: 181 QPYISIKLDMDLIEAL-HMGLTAESVRHSILNHPKIKLK 294
QP + +KLDM IEA +MG++++SV+ SI+ HPKIKLK
Sbjct: 1132 QPNLVVKLDMQRIEAQGYMGISSDSVQQSIIRHPKIKLK 1170
>ref|XP_004338971.1| ferrochelatase [Acanthamoeba castellanii str. Neff]
gi|440795844|gb|ELR16958.1| ferrochelatase [Acanthamoeba
castellanii str. Neff]
Length = 472
Score = 106 bits (264), Expect = 4e-21
Identities = 56/98 (57%), Positives = 71/98 (72%)
Frame = +1
Query: 1 LPISRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVLGSG 180
L + RIKEIINA+KNISTPIITA L D++ FAR+VK IEKTTLGEV++ +K V G
Sbjct: 130 LGVPRIKEIINASKNISTPIITAILSQDSDEKFARIVKGRIEKTTLGEVSEYIKEVYNPG 189
Query: 181 QPYISIKLDMDLIEALHMGLTAESVRHSILNHPKIKLK 294
YIS+KLD D I AL + + + SV +ILN P+ K+K
Sbjct: 190 GCYISVKLDKDAIRALQLEINSASVMRAILNSPRTKIK 227
>ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi|162691719|gb|EDQ78080.1|
predicted protein [Physcomitrella patens]
Length = 1397
Score = 106 bits (264), Expect = 4e-21
Identities = 57/98 (58%), Positives = 74/98 (75%)
Frame = +1
Query: 1 LPISRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVLGSG 180
L + RIKEIINA+KNISTPIITA L + N+ AR+VK IEKTTLGEVAK++K VL +
Sbjct: 1084 LGVPRIKEIINASKNISTPIITAVLVSGNDEKAARIVKGRIEKTTLGEVAKSIKTVLRAS 1143
Query: 181 QPYISIKLDMDLIEALHMGLTAESVRHSILNHPKIKLK 294
Q IS+KLDM I+AL + + +++V +I+ PKIKLK
Sbjct: 1144 QAIISVKLDMKRIDALQLDINSDTVALAIVQTPKIKLK 1181
>gb|EMS65535.1| DNA-directed RNA polymerase III subunit RPC1 [Triticum urartu]
Length = 689
Score = 105 bits (263), Expect = 5e-21
Identities = 57/98 (58%), Positives = 73/98 (74%)
Frame = +1
Query: 1 LPISRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVLGSG 180
L + RIKEIINA K ISTPIIT L ++ + +FA VK SIEK LGEVA A+KIVL S
Sbjct: 371 LGVPRIKEIINAVKKISTPIITTELLSEQDELFAAKVKRSIEKVVLGEVAAAIKIVLKSN 430
Query: 181 QPYISIKLDMDLIEALHMGLTAESVRHSILNHPKIKLK 294
QPY+ ++LDM E +MG+++++V+ SILN PKIKLK
Sbjct: 431 QPYLVVELDMQRTEG-YMGISSDTVQFSILNDPKIKLK 467
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 105 bits (263), Expect = 5e-21
Identities = 58/99 (58%), Positives = 74/99 (74%)
Frame = +1
Query: 1 LPISRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVLGSG 180
L + RIKEIIN AK ISTPIITAALE +NNV ARMVK IE+TTLG+VAK++KIVL S
Sbjct: 1506 LGVPRIKEIINGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIVLTSR 1565
Query: 181 QPYISIKLDMDLIEALHMGLTAESVRHSILNHPKIKLKE 297
I++ LDM+ I+A + + + VR SIL + +IKLK+
Sbjct: 1566 LALIAVALDMEGIQASQLSIDSNIVRESILRNRRIKLKQ 1604
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 105 bits (263), Expect = 5e-21
Identities = 58/99 (58%), Positives = 74/99 (74%)
Frame = +1
Query: 1 LPISRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVLGSG 180
L + RIKEIIN AK ISTPIITAALE +NNV ARMVK IE+TTLG+VAK++KIVL S
Sbjct: 1070 LGVPRIKEIINGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIVLTSR 1129
Query: 181 QPYISIKLDMDLIEALHMGLTAESVRHSILNHPKIKLKE 297
I++ LDM+ I+A + + + VR SIL + +IKLK+
