BLASTX nr result
ID: Zingiber23_contig00050459
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00050459
(362 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006644998.1| PREDICTED: pumilio homolog 2-like [Oryza bra... 80 4e-13
ref|XP_004970555.1| PREDICTED: pumilio homolog 2-like [Setaria i... 79 5e-13
ref|XP_006358700.1| PREDICTED: pumilio homolog 2-like [Solanum t... 79 6e-13
ref|XP_004240371.1| PREDICTED: pumilio homolog 2-like [Solanum l... 79 6e-13
ref|XP_002456623.1| hypothetical protein SORBIDRAFT_03g039600 [S... 79 6e-13
gb|EAY76473.1| hypothetical protein OsI_04410 [Oryza sativa Indi... 79 6e-13
ref|NP_001044782.1| Os01g0844800 [Oryza sativa Japonica Group] g... 79 6e-13
dbj|BAB89558.1| putative pumilio domain-containing protein PPD1 ... 79 6e-13
gb|EXC10703.1| Pumilio-2-like protein [Morus notabilis] 77 2e-12
ref|XP_003597396.1| Pumilio-like protein [Medicago truncatula] g... 77 2e-12
ref|XP_006846288.1| hypothetical protein AMTR_s00012p00251030 [A... 77 3e-12
ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vin... 77 3e-12
emb|CBI16096.3| unnamed protein product [Vitis vinifera] 77 3e-12
emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera] 77 3e-12
ref|XP_004294652.1| PREDICTED: pumilio homolog 2-like [Fragaria ... 76 4e-12
gb|ADE77507.1| unknown [Picea sitchensis] 76 4e-12
ref|XP_006350783.1| PREDICTED: pumilio homolog 2-like isoform X1... 76 5e-12
gb|ESW04039.1| hypothetical protein PHAVU_011G062300g [Phaseolus... 76 5e-12
gb|ESW04038.1| hypothetical protein PHAVU_011G062200g [Phaseolus... 76 5e-12
ref|XP_006424876.1| hypothetical protein CICLE_v10027726mg [Citr... 76 5e-12
>ref|XP_006644998.1| PREDICTED: pumilio homolog 2-like [Oryza brachyantha]
Length = 1058
Score = 79.7 bits (195), Expect = 4e-13
Identities = 41/50 (82%), Positives = 44/50 (88%)
Frame = +1
Query: 1 NQQREFIVSRIKDHLSALKKYTYGKHIVARVEKLVAAGERRIEFQTQSTS 150
+QQRE I+SRIK HLSALKKYTYGKHIVARVEKLVAAGERRI Q+Q S
Sbjct: 1009 DQQRELILSRIKVHLSALKKYTYGKHIVARVEKLVAAGERRIGLQSQYPS 1058
>ref|XP_004970555.1| PREDICTED: pumilio homolog 2-like [Setaria italica]
Length = 1056
Score = 79.3 bits (194), Expect = 5e-13
Identities = 39/50 (78%), Positives = 45/50 (90%)
Frame = +1
Query: 1 NQQREFIVSRIKDHLSALKKYTYGKHIVARVEKLVAAGERRIEFQTQSTS 150
+QQRE I+SR+K HL+ALKKYTYGKHIVARVEKLVAAGERRI Q+Q+ S
Sbjct: 1007 DQQRELILSRVKVHLNALKKYTYGKHIVARVEKLVAAGERRIGLQSQNPS 1056
>ref|XP_006358700.1| PREDICTED: pumilio homolog 2-like [Solanum tuberosum]
Length = 972
Score = 79.0 bits (193), Expect = 6e-13
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = +1
Query: 1 NQQREFIVSRIKDHLSALKKYTYGKHIVARVEKLVAAGERRIEFQTQSTS 150
+QQRE I+SRIK HL+ALKKYTYGKHIVARVEKLVAAGERRI Q+ ST+
Sbjct: 923 DQQRELIMSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAAQSLSTA 972
>ref|XP_004240371.1| PREDICTED: pumilio homolog 2-like [Solanum lycopersicum]
Length = 1000
Score = 79.0 bits (193), Expect = 6e-13
Identities = 40/50 (80%), Positives = 45/50 (90%)
Frame = +1
Query: 1 NQQREFIVSRIKDHLSALKKYTYGKHIVARVEKLVAAGERRIEFQTQSTS 150
+QQRE I+SRIK HL+ALKKYTYGKHIVARVEKLVAAGERRI Q+ ST+
Sbjct: 951 DQQRELIMSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAAQSLSTA 1000
>ref|XP_002456623.1| hypothetical protein SORBIDRAFT_03g039600 [Sorghum bicolor]
