BLASTX nr result
ID: Zingiber23_contig00050409
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00050409
(255 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM01169.1|AC113336_21 Putative retroelement [Oryza sativa Ja... 67 3e-09
emb|CAA73042.1| polyprotein [Ananas comosus] 66 4e-09
gb|EMJ21095.1| hypothetical protein PRUPE_ppb014768mg [Prunus pe... 65 1e-08
gb|ABF95979.1| retrotransposon protein, putative, Ty3-gypsy subc... 65 1e-08
gb|ABB46919.1| retrotransposon protein, putative, Ty3-gypsy subc... 64 2e-08
gb|ABA97859.1| retrotransposon protein, putative, Ty3-gypsy subc... 64 2e-08
gb|ABA97893.1| retrotransposon protein, putative, Ty3-gypsy subc... 64 2e-08
gb|ABA98373.1| retrotransposon protein, putative, Ty3-gypsy subc... 64 2e-08
gb|AAM01161.2|AC113336_13 Putative retroelement [Oryza sativa Ja... 64 2e-08
gb|AAM08845.1|AC113337_9 Putative retroelement [Oryza sativa Jap... 64 2e-08
emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera] 64 2e-08
gb|AAP52358.2| retrotransposon protein, putative, Ty3-gypsy subc... 64 2e-08
gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa] 64 2e-08
emb|CAE04382.1| OSJNBa0027G07.24 [Oryza sativa Japonica Group] g... 64 2e-08
emb|CAE02460.1| OSJNBa0042D13.13 [Oryza sativa Japonica Group] 64 2e-08
gb|ABA99219.1| retrotransposon protein, putative, Ty3-gypsy subc... 64 3e-08
gb|AAX95202.1| retrotransposon protein, putative, Ty3-gypsy sub-... 64 3e-08
gb|ABA95988.2| retrotransposon protein, putative, Ty3-gypsy subc... 64 3e-08
emb|CAH67735.1| H0522A01.6 [Oryza sativa Indica Group] gi|116310... 64 3e-08
emb|CAD40062.3| OSJNBa0085C10.14 [Oryza sativa Japonica Group] 64 3e-08
>gb|AAM01169.1|AC113336_21 Putative retroelement [Oryza sativa Japonica Group]
Length = 1449
Score = 66.6 bits (161), Expect = 3e-09
Identities = 35/85 (41%), Positives = 54/85 (63%)
Frame = +1
Query: 1 HYHPGKANVVADALSRKSRGVLATHRVAVTDLVRQFSELDLTEVGQTQRGILVSLIAQSP 180
HYHPGKANVVADALSRKS ++ R +L ++F +L+L G +G + +L A+
Sbjct: 907 HYHPGKANVVADALSRKSYCNMSEGRCLPWELCQEFEKLNL---GIVSKGFVAALEAKPT 963
Query: 181 LVERIKESQMEDQYLRSIASELELG 255
L ++I+E+Q+ D Y++ I + G
Sbjct: 964 LFDQIREAQVNDPYIQEIKKNMRRG 988
>emb|CAA73042.1| polyprotein [Ananas comosus]
Length = 871
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/81 (46%), Positives = 48/81 (59%)
Frame = +1
Query: 4 YHPGKANVVADALSRKSRGVLATHRVAVTDLVRQFSELDLTEVGQTQRGILVSLIAQSPL 183
YHPGKANVVADALSRKS LA H V L+ Q L+L V L++L+ Q L
Sbjct: 413 YHPGKANVVADALSRKSMENLAMHVVTQPRLIEQMKRLELEIVTPDTPMRLMTLVVQPTL 472
Query: 184 VERIKESQMEDQYLRSIASEL 246
++RIKE Q D L+ I ++
Sbjct: 473 LDRIKEKQASDVELQKIKGKM 493
>gb|EMJ21095.1| hypothetical protein PRUPE_ppb014768mg [Prunus persica]
Length = 602
Score = 64.7 bits (156), Expect = 1e-08
Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 YHPGKANVVADALSRKSRGVLATHRVAVTDLVRQFSELDLTEVGQTQR-GILVSLIAQSP 180
YHPG+ANVVADALSRK+ G LA R A L+ + + D E+G TQR GI SL +
