BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00050686
         (422 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15973.3| unnamed protein product [Vitis vinifera]               96   6e-18
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...    96   6e-18
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]    96   6e-18
gb|EOY33741.1| Tetratricopeptide repeat (TPR)-like superfamily p...    89   5e-16
ref|XP_006410036.1| hypothetical protein EUTSA_v10016305mg [Eutr...    86   5e-15
ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp....    85   9e-15
ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containi...    84   3e-14
gb|EMJ07625.1| hypothetical protein PRUPE_ppa001946mg [Prunus pe...    84   3e-14
gb|EPS69071.1| hypothetical protein M569_05691, partial [Genlise...    83   3e-14
ref|XP_004241167.1| PREDICTED: pentatricopeptide repeat-containi...    83   3e-14
ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containi...    83   4e-14
ref|NP_180537.1| RNA editing factor OTP81 [Arabidopsis thaliana]...    82   6e-14
ref|XP_004295750.1| PREDICTED: pentatricopeptide repeat-containi...    82   1e-13
ref|XP_006293749.1| hypothetical protein CARUB_v10022711mg [Caps...    80   4e-13
gb|EXC01449.1| hypothetical protein L484_022020 [Morus notabilis]      79   8e-13
ref|XP_006856643.1| hypothetical protein AMTR_s01859p00006880, p...    78   1e-12
ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
ref|XP_006428806.1| hypothetical protein CICLE_v10011151mg [Citr...    77   2e-12
ref|XP_002525630.1| pentatricopeptide repeat-containing protein,...    73   4e-11
gb|AFN53666.1| hypothetical protein [Linum usitatissimum]              72   6e-11

>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 47/98 (47%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
 Frame = +3

Query: 90  NRNCVRVNSNG--DDHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVGAS 263
           N N + +N++    +HP L L+D     +T+ + +IH +MLR GL   PFSASRL+  A+
Sbjct: 21  NPNSITLNNDRYFANHPTLSLIDQCS--ETKQLKQIHAQMLRTGLFFDPFSASRLITAAA 78

Query: 264 LSPSPDLAYARRLFDSIPFPNLFSWNTLIRAHAAGPDP 377
           LSP P L YA+++FD IP PNL++WNTLIRA+A+  +P
Sbjct: 79  LSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNP 116


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 47/98 (47%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
 Frame = +3

Query: 90  NRNCVRVNSNG--DDHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVGAS 263
           N N + +N++    +HP L L+D     +T+ + +IH +MLR GL   PFSASRL+  A+
Sbjct: 21  NPNSITLNNDRYFANHPTLSLIDQCS--ETKQLKQIHAQMLRTGLFFDPFSASRLITAAA 78

Query: 264 LSPSPDLAYARRLFDSIPFPNLFSWNTLIRAHAAGPDP 377
           LSP P L YA+++FD IP PNL++WNTLIRA+A+  +P
Sbjct: 79  LSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNP 116


>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
          Length = 694

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 47/98 (47%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
 Frame = +3

Query: 90  NRNCVRVNSNG--DDHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVGAS 263
           N N + +N++    +HP L L+D     +T+ + +IH +MLR GL   PFSASRL+  A+
Sbjct: 21  NPNSITLNNDRYFANHPTLSLIDQCS--ETKQLKQIHAQMLRTGLFFDPFSASRLITAAA 78

Query: 264 LSPSPDLAYARRLFDSIPFPNLFSWNTLIRAHAAGPDP 377
           LSP P L YA+++FD IP PNL++WNTLIRA+A+  +P
Sbjct: 79  LSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNP 116


>gb|EOY33741.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 733

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 42/88 (47%), Positives = 61/88 (69%)
 Frame = +3

Query: 114 SNGDDHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVGASLSPSPDLAYA 293
           +N  D PVL  ++    L+   + +IH +MLR GL  +P+SAS+L   ++LSP   L YA
Sbjct: 21  NNDHDDPVLSRINQCTNLNQ--LKQIHAQMLRTGLFFNPYSASKLFAASALSPFSSLDYA 78

Query: 294 RRLFDSIPFPNLFSWNTLIRAHAAGPDP 377
           R++FD IP PNL++WNTLIR +A+GP+P
Sbjct: 79  RKVFDQIPKPNLYTWNTLIRVYASGPEP 106


