BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00050275
         (376 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325015.2| hypothetical protein POPTR_0018s09200g [Popu...    67   2e-09
ref|XP_002514252.1| RING-H2 finger protein ATL4J precursor, puta...    65   7e-09
gb|EOY30701.1| RING/U-box superfamily protein, putative [Theobro...    62   8e-08
ref|XP_003517066.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    60   4e-07
ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    59   9e-07
gb|EMJ05693.1| hypothetical protein PRUPE_ppa019638mg [Prunus pe...    57   2e-06
ref|XP_006494326.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    57   2e-06
ref|XP_006451246.1| hypothetical protein CICLE_v10010254mg [Citr...    57   2e-06
ref|XP_006282599.1| hypothetical protein CARUB_v10004771mg, part...    57   2e-06
ref|XP_006853596.1| hypothetical protein AMTR_s00056p00027410 [A...    56   6e-06
ref|NP_194618.3| E3 ubiquitin-protein ligase ATL42 [Arabidopsis ...    55   7e-06
gb|AAU84668.1| At4g28890 [Arabidopsis thaliana] gi|55167896|gb|A...    55   7e-06
gb|EXC15876.1| E3 ubiquitin-protein ligase ATL42 [Morus notabilis]     55   9e-06

>ref|XP_002325015.2| hypothetical protein POPTR_0018s09200g [Populus trichocarpa]
           gi|550318374|gb|EEF03580.2| hypothetical protein
           POPTR_0018s09200g [Populus trichocarpa]
          Length = 427

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 45/126 (35%), Positives = 62/126 (49%), Gaps = 2/126 (1%)
 Frame = -1

Query: 376 IGSNFRRTGKKGMEKD-GIRAEEEG-DNAAQYFHKYKHRIVVSDVMSRGRWSDVNXXXXX 203
           +GS+FR +GK   E++  I+ E EG DN  + F+K+KH+I+VSDV+ + RWS  +     
Sbjct: 209 VGSSFRTSGKVSKEEELWIKEEVEGSDNDQKIFNKFKHKIIVSDVVLKNRWSSASSSDLM 268

Query: 202 XXXXXXXXXXXSKRFSEEDFNLEHDGAEIHRDDNGGDKISATDEKILTIKREMEKKRLLE 23
                      S RF   D            D+         DEK L IK E+E KRLLE
Sbjct: 269 FLNSEMLHDMSSNRFHTPDL-----------DEESTANRGIEDEKFLKIKEEIEMKRLLE 317

Query: 22  LKVRQI 5
            KV  +
Sbjct: 318 SKVSPV 323


>ref|XP_002514252.1| RING-H2 finger protein ATL4J precursor, putative [Ricinus communis]
           gi|223546708|gb|EEF48206.1| RING-H2 finger protein ATL4J
           precursor, putative [Ricinus communis]
          Length = 267

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
 Frame = -1

Query: 376 IGSNFRRTGKK-GMEKDGIRAEEEG---DNAAQYFHKYKHRIVVSDVMSRGRWSDVNXXX 209
           IGS+FRRT K    +++ +  E+E    D+  +  HK+ H+I++SDV+ + RWS+V+   
Sbjct: 47  IGSSFRRTDKVLNKDEEALIQEQEAEDSDDEQRVLHKFNHKIIISDVVLKNRWSNVSSSD 106

Query: 208 XXXXXXXXXXXXXSKRFSEEDFNLEHDGAEIHRDDNGGDKISATDEKILTIKREMEKKRL 29
                        S RFS  D N E               IS  +E+++ IK EMEKKRL
Sbjct: 107 LMFLNAEMLQDMSSNRFSSSDSNNE-------------QFISTENEQMVKIKEEMEKKRL 153

Query: 28  LELKVRQI 5
            E K   I
Sbjct: 154 FESKFSTI 161


>gb|EOY30701.1| RING/U-box superfamily protein, putative [Theobroma cacao]
          Length = 426

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 43/126 (34%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
 Frame = -1

Query: 376 IGSNFRRTGKKGMEKDGIRAEE--EGDNAAQYFHKYKHRIVVSDVMSRGRWSDVNXXXXX 203
           IGS+ R+  K  +E + +  EE  + D+  + FHK+KH+I+VSDV+ + RWS V+     
Sbjct: 208 IGSSSRKIEKGNIENEVLIQEEAADEDDDGRVFHKFKHKIIVSDVVLKNRWSSVSSSDLM 267