Sbjct: 85 YHPGRANVVADALSRKTTGSLAHLRTAYLPLLVELRK-DEVELGMTQRGGIFASLHLRPI 143
Query: 181 LVERIKESQMEDQYLRSIASELELG 255
LVER+ +Q+ D L I E+E G
Sbjct: 144 LVERVIVAQLGDPTLCRIRGEVENG 168
>gb|ABF95979.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 352
Score = 64.7 bits (156), Expect = 1e-08
Identities = 37/85 (43%), Positives = 53/85 (62%)
Frame = +1
Query: 1 HYHPGKANVVADALSRKSRGVLATHRVAVTDLVRQFSELDLTEVGQTQRGILVSLIAQSP 180
HYHPGKANVVADALSRKS R ++L +Q L+L+ VG RG L +L A+
Sbjct: 122 HYHPGKANVVADALSRKSHCNTLNVRGIPSELNQQMEALNLSIVG---RGFLAALEAKPT 178
Query: 181 LVERIKESQMEDQYLRSIASELELG 255
L+++I+E+Q D +R + ++ G
Sbjct: 179 LLDQIREAQKNDPDMRGLLKNMKQG 203
>gb|ABB46919.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1778
Score = 63.9 bits (154), Expect = 2e-08
Identities = 35/85 (41%), Positives = 52/85 (61%)
Frame = +1
Query: 1 HYHPGKANVVADALSRKSRGVLATHRVAVTDLVRQFSELDLTEVGQTQRGILVSLIAQSP 180
HYHPGKANVVADALSRKS ++ R +L ++F L+L G +G + +L A+
Sbjct: 1236 HYHPGKANVVADALSRKSYCNMSEGRCLPWELCQEFERLNL---GIVSKGFVATLEAKPT 1292
Query: 181 LVERIKESQMEDQYLRSIASELELG 255
L ++I+E+QM D ++ I + G
Sbjct: 1293 LFDQIREAQMNDPDIQEIKKNMRRG 1317
>gb|ABA97859.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1806
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/85 (43%), Positives = 52/85 (61%)
Frame = +1
Query: 1 HYHPGKANVVADALSRKSRGVLATHRVAVTDLVRQFSELDLTEVGQTQRGILVSLIAQSP 180
HYHPGKANVVADALSRKS R +L +Q L+L+ VG RG L +L A+
Sbjct: 1279 HYHPGKANVVADALSRKSHCNTLNVRGIPPELNQQMEALNLSIVG---RGFLAALEAKPT 1335
Query: 181 LVERIKESQMEDQYLRSIASELELG 255
L+++I+E+Q D +R + ++ G
Sbjct: 1336 LLDQIREAQKNDPDMRGLLKNMKQG 1360
>gb|ABA97893.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 816
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/85 (43%), Positives = 52/85 (61%)
Frame = +1
Query: 1 HYHPGKANVVADALSRKSRGVLATHRVAVTDLVRQFSELDLTEVGQTQRGILVSLIAQSP 180
HYHPGKANVVADALSRKS R +L +Q L+L+ VG RG L +L A+
Sbjct: 274 HYHPGKANVVADALSRKSHCNTLNVRGIPPELNQQMEALNLSIVG---RGFLATLEAKPT 330
Query: 181 LVERIKESQMEDQYLRSIASELELG 255
L+++I+E+Q D +R + ++ G
Sbjct: 331 LLDQIREAQKNDPDMRGLLKNMKQG 355
>gb|ABA98373.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 481
Score = 63.9 bits (154), Expect = 2e-08
Identities = 34/85 (40%), Positives = 51/85 (60%)
Frame = +1
Query: 1 HYHPGKANVVADALSRKSRGVLATHRVAVTDLVRQFSELDLTEVGQTQRGILVSLIAQSP 180
HYHPGKANVVADALSRK R +L ++F L+L G RG + +L A+S
Sbjct: 308 HYHPGKANVVADALSRKGYCNATEGRQLPLELCKEFERLNL---GIVSRGFVAALEAKST 364
Query: 181 LVERIKESQMEDQYLRSIASELELG 255
L+++++E+Q+ D ++ I + G
Sbjct: 365 LIDQVRETQINDPDIQEIKKNMRRG 389
>gb|AAM01161.2|AC113336_13 Putative retroelement [Oryza sativa Japonica Group]
gi|78707943|gb|ABB46918.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1661
Score = 63.9 bits (154), Expect = 2e-08
Identities = 35/85 (41%), Positives = 52/85 (61%)
Frame = +1
Query: 1 HYHPGKANVVADALSRKSRGVLATHRVAVTDLVRQFSELDLTEVGQTQRGILVSLIAQSP 180