>ref|XP_006410036.1| hypothetical protein EUTSA_v10016305mg [Eutrema salsugineum]
           gi|557111205|gb|ESQ51489.1| hypothetical protein
           EUTSA_v10016305mg [Eutrema salsugineum]
          Length = 739

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 50/107 (46%), Positives = 67/107 (62%)
 Frame = +3

Query: 57  IALPMRASNDSNRNCVRVNSNGDDHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFS 236
           ++LP R    SN N    N+    H  L L+D  R  D R + +IH +M+R GL +  +S
Sbjct: 10  LSLP-RHPTFSNPNQPTTNNERSRH-TLSLID--RCADLRQLKQIHAQMVRTGLFNDHYS 65

Query: 237 ASRLLVGASLSPSPDLAYARRLFDSIPFPNLFSWNTLIRAHAAGPDP 377
           AS+L   A+LSP   L YA ++FD IP PN F+WNTLIRA+A+GPDP
Sbjct: 66  ASKLFAIAALSPFASLDYACKVFDQIPQPNSFTWNTLIRAYASGPDP 112


>ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325073|gb|EFH55493.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 48/107 (44%), Positives = 65/107 (60%)
 Frame = +3

Query: 57  IALPMRASNDSNRNCVRVNSNGDDHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFS 236
           ++LP R  N SN N    N+    H +  L+D  R    R + + H  M+R G+   P+S
Sbjct: 10  LSLP-RHPNFSNPNQPTTNNERSRHTI-SLID--RCSSLRQLKQTHAHMIRTGMFSDPYS 65

Query: 237 ASRLLVGASLSPSPDLAYARRLFDSIPFPNLFSWNTLIRAHAAGPDP 377
           AS+L   A+LS    L YAR++FD IP PN F+WNTLIRA+A+GPDP
Sbjct: 66  ASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDP 112


>ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum tuberosum]
          Length = 744

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 40/85 (47%), Positives = 59/85 (69%)
 Frame = +3

Query: 123 DDHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVGASLSPSPDLAYARRL 302
           ++HP++ L+D  + +  + + +IH  MLR+GL   PFSAS+L+  +SLS    L YA ++
Sbjct: 34  ENHPLVLLIDKCQSI--KQLKQIHAYMLRIGLFSDPFSASKLIEASSLSHFSSLDYAHKV 91

Query: 303 FDSIPFPNLFSWNTLIRAHAAGPDP 377
           FD IP PNLFSWN LIRA+++  DP
Sbjct: 92  FDEIPQPNLFSWNALIRAYSSSQDP 116


>gb|EMJ07625.1| hypothetical protein PRUPE_ppa001946mg [Prunus persica]
          Length = 738

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 38/83 (45%), Positives = 58/83 (69%)
 Frame = +3

Query: 129 HPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVGASLSPSPDLAYARRLFD 308
           HP L L+D    +  + + ++H +MLR G+L  P+SAS+L+  ++LS    L YAR++FD
Sbjct: 31  HPALSLIDQCTSI--KQLKQVHAQMLRTGVLFDPYSASKLITASALSSFSSLDYARQVFD 88

Query: 309 SIPFPNLFSWNTLIRAHAAGPDP 377
            IP PN+++WNTLIRA+A+  DP
Sbjct: 89  QIPQPNVYTWNTLIRAYASSSDP 111


>gb|EPS69071.1| hypothetical protein M569_05691, partial [Genlisea aurea]
          Length = 726

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 40/85 (47%), Positives = 59/85 (69%)
 Frame = +3

Query: 123 DDHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVGASLSPSPDLAYARRL 302
           + HP + L+D  R    + + +IHC+MLR GLL  PF+AS+L+  ++LS    LAYA+++
Sbjct: 9   EKHPTVTLID--RCTSQKQLKQIHCQMLRSGLLDDPFAASKLISLSALSDFSSLAYAQKV 66

Query: 303 FDSIPFPNLFSWNTLIRAHAAGPDP 377
           FD +P PNLFSWN L+RA+A+   P
Sbjct: 67  FDQMPRPNLFSWNILVRAYASASRP 91


>ref|XP_004241167.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum lycopersicum]
          Length = 744

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 40/85 (47%), Positives = 59/85 (69%)
 Frame = +3