Query: 202 XXXXXXXXXXXSKRFSEEDFNLEHDGAEIHRDDNGGDKISATDEKILTIKREMEKKRLLE 23
                      S RFS  + N +H  + I R           +++I+ IK E+E KRL E
Sbjct: 268 FLNSEMLNEMSSNRFSSLETN-DHGQSTITR--------PIENKQIMKIKEELEIKRLFE 318

Query: 22  LKVRQI 5
            KV  I
Sbjct: 319 SKVSSI 324


>ref|XP_003517066.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Glycine max]
          Length = 426

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
 Frame = -1

Query: 373 GSNFRRTGKKGMEKDGI--RAEEEGDNAAQYFHKYKHRIVVSDVMSRGRWSDVNXXXXXX 200
           GS+FR+TGK   E++ +  +  E+ D   + +HK+ HRI +SDV+ + RWS+V+      
Sbjct: 207 GSSFRKTGKYVKEEEFLIEKGAEDSDGNQKGYHKHNHRITISDVVFKHRWSNVSSSDLMF 266

Query: 199 XXXXXXXXXXSKRFSEEDFNLEHDGAEIHRDDNGGDKISAT-----DEKILTIKREMEKK 35
                     S RFS    NLE          +  D +S+T     +E+I+ IK EME+K
Sbjct: 267 LNSEMLNDASSNRFS----NLE----------SNADMMSSTRGVVENEQIMNIKEEMERK 312

Query: 34  RLLELKV 14
              E KV
Sbjct: 313 ISFESKV 319


>ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42 [Vitis vinifera]
          Length = 423

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
 Frame = -1

Query: 376 IGSNFRRTGKKGMEKDGIRAEEEGDNA--AQYFHKYKHRIVVSDVMSRGRWSDVNXXXXX 203
           IGS+FR+  K   E++ +  +EE D+    +  HK  H+I+VSDV+ + RWS V+     
Sbjct: 208 IGSSFRKVEKGVKEEESVLIQEEEDDNDDEKILHKINHKIIVSDVVLKNRWSSVSSSDLM 267

Query: 202 XXXXXXXXXXXSKRFSEEDFNLEHDGAEIHRDDNGGDKISATDEKILTIKREMEKKRLLE 23
                      S RF+  D N    G  I             D +++ IK E+E+KR+ E
Sbjct: 268 YLNSELVHAMSSDRFASLDSNNSAMGRPIE------------DWEVMKIKEEIERKRIFE 315

Query: 22  LKVRQI 5
            +V +I
Sbjct: 316 SRVSRI 321


>gb|EMJ05693.1| hypothetical protein PRUPE_ppa019638mg [Prunus persica]
          Length = 418

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
 Frame = -1

Query: 376 IGSNFRRTGKKGMEKDGIRAEEEGDNAAQ----YFHKYKHRIVVSDVMSRGRWSDVNXXX 209
           IGS+FR+T K   +++ +   EEG + ++      HK+KH+IVVSD+  + RWS+V+   
Sbjct: 207 IGSSFRKTEKAVDKEEELLILEEGADMSKEDQKILHKHKHKIVVSDLEFKNRWSNVSSSD 266

Query: 208 XXXXXXXXXXXXXSKRFSEEDFNLEHDGAEIHRDDNGGDKISATDEKILTIKREMEKKRL 29
                        S RFS     L H+ A            +  +E+I+ I+ EME KRL
Sbjct: 267 LMFLNSEMLNTMSSNRFSSA--RLNHEPA-----------TATGNEEIMKIREEMEMKRL 313

Query: 28  LELKV 14
            E KV
Sbjct: 314 FENKV 318


>ref|XP_006494326.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Citrus sinensis]
          Length = 428

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 42/127 (33%), Positives = 59/127 (46%), Gaps = 3/127 (2%)
 Frame = -1

Query: 376 IGSNFRRTGKKGMEKDGIRAEE--EGDNAAQYFHKYKHRIVVSDVMSRGRWSDVNXXXXX 203
           IGS+FR+  +   E++ +  EE  +GD+  +  HK+ H+I+VSDV+ + RWS  +     
Sbjct: 208 IGSSFRKNKEPNKEEELLIQEEAVDGDDDERILHKHNHKIIVSDVIFKNRWSSASSSDLM 267