gi|241928598|gb|EES01743.1| hypothetical protein
SORBIDRAFT_03g039600 [Sorghum bicolor]
Length = 1057
Score = 79.0 bits (193), Expect = 6e-13
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = +1
Query: 1 NQQREFIVSRIKDHLSALKKYTYGKHIVARVEKLVAAGERRIEFQTQSTS 150
+QQRE I+SR+K HL+ALKKYTYGKHIVARVEKLVAAGERRI Q Q+ S
Sbjct: 1008 DQQRELILSRVKVHLNALKKYTYGKHIVARVEKLVAAGERRIALQPQNPS 1057
>gb|EAY76473.1| hypothetical protein OsI_04410 [Oryza sativa Indica Group]
Length = 1046
Score = 79.0 bits (193), Expect = 6e-13
Identities = 40/50 (80%), Positives = 43/50 (86%)
Frame = +1
Query: 1 NQQREFIVSRIKDHLSALKKYTYGKHIVARVEKLVAAGERRIEFQTQSTS 150
+QQRE I+SR+K HLSALKKYTYGKHIVARVEKLVAAGERRI Q Q S
Sbjct: 997 DQQRELILSRVKVHLSALKKYTYGKHIVARVEKLVAAGERRIGLQAQYPS 1046
>ref|NP_001044782.1| Os01g0844800 [Oryza sativa Japonica Group]
gi|113534313|dbj|BAF06696.1| Os01g0844800 [Oryza sativa
Japonica Group] gi|215704672|dbj|BAG94300.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 1060
Score = 79.0 bits (193), Expect = 6e-13
Identities = 40/50 (80%), Positives = 43/50 (86%)
Frame = +1
Query: 1 NQQREFIVSRIKDHLSALKKYTYGKHIVARVEKLVAAGERRIEFQTQSTS 150
+QQRE I+SR+K HLSALKKYTYGKHIVARVEKLVAAGERRI Q Q S
Sbjct: 1011 DQQRELILSRVKVHLSALKKYTYGKHIVARVEKLVAAGERRIGLQAQYPS 1060
>dbj|BAB89558.1| putative pumilio domain-containing protein PPD1 [Oryza sativa
Japonica Group] gi|125572616|gb|EAZ14131.1| hypothetical
protein OsJ_04054 [Oryza sativa Japonica Group]
Length = 1048
Score = 79.0 bits (193), Expect = 6e-13
Identities = 40/50 (80%), Positives = 43/50 (86%)
Frame = +1
Query: 1 NQQREFIVSRIKDHLSALKKYTYGKHIVARVEKLVAAGERRIEFQTQSTS 150
+QQRE I+SR+K HLSALKKYTYGKHIVARVEKLVAAGERRI Q Q S
Sbjct: 999 DQQRELILSRVKVHLSALKKYTYGKHIVARVEKLVAAGERRIGLQAQYPS 1048
>gb|EXC10703.1| Pumilio-2-like protein [Morus notabilis]
Length = 1062
Score = 77.4 bits (189), Expect = 2e-12
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +1
Query: 1 NQQREFIVSRIKDHLSALKKYTYGKHIVARVEKLVAAGERRIEFQT 138
+QQRE I+SRIK HL+ALKKYTYGKHIVARVEKLVAAGERRI QT
Sbjct: 1013 DQQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAAQT 1058
>ref|XP_003597396.1| Pumilio-like protein [Medicago truncatula] gi|87241276|gb|ABD33134.1|
Nucleic acid binding NABP [Medicago truncatula]
gi|355486444|gb|AES67647.1| Pumilio-like protein
[Medicago truncatula]
Length = 1047
Score = 77.4 bits (189), Expect = 2e-12
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = +1
Query: 1 NQQREFIVSRIKDHLSALKKYTYGKHIVARVEKLVAAGERRIEFQTQSTS 150
+QQRE I+SRIK HL+ALKKYTYGKHIVARVEKLVAAGERRI Q+ T+
Sbjct: 998 DQQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAAQSPHTT 1047
>ref|XP_006846288.1| hypothetical protein AMTR_s00012p00251030 [Amborella trichopoda]
gi|548849058|gb|ERN07963.1| hypothetical protein
AMTR_s00012p00251030 [Amborella trichopoda]
Length = 1019
Score = 76.6 bits (187), Expect = 3e-12
Identities = 39/50 (78%), Positives = 43/50 (86%)
Frame = +1
Query: 1 NQQREFIVSRIKDHLSALKKYTYGKHIVARVEKLVAAGERRIEFQTQSTS 150
+QQRE I+SRIK HL+ALKKYTYGKHIVARVEKLVAAGERRI Q+ S
Sbjct: 970 DQQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIGIQSSYLS 1019
>ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
Length = 1065
Score = 76.6 bits (187), Expect = 3e-12
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = +1