Query: 123 DDHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVGASLSPSPDLAYARRL 302
           ++HP++ L+D  + ++   + +IH  MLR+GL   PFSAS+L+  +SLS    L YA ++
Sbjct: 34  ENHPLVLLIDKSQSINQ--LKQIHAYMLRIGLFFDPFSASKLIEASSLSHFSSLDYAHKV 91

Query: 303 FDSIPFPNLFSWNTLIRAHAAGPDP 377
           FD IP PNLFSWN LIRA+++  DP
Sbjct: 92  FDEIPQPNLFSWNALIRAYSSSQDP 116


>ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449470513|ref|XP_004152961.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
           gi|449523079|ref|XP_004168552.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 40/84 (47%), Positives = 55/84 (65%)
 Frame = +3

Query: 126 DHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVGASLSPSPDLAYARRLF 305
           +H +L  +D  +   ++ +  +H RMLR GL   PFSAS+L   ++LS    L YAR LF
Sbjct: 25  NHQILSTID--KCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLF 82

Query: 306 DSIPFPNLFSWNTLIRAHAAGPDP 377
           D IP PNL++WNTLIRA+A+  DP
Sbjct: 83  DQIPQPNLYTWNTLIRAYASSSDP 106


>ref|NP_180537.1| RNA editing factor OTP81 [Arabidopsis thaliana]
           gi|75100656|sp|O82380.1|PP175_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
           gi|3582328|gb|AAC35225.1| hypothetical protein
           [Arabidopsis thaliana] gi|330253207|gb|AEC08301.1| RNA
           editing factor OTP81 [Arabidopsis thaliana]
          Length = 738

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 47/107 (43%), Positives = 65/107 (60%)
 Frame = +3

Query: 57  IALPMRASNDSNRNCVRVNSNGDDHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFS 236
           ++LP R  N SN N    N+    H  + L++  R +  R + + H  M+R G    P+S
Sbjct: 10  LSLP-RHPNFSNPNQPTTNNERSRH--ISLIE--RCVSLRQLKQTHGHMIRTGTFSDPYS 64

Query: 237 ASRLLVGASLSPSPDLAYARRLFDSIPFPNLFSWNTLIRAHAAGPDP 377
           AS+L   A+LS    L YAR++FD IP PN F+WNTLIRA+A+GPDP
Sbjct: 65  ASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDP 111


>ref|XP_004295750.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 1049

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 39/81 (48%), Positives = 56/81 (69%)
 Frame = +3

Query: 135 VLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVGASLSPSPDLAYARRLFDSI 314
           +L L+D    L+   + ++H +ML+  L   P+SAS+L+  A+LSP   L YAR++FD I
Sbjct: 89  LLPLIDQCTTLNH--LKQVHAQMLKTSLFFDPYSASKLITAAALSPFSSLDYARQVFDEI 146

Query: 315 PFPNLFSWNTLIRAHAAGPDP 377
           P PNLF+WN LIRA+A+ PDP
Sbjct: 147 PEPNLFTWNALIRAYASSPDP 167


>ref|XP_006293749.1| hypothetical protein CARUB_v10022711mg [Capsella rubella]
           gi|482562457|gb|EOA26647.1| hypothetical protein
           CARUB_v10022711mg [Capsella rubella]
          Length = 739

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 46/107 (42%), Positives = 63/107 (58%)
 Frame = +3

Query: 57  IALPMRASNDSNRNCVRVNSNGDDHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFS 236
           ++LP R    S  N    N+    H +  L+D  R  + R + + H  M+R G    P+S
Sbjct: 10  LSLP-RHPTFSGPNQPTTNNERSRHTI-SLID--RCSNLRQLKQTHAHMIRTGTFSDPYS 65

Query: 237 ASRLLVGASLSPSPDLAYARRLFDSIPFPNLFSWNTLIRAHAAGPDP 377
           AS+L   A+LS    L YAR++FD IP PN F+WNTLIRA+A+GPDP
Sbjct: 66  ASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDP 112


>gb|EXC01449.1| hypothetical protein L484_022020 [Morus notabilis]
          Length = 739

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 37/84 (44%), Positives = 57/84 (67%)
 Frame = +3