Query: 202 XXXXXXXXXXXSKRFSE-EDFNLEHDGAEIHRDDNGGDKISATDEKILTIKREMEKKRLL 26
                      S RFS   DF        I             +E+IL IK EME KRL 
Sbjct: 268 LLNSELINDMSSNRFSNPNDFGQFSTKRAIE-----------NNEQILKIKEEMEMKRLF 316

Query: 25  ELKVRQI 5
           E K   I
Sbjct: 317 ENKFSTI 323


>ref|XP_006451246.1| hypothetical protein CICLE_v10010254mg [Citrus clementina]
           gi|557554472|gb|ESR64486.1| hypothetical protein
           CICLE_v10010254mg [Citrus clementina]
          Length = 415

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 42/127 (33%), Positives = 59/127 (46%), Gaps = 3/127 (2%)
 Frame = -1

Query: 376 IGSNFRRTGKKGMEKDGIRAEE--EGDNAAQYFHKYKHRIVVSDVMSRGRWSDVNXXXXX 203
           IGS+FR+  +   E++ +  EE  +GD+  +  HK+ H+I+VSDV+ + RWS  +     
Sbjct: 195 IGSSFRKNKEPNKEEELLIQEEAVDGDDDERILHKHNHKIIVSDVIFKNRWSSASSSDLM 254

Query: 202 XXXXXXXXXXXSKRFSE-EDFNLEHDGAEIHRDDNGGDKISATDEKILTIKREMEKKRLL 26
                      S RFS   DF        I             +E+IL IK EME KRL 
Sbjct: 255 LLNSELINDMSSNRFSNPNDFGQFSTKRAIE-----------NNEQILKIKEEMEMKRLF 303

Query: 25  ELKVRQI 5
           E K   I
Sbjct: 304 ENKFSTI 310


>ref|XP_006282599.1| hypothetical protein CARUB_v10004771mg, partial [Capsella rubella]
           gi|482551304|gb|EOA15497.1| hypothetical protein
           CARUB_v10004771mg, partial [Capsella rubella]
          Length = 458

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
 Frame = -1

Query: 376 IGSNFRRTGKKGMEKDGIRAEEEGD-NAAQYFHKYKHRIVVSDVMSRGRWSDVNXXXXXX 200
           IG +FR+  K G ++  +  ++  D +  +  HK+ HRIVVSDV+ + RWS+V+      
Sbjct: 250 IGGSFRKILKLGNKEKTLLDQQVNDKDEKKLMHKFNHRIVVSDVVFKNRWSNVSSSDLMF 309

Query: 199 XXXXXXXXXXSKRFSEEDFNLEHDGAEIHRDDNGGDKISATDEKILTIKREMEKKRLLEL 20
                     S+RF+  D         + R  +  D+I      IL IK EME KR+LE 
Sbjct: 310 LNSEMVNSISSERFTSID--------RVKRKGDEEDQIG-----ILGIKEEMEAKRMLEN 356

Query: 19  KVRQIK 2
           K+  +K
Sbjct: 357 KLTSLK 362


>ref|XP_006853596.1| hypothetical protein AMTR_s00056p00027410 [Amborella trichopoda]
           gi|548857257|gb|ERN15063.1| hypothetical protein
           AMTR_s00056p00027410 [Amborella trichopoda]
          Length = 489

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 25/123 (20%)
 Frame = -1

Query: 295 AQYFHKYKHRIVVSDVMSRGRWSDVNXXXXXXXXXXXXXXXXSKRF---------SEEDF 143
           ++ FHK+KH+I+VSD +SR RWSDVN                SKRF         S   F
Sbjct: 270 SESFHKFKHKIIVSDFVSRHRWSDVNASDLLFLNSELLASVSSKRFGSVLDFGSVSSRRF 329

Query: 142 NLEHDGAEI--------------HRDDNGGDKI--SATDEKILTIKREMEKKRLLELKVR 11
             + D   +               RD +  D +    ++ +IL I+ EME+KR+LE+K  
Sbjct: 330 KADADLGSVPSTRFGMGSDRGFRTRDSSDVDVVQRGGSNGEILRIREEMERKRILEIKAE 389