Sbjct: 1130 LALIAVALDMEGIQASQLSIDSNIVRESILRNRRIKLKQ 1168
>ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Fragaria vesca subsp. vesca]
Length = 1390
Score = 104 bits (259), Expect = 1e-20
Identities = 53/98 (54%), Positives = 68/98 (69%)
Frame = +1
Query: 1 LPISRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVLGSG 180
L + RIKEIIN AKNI TPIIT LE DNN + ARMV IEKT LG+VA+ ++IV+
Sbjct: 1074 LGVPRIKEIINGAKNIHTPIITTVLECDNNPMIARMVAGRIEKTNLGQVAECIEIVMSPR 1133
Query: 181 QPYISIKLDMDLIEALHMGLTAESVRHSILNHPKIKLK 294
Y+ +KLDM +I+ H+ + A V+ SIL P+IKLK
Sbjct: 1134 AAYVEVKLDMAVIQDAHLSIDANVVKQSILGTPRIKLK 1171
>gb|EMT10482.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii]
Length = 832
Score = 102 bits (255), Expect = 4e-20
Identities = 56/98 (57%), Positives = 73/98 (74%)
Frame = +1
Query: 1 LPISRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVLGSG 180
L + RIKEIINA K ISTPIIT L ++ + +FA VK SIEK LGEVA A+KIVL S
Sbjct: 514 LGVPRIKEIINAVKKISTPIITTELLSEQDELFAAKVKCSIEKVVLGEVAAAIKIVLRSN 573
Query: 181 QPYISIKLDMDLIEALHMGLTAESVRHSILNHPKIKLK 294
QP++ ++LDM E +MG+++++V+ SILN PKIKLK
Sbjct: 574 QPHLVVELDMQRTER-YMGISSDTVQLSILNDPKIKLK 610
>ref|XP_002181195.1| rna polymerase C 157 kDa [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407181|gb|EEC47118.1| rna polymerase C 157 kDa
[Phaeodactylum tricornutum CCAP 1055/1]
Length = 1281
Score = 102 bits (255), Expect = 4e-20
Identities = 57/90 (63%), Positives = 67/90 (74%)
Frame = +1
Query: 1 LPISRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVLGSG 180
L + R+KEIINAAK ISTPIITA LE DNN V AR+VK+ IEKTTLGEV+K +K V G
Sbjct: 1001 LGVPRLKEIINAAKLISTPIITAKLECDNNKVAARIVKAVIEKTTLGEVSKYMKEVYAPG 1060
Query: 181 QPYISIKLDMDLIEALHMGLTAESVRHSIL 270
YIS++LDMD IE L + + SVR SIL
Sbjct: 1061 SCYISVELDMDAIEQLKLNVDVHSVRRSIL 1090
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
sativus]
Length = 1400
Score = 101 bits (252), Expect = 9e-20
Identities = 54/98 (55%), Positives = 70/98 (71%)
Frame = +1
Query: 1 LPISRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVLGSG 180
L + RIKEIIN AK ISTPI+TAAL +D+NV ARMVK+ IEKT LG++AK ++IV+ S
Sbjct: 1081 LGVPRIKEIINGAKRISTPIVTAALTHDDNVNIARMVKARIEKTNLGQIAKCIQIVMSSR 1140
Query: 181 QPYISIKLDMDLIEALHMGLTAESVRHSILNHPKIKLK 294
I IKLDM+ I + + A V+ +IL PK+KLK
Sbjct: 1141 SALIEIKLDMEKIRDAELYVDANVVKQAILVTPKLKLK 1178
>gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii]
Length = 1117
Score = 101 bits (251), Expect = 1e-19
Identities = 58/99 (58%), Positives = 71/99 (71%), Gaps = 1/99 (1%)
Frame = +1
Query: 1 LPISRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVLGSG 180
L + RIKEIINAAK ISTPIITA L + + F VK IEK LGEVA A+KIVL S
Sbjct: 796 LGVPRIKEIINAAKKISTPIITAELLSGQDESFGVKVKRCIEKVVLGEVAAAIKIVLKSS 855
Query: 181 QPYISIKLDMDLIEAL-HMGLTAESVRHSILNHPKIKLK 294
QP + +KLDM IEA + G+ A+SV+ SI+N+PK+KLK
Sbjct: 856 QPNLVVKLDMQRIEAQGYEGINADSVQLSIINYPKLKLK 894