BLASTX nr result

ID: Zingiber23_contig00050363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00050363
         (428 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB45089.1| Flap endonuclease GEN-like 1 [Morus notabilis]          38   2e-06
gb|EXC33535.1| Flap endonuclease GEN-like 1 [Morus notabilis]          37   5e-06
gb|EMJ20325.1| hypothetical protein PRUPE_ppa015861mg [Prunus pe...    37   7e-06

>gb|EXB45089.1| Flap endonuclease GEN-like 1 [Morus notabilis]
          Length = 606

 Score = 37.7 bits (86), Expect(3) = 2e-06
 Identities = 21/37 (56%), Positives = 27/37 (72%), Gaps = 3/37 (8%)
 Frame = -1

Query: 371 AVDLTSYWIVQHDAVIR--RRNPHLRSTFC-TVALFS 270
           A+DL S+WIVQH+  ++   RNPHLR TF  T+ LFS
Sbjct: 29  AIDL-SFWIVQHETALKSNARNPHLRLTFFRTINLFS 64



 Score = 31.6 bits (70), Expect(3) = 2e-06
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = -3

Query: 426 DLLKPYARNEGVDF 385
           DLLKPYARNEG DF
Sbjct: 9   DLLKPYARNEGFDF 22



 Score = 26.6 bits (57), Expect(3) = 2e-06
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 151 RFGADPVFTVDEEASPLK 98
           +FGA PVF +D   SPLK
Sbjct: 65  KFGAFPVFVIDGTPSPLK 82


>gb|EXC33535.1| Flap endonuclease GEN-like 1 [Morus notabilis]
          Length = 661

 Score = 36.6 bits (83), Expect(3) = 5e-06
 Identities = 20/36 (55%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
 Frame = -1

Query: 368 VDLTSYWIVQHDAVIR--RRNPHLRSTFC-TVALFS 270
           +DL S+WIVQH+  ++   RNPHLR TF  T+ LFS
Sbjct: 30  IDL-SFWIVQHETALKSNARNPHLRLTFLRTINLFS 64



 Score = 31.6 bits (70), Expect(3) = 5e-06
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = -3

Query: 426 DLLKPYARNEGVDF 385
           DLLKPYARNEG DF
Sbjct: 9   DLLKPYARNEGFDF 22



 Score = 26.6 bits (57), Expect(3) = 5e-06
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 151 RFGADPVFTVDEEASPLK 98
           +FGA PVF +D   SPLK
Sbjct: 65  KFGAFPVFVIDGTPSPLK 82


>gb|EMJ20325.1| hypothetical protein PRUPE_ppa015861mg [Prunus persica]
          Length = 611

 Score = 37.4 bits (85), Expect(3) = 7e-06
 Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 3/37 (8%)
 Frame = -1

Query: 371 AVDLTSYWIVQHDAVI--RRRNPHLRSTFC-TVALFS 270
           AVDL S+W+VQH+  I  R R+PHLR TF  T+ LFS
Sbjct: 29  AVDL-SFWLVQHETAIKDRARSPHLRLTFFRTINLFS 64



 Score = 29.6 bits (65), Expect(3) = 7e-06
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -3

Query: 426 DLLKPYARNEGVDF 385
           DLLKPYAR+EG DF
Sbjct: 9   DLLKPYARHEGFDF 22



 Score = 27.3 bits (59), Expect(3) = 7e-06
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -2

Query: 151 RFGADPVFTVDEEASPLK 98
           +FGA PVF VD   SPLK
Sbjct: 65  KFGAFPVFVVDGSPSPLK 82


Top