Query: 1 NQQREFIVSRIKDHLSALKKYTYGKHIVARVEKLVAAGERRIEFQT 138
+QQRE I+SRIK HL+ALKKYTYGKHIVARVEKLVAAGERRI Q+
Sbjct: 1016 DQQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAIQS 1061
>emb|CBI16096.3| unnamed protein product [Vitis vinifera]
Length = 360
Score = 76.6 bits (187), Expect = 3e-12
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = +1
Query: 1 NQQREFIVSRIKDHLSALKKYTYGKHIVARVEKLVAAGERRIEFQT 138
+QQRE I+SRIK HL+ALKKYTYGKHIVARVEKLVAAGERRI Q+
Sbjct: 311 DQQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAIQS 356
>emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera]
Length = 1039
Score = 76.6 bits (187), Expect = 3e-12
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = +1
Query: 1 NQQREFIVSRIKDHLSALKKYTYGKHIVARVEKLVAAGERRIEFQT 138
+QQRE I+SRIK HL+ALKKYTYGKHIVARVEKLVAAGERRI Q+
Sbjct: 990 DQQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAIQS 1035
>ref|XP_004294652.1| PREDICTED: pumilio homolog 2-like [Fragaria vesca subsp. vesca]
Length = 1077
Score = 76.3 bits (186), Expect = 4e-12
Identities = 38/48 (79%), Positives = 42/48 (87%)
Frame = +1
Query: 1 NQQREFIVSRIKDHLSALKKYTYGKHIVARVEKLVAAGERRIEFQTQS 144
+QQRE I+SRIK HL+ALKKYTYGKHIVARVEKLVAAGERR+ QS
Sbjct: 1025 DQQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRVAAAAQS 1072
>gb|ADE77507.1| unknown [Picea sitchensis]
Length = 82
Score = 76.3 bits (186), Expect = 4e-12
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +1
Query: 1 NQQREFIVSRIKDHLSALKKYTYGKHIVARVEKLVAAGERRIEFQTQST 147
+QQRE I+SRIK HL+ALKKYTYGKHIVARVEKLVAAGERRI TQST
Sbjct: 33 DQQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRI--GTQST 79
>ref|XP_006350783.1| PREDICTED: pumilio homolog 2-like isoform X1 [Solanum tuberosum]
Length = 993
Score = 75.9 bits (185), Expect = 5e-12
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = +1
Query: 1 NQQREFIVSRIKDHLSALKKYTYGKHIVARVEKLVAAGERRIEFQT 138
+QQRE I+SRIK HL+ALKKYTYGKHIVARVEKLVAAGERRI Q+
Sbjct: 944 DQQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAAQS 989
>gb|ESW04039.1| hypothetical protein PHAVU_011G062300g [Phaseolus vulgaris]
Length = 1047
Score = 75.9 bits (185), Expect = 5e-12
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = +1
Query: 1 NQQREFIVSRIKDHLSALKKYTYGKHIVARVEKLVAAGERRIEFQT 138
+QQRE I+SRIK HL+ALKKYTYGKHIVARVEKLVAAGERRI Q+
Sbjct: 998 DQQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAAQS 1043
>gb|ESW04038.1| hypothetical protein PHAVU_011G062200g [Phaseolus vulgaris]
Length = 1050
Score = 75.9 bits (185), Expect = 5e-12
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = +1
Query: 1 NQQREFIVSRIKDHLSALKKYTYGKHIVARVEKLVAAGERRIEFQT 138
+QQRE I+SRIK HL+ALKKYTYGKHIVARVEKLVAAGERRI Q+
Sbjct: 1001 DQQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAAQS 1046
>ref|XP_006424876.1| hypothetical protein CICLE_v10027726mg [Citrus clementina]
gi|568870351|ref|XP_006488369.1| PREDICTED: pumilio
homolog 2-like [Citrus sinensis]
gi|557526810|gb|ESR38116.1| hypothetical protein
CICLE_v10027726mg [Citrus clementina]
Length = 1058
Score = 75.9 bits (185), Expect = 5e-12
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = +1
Query: 1 NQQREFIVSRIKDHLSALKKYTYGKHIVARVEKLVAAGERRIEFQT 138
+QQRE I+SRIK HL+ALKKYTYGKHIVARVEKLVAAGERRI Q+
Sbjct: 1009 DQQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAAQS 1054