BLASTX nr result

ID: Zingiber23_contig00050184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00050184
         (295 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like...    58   1e-06
emb|CBI23610.3| unnamed protein product [Vitis vinifera]               58   1e-06
emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]    58   1e-06
ref|XP_004167994.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 fing...    56   6e-06
ref|XP_004142260.1| PREDICTED: RING-H2 finger protein ATL16-like...    56   6e-06
gb|ESW34528.1| hypothetical protein PHAVU_001G160000g [Phaseolus...    55   1e-05

>ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like [Vitis vinifera]
          Length = 359

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/52 (51%), Positives = 36/52 (69%)
 Frame = -2

Query: 276 RKIEFSGSRGDECIDAGKKEEKLRLQPLRRSFSADSSGDMLLHVALQRILQK 121
           RK     S GDECID   K+++  +QP+RRSFS DSS D  L++A+Q ILQ+
Sbjct: 267 RKFHHVASMGDECIDTRGKDDQFSIQPIRRSFSMDSSNDRQLYLAIQEILQQ 318


>emb|CBI23610.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/52 (51%), Positives = 36/52 (69%)
 Frame = -2

Query: 276 RKIEFSGSRGDECIDAGKKEEKLRLQPLRRSFSADSSGDMLLHVALQRILQK 121
           RK     S GDECID   K+++  +QP+RRSFS DSS D  L++A+Q ILQ+
Sbjct: 102 RKFHHVASMGDECIDTRGKDDQFSIQPIRRSFSMDSSNDRQLYLAIQEILQQ 153


>emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]
          Length = 419

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/52 (51%), Positives = 36/52 (69%)
 Frame = -2

Query: 276 RKIEFSGSRGDECIDAGKKEEKLRLQPLRRSFSADSSGDMLLHVALQRILQK 121
           RK     S GDECID   K+++  +QP+RRSFS DSS D  L++A+Q ILQ+
Sbjct: 327 RKFHHVASMGDECIDTRGKDDQFSIQPIRRSFSMDSSNDRQLYLAIQEILQQ 378


>ref|XP_004167994.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 finger protein ATL16-like
           [Cucumis sativus]
          Length = 307

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/58 (44%), Positives = 41/58 (70%)
 Frame = -2

Query: 294 QIRDEERKIEFSGSRGDECIDAGKKEEKLRLQPLRRSFSADSSGDMLLHVALQRILQK 121
           ++   ERK +   S GDECI+  +K+E+  +QP+RRSFS DSSGD  L++A+Q  +++
Sbjct: 209 EVAKSERKFKKVTSMGDECINMREKDEEFIVQPIRRSFSMDSSGDRQLYMAVQAAVRE 266


>ref|XP_004142260.1| PREDICTED: RING-H2 finger protein ATL16-like [Cucumis sativus]
          Length = 307

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/58 (44%), Positives = 41/58 (70%)
 Frame = -2

Query: 294 QIRDEERKIEFSGSRGDECIDAGKKEEKLRLQPLRRSFSADSSGDMLLHVALQRILQK 121
           ++   ERK +   S GDECI+  +K+E+  +QP+RRSFS DSSGD  L++A+Q  +++
Sbjct: 209 EVAKSERKFKKVTSMGDECINMREKDEEFIVQPIRRSFSMDSSGDRQLYMAVQAAVRE 266


>gb|ESW34528.1| hypothetical protein PHAVU_001G160000g [Phaseolus vulgaris]
          Length = 317

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/52 (48%), Positives = 35/52 (67%)
 Frame = -2

Query: 276 RKIEFSGSRGDECIDAGKKEEKLRLQPLRRSFSADSSGDMLLHVALQRILQK 121
           RK       GDECID GKK+E+  +QP+RRSFS DS+ D  +++  Q I+Q+
Sbjct: 250 RKCHHVSIMGDECIDVGKKDEQFSIQPIRRSFSMDSANDRQVYLDFQIIMQQ 301


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