HYHPGKANVVADALSRKS ++ R +L ++F L+L G +G + +L A+
Sbjct: 1251 HYHPGKANVVADALSRKSYCNMSEARCLPWELCQEFERLNL---GIVSKGFVATLEAKPT 1307
Query: 181 LVERIKESQMEDQYLRSIASELELG 255
L ++I+E+QM D ++ I + G
Sbjct: 1308 LFDQIREAQMNDPDIQEIKKNMRRG 1332
>gb|AAM08845.1|AC113337_9 Putative retroelement [Oryza sativa Japonica Group]
Length = 1728
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/85 (43%), Positives = 52/85 (61%)
Frame = +1
Query: 1 HYHPGKANVVADALSRKSRGVLATHRVAVTDLVRQFSELDLTEVGQTQRGILVSLIAQSP 180
HYHPGKANVVADALSRKS R +L +Q L+L+ VG RG L +L A+
Sbjct: 1263 HYHPGKANVVADALSRKSHCNTLNVRGIPLELNQQMEALNLSIVG---RGFLAALEAKPT 1319
Query: 181 LVERIKESQMEDQYLRSIASELELG 255
L+++I+E+Q D +R + ++ G
Sbjct: 1320 LLDQIREAQKNDPDMRGLLKNMKQG 1344
>emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]
Length = 1573
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/85 (38%), Positives = 53/85 (62%)
Frame = +1
Query: 1 HYHPGKANVVADALSRKSRGVLATHRVAVTDLVRQFSELDLTEVGQTQRGILVSLIAQSP 180
HYHPGKANVVADALSRKS G L + + ++ + +L V + + L S+ A+
Sbjct: 1082 HYHPGKANVVADALSRKSYGQLFSLGLREFEMYAVIEDFELCLVQEGRGPCLYSISARPM 1141
Query: 181 LVERIKESQMEDQYLRSIASELELG 255
+++RI E+Q+ D++L + ++L G
Sbjct: 1142 VIQRIVEAQVHDEFLEKVKAQLVAG 1166
>gb|AAP52358.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1707
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/85 (43%), Positives = 52/85 (61%)
Frame = +1
Query: 1 HYHPGKANVVADALSRKSRGVLATHRVAVTDLVRQFSELDLTEVGQTQRGILVSLIAQSP 180
HYHPGKANVVADALSRKS R +L +Q L+L+ VG RG L +L A+
Sbjct: 1242 HYHPGKANVVADALSRKSHCNTLNVRGIPLELNQQMEALNLSIVG---RGFLAALEAKPT 1298
Query: 181 LVERIKESQMEDQYLRSIASELELG 255
L+++I+E+Q D +R + ++ G
Sbjct: 1299 LLDQIREAQKNDPDMRGLLKNMKQG 1323
>gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]
Length = 2037
Score = 63.9 bits (154), Expect = 2e-08
Identities = 40/92 (43%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Frame = +1
Query: 1 HYHPGKANVVADALSRKSRGVLATHRVAVTDLVRQFSEL-------DLTEVGQTQRGILV 159
HYHPGKANVVADALSRKS G LA + L+R+ EL DL+E G ++
Sbjct: 1887 HYHPGKANVVADALSRKSSGSLAHIQEVRRPLIRELHELVDEGVRFDLSEAG----AMIA 1942
Query: 160 SLIAQSPLVERIKESQMEDQYLRSIASELELG 255
+S L ++IK +Q +D L I +E+E G
Sbjct: 1943 HFQVKSDLFDKIKAAQKKDDSLLRIRNEVEQG 1974
>emb|CAE04382.1| OSJNBa0027G07.24 [Oryza sativa Japonica Group]
gi|38347091|emb|CAE02563.2| OSJNBa0006M15.6 [Oryza sativa
Japonica Group]
Length = 1635
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/85 (43%), Positives = 52/85 (61%)
Frame = +1
Query: 1 HYHPGKANVVADALSRKSRGVLATHRVAVTDLVRQFSELDLTEVGQTQRGILVSLIAQSP 180
HYHPGKANVVADALSRKS R +L +Q L+L+ VG RG L +L A+
Sbjct: 1154 HYHPGKANVVADALSRKSHCNTLNVRGIPPELNQQMEALNLSIVG---RGFLAALEAKPT 1210
Query: 181 LVERIKESQMEDQYLRSIASELELG 255
L+++I+E+Q D +R + ++ G
Sbjct: 1211 LLDQIREAQKNDPDMRGLLKNMKQG 1235
>emb|CAE02460.1| OSJNBa0042D13.13 [Oryza sativa Japonica Group]
Length = 784
Score = 63.9 bits (154), Expect = 2e-08