Query: 126 DHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVGASLSPSPDLAYARRLF 305
           ++P+L L++    L  + + +IH +MLR GL   PFSAS+L+   ++S    L YA ++F
Sbjct: 31  NYPLLSLIEQCTSL--KELKQIHAQMLRTGLFFDPFSASKLITVCAMSSFSSLDYAHQVF 88

Query: 306 DSIPFPNLFSWNTLIRAHAAGPDP 377
           D IP PNL++WNT+IRA+A+  DP
Sbjct: 89  DQIPKPNLYTWNTIIRAYASSSDP 112


>ref|XP_006856643.1| hypothetical protein AMTR_s01859p00006880, partial [Amborella
           trichopoda] gi|548860532|gb|ERN18110.1| hypothetical
           protein AMTR_s01859p00006880, partial [Amborella
           trichopoda]
          Length = 190

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 42/101 (41%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
 Frame = +3

Query: 78  SNDSNRNCVRVNSNGDDHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVG 257
           +N    N    +    DHP L LL+  R  +T+ + +IH  ++RLGL+ HP+  SRLL  
Sbjct: 17  TNPKPNNSNSSSKQFSDHPSLILLE--RCKNTKQLPQIHAHLIRLGLIFHPYPLSRLLTI 74

Query: 258 ASLSPSPD-LAYARRLFDSIPFPNLFSWNTLIRAHAAGPDP 377
           ++LS S + L+YA ++F+ IP PNL+ +NT+IRAHA+   P
Sbjct: 75  SALSNSENALSYALKIFEQIPQPNLYMYNTIIRAHASSRSP 115


>ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Citrus sinensis]
          Length = 746

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 36/83 (43%), Positives = 53/83 (63%)
 Frame = +3

Query: 129 HPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVGASLSPSPDLAYARRLFD 308
           HPV  L+   + +  + + +IH +MLR GL   P+SAS+L    +L     L YAR +FD
Sbjct: 40  HPVFSLIKQCKNI--KQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFD 97

Query: 309 SIPFPNLFSWNTLIRAHAAGPDP 377
            IP PNL++WNTLIRA+++  +P
Sbjct: 98  QIPQPNLYTWNTLIRAYSSSAEP 120


>ref|XP_006428806.1| hypothetical protein CICLE_v10011151mg [Citrus clementina]
           gi|557530863|gb|ESR42046.1| hypothetical protein
           CICLE_v10011151mg [Citrus clementina]
          Length = 737

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 36/83 (43%), Positives = 53/83 (63%)
 Frame = +3

Query: 129 HPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVGASLSPSPDLAYARRLFD 308
           HPV  L+   + +  + + +IH +MLR GL   P+SAS+L    +L     L YAR +FD
Sbjct: 31  HPVFSLIKQCKNI--KQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFD 88

Query: 309 SIPFPNLFSWNTLIRAHAAGPDP 377
            IP PNL++WNTLIRA+++  +P
Sbjct: 89  QIPQPNLYTWNTLIRAYSSSAEP 111


>ref|XP_002525630.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535066|gb|EEF36748.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 765

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 36/80 (45%), Positives = 52/80 (65%)
 Frame = +3

Query: 138 LQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVGASLSPSPDLAYARRLFDSIP 317
           L L+D    L  + +  +H  +LR GL  HP++AS+L   A+LS    L YAR++F+ I 
Sbjct: 35  LSLIDQCTNL--KHLKELHATILRSGLFFHPYNASKLFSVAALSSFSSLDYARKVFEEIS 92

Query: 318 FPNLFSWNTLIRAHAAGPDP 377
            PNL++WNTLIRA A+ P+P
Sbjct: 93  QPNLYTWNTLIRAFASSPEP 112


>gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 38/88 (43%), Positives = 51/88 (57%)
 Frame = +3

Query: 114 SNGDDHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVGASLSPSPDLAYA 293
           +N  D  + Q    +++L      +IH +MLR   LH P++AS L   A+ S    L YA
Sbjct: 138 TNVGDRALFQQCTSFKQLK-----QIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYA 192

Query: 294 RRLFDSIPFPNLFSWNTLIRAHAAGPDP 377
           R++FD IP PNL+SWN LIRA A   DP
Sbjct: 193 RKVFDQIPQPNLYSWNILIRALATSSDP 220