Query: 10  QIK 2
           +++
Sbjct: 390 RVR 392


>ref|NP_194618.3| E3 ubiquitin-protein ligase ATL42 [Arabidopsis thaliana]
           gi|68565150|sp|Q5XF85.2|ATL42_ARATH RecName: Full=E3
           ubiquitin-protein ligase ATL42; AltName: Full=RING-H2
           finger protein ATL42; Flags: Precursor
           gi|4972078|emb|CAB43903.1| putative protein [Arabidopsis
           thaliana] gi|7269744|emb|CAB81477.1| putative protein
           [Arabidopsis thaliana] gi|66865954|gb|AAY57611.1| RING
           finger family protein [Arabidopsis thaliana]
           gi|332660159|gb|AEE85559.1| E3 ubiquitin-protein ligase
           ATL42 [Arabidopsis thaliana]
          Length = 432

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 44/122 (36%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
 Frame = -1

Query: 376 IGSNFRRTGKKGMEKDGIRAEEEGD-NAAQYFHKYKHRIVVSDVMSRGRWSDVNXXXXXX 200
           IG +FR+  K G ++  +  E   D +  +  HK+ HRIVVSDV+ + RWS+V+      
Sbjct: 223 IGESFRKILKLGNKEKTLLDEHVNDKDEKKLMHKFNHRIVVSDVVFKNRWSNVSSSDLMF 282

Query: 199 XXXXXXXXXXSKRFSEEDFNLEHDGAEIHRDDNGGDKISATDEKILTIKREMEKKRLLEL 20
                     S+RFS    +L+H    + R D   D+I      IL IK EME KR+LE 
Sbjct: 283 LNSEMVNSISSERFS----SLDH----VKRGDE-EDQIG-----ILRIKEEMEAKRMLEN 328

Query: 19  KV 14
           K+
Sbjct: 329 KL 330


>gb|AAU84668.1| At4g28890 [Arabidopsis thaliana] gi|55167896|gb|AAV43780.1|
           At4g28890 [Arabidopsis thaliana]
          Length = 386

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 44/122 (36%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
 Frame = -1

Query: 376 IGSNFRRTGKKGMEKDGIRAEEEGD-NAAQYFHKYKHRIVVSDVMSRGRWSDVNXXXXXX 200
           IG +FR+  K G ++  +  E   D +  +  HK+ HRIVVSDV+ + RWS+V+      
Sbjct: 177 IGESFRKILKLGNKEKTLLDEHVNDKDEKKLMHKFNHRIVVSDVVFKNRWSNVSSSDLMF 236

Query: 199 XXXXXXXXXXSKRFSEEDFNLEHDGAEIHRDDNGGDKISATDEKILTIKREMEKKRLLEL 20
                     S+RFS    +L+H    + R D   D+I      IL IK EME KR+LE 
Sbjct: 237 LNSEMVNSISSERFS----SLDH----VKRGDE-EDQIG-----ILRIKEEMEAKRMLEN 282

Query: 19  KV 14
           K+
Sbjct: 283 KL 284


>gb|EXC15876.1| E3 ubiquitin-protein ligase ATL42 [Morus notabilis]
          Length = 441

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
 Frame = -1

Query: 376 IGSNFRRTGKKGMEKDG---IRAEEEGDNAAQYFHKYKHRIVVSDVMSRGRWSDVNXXXX 206
           IGS+FR+  +KG  K+    I+ E E D   + FHK+ H+I+VSD + + RWS+V+    
Sbjct: 222 IGSSFRKIHEKGHHKEEELLIQQETEADQ--KVFHKHNHKILVSDFVFKNRWSNVSSSDL 279

Query: 205 XXXXXXXXXXXXSKRFSEEDFNLEHDGAEIHRDDNGGDKISATDEKILTIKREMEKKRLL 26
                       S RF+  D+N          +D    + +  + +++  K EME K+  
Sbjct: 280 IFLSSEMLNDKSSGRFASTDWN----------NDPTSTRKAVENGEMMKTKEEMEMKKSF 329

Query: 25  ELKVRQI 5
           E KV  I
Sbjct: 330 ESKVGTI 336