Identities = 38/85 (44%), Positives = 52/85 (61%)
Frame = +1
Query: 1 HYHPGKANVVADALSRKSRGVLATHRVAVTDLVRQFSELDLTEVGQTQRGILVSLIAQSP 180
HYHPGKANVVADALSRKSR R +L +Q L+L+ VG RG L +L A+
Sbjct: 306 HYHPGKANVVADALSRKSRCNTLGVRGIPPELHQQMEALNLSIVG---RGFLATLEAKPT 362
Query: 181 LVERIKESQMEDQYLRSIASELELG 255
L+++I+E+Q D + I ++ G
Sbjct: 363 LLDQIREAQKNDPDMHGILKNMKQG 387
>gb|ABA99219.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 2360
Score = 63.5 bits (153), Expect = 3e-08
Identities = 34/85 (40%), Positives = 51/85 (60%)
Frame = +1
Query: 1 HYHPGKANVVADALSRKSRGVLATHRVAVTDLVRQFSELDLTEVGQTQRGILVSLIAQSP 180
HYHPGKANVVADALSRK R +L ++F L+L VG RG + +L A+
Sbjct: 871 HYHPGKANVVADALSRKGHCNATEGRQLPLELCKEFERLNLGIVG---RGFVAALEAKPT 927
Query: 181 LVERIKESQMEDQYLRSIASELELG 255
L+++++E+Q+ D ++ I + G
Sbjct: 928 LIDQVREAQINDPDIQEIKKNMRRG 952
>gb|AAX95202.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77549495|gb|ABA92292.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1795
Score = 63.5 bits (153), Expect = 3e-08
Identities = 37/85 (43%), Positives = 50/85 (58%)
Frame = +1
Query: 1 HYHPGKANVVADALSRKSRGVLATHRVAVTDLVRQFSELDLTEVGQTQRGILVSLIAQSP 180
HYHPGKANVVADALSRKS R +L +Q L+L VG RG L +L AQ
Sbjct: 1253 HYHPGKANVVADALSRKSHCNTLNVRSIPPELNQQMEALNLNIVG---RGFLAALEAQPT 1309
Query: 181 LVERIKESQMEDQYLRSIASELELG 255
L+++I+E+Q D + + ++ G
Sbjct: 1310 LLDQIREAQKNDPDMHGLLKNMKQG 1334
>gb|ABA95988.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 705
Score = 63.5 bits (153), Expect = 3e-08
Identities = 37/85 (43%), Positives = 52/85 (61%)
Frame = +1
Query: 1 HYHPGKANVVADALSRKSRGVLATHRVAVTDLVRQFSELDLTEVGQTQRGILVSLIAQSP 180
HYHPGKANVVADALSRKS R +L +Q L+L+ VG RG L +L A+
Sbjct: 201 HYHPGKANVVADALSRKSHCNTLNVRGFPPELNQQMEALNLSIVG---RGFLAALEAKPT 257
Query: 181 LVERIKESQMEDQYLRSIASELELG 255
L+++I+E+Q D +R + ++ G
Sbjct: 258 LLDQIREAQKNDPDMRGLLKNMKQG 282
>emb|CAH67735.1| H0522A01.6 [Oryza sativa Indica Group] gi|116310748|emb|CAH67543.1|
H0425E08.11 [Oryza sativa Indica Group]
Length = 1475
Score = 63.5 bits (153), Expect = 3e-08
Identities = 34/85 (40%), Positives = 52/85 (61%)
Frame = +1
Query: 1 HYHPGKANVVADALSRKSRGVLATHRVAVTDLVRQFSELDLTEVGQTQRGILVSLIAQSP 180
HYHPGKANVVADALSRK + R +L ++F L+L VG RG + +L A+
Sbjct: 933 HYHPGKANVVADALSRKGYCNVTEGRQLPLELCKEFERLNLGIVG---RGFVAALEAKPT 989
Query: 181 LVERIKESQMEDQYLRSIASELELG 255
L+++++E+Q+ D ++ I + G
Sbjct: 990 LIDQVREAQVNDPDIQEIKKNMRRG 1014
>emb|CAD40062.3| OSJNBa0085C10.14 [Oryza sativa Japonica Group]
Length = 756
Score = 63.5 bits (153), Expect = 3e-08
Identities = 34/85 (40%), Positives = 49/85 (57%)
Frame = +1
Query: 1 HYHPGKANVVADALSRKSRGVLATHRVAVTDLVRQFSELDLTEVGQTQRGILVSLIAQSP 180
HYHPGKANVVADALSRK R +L ++F L+L G RG + +L A+
Sbjct: 400 HYHPGKANVVADALSRKGYSNATEGRQLPLELCKEFERLNL---GIISRGFVAALEAKPT 456
Query: 181 LVERIKESQMEDQYLRSIASELELG 255
L+E+++E+Q+ D + I + G
Sbjct: 457 LIEQVREAQINDPDIHEIKKNMRRG 481