BLASTX nr result
ID: Zingiber23_contig00050096
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00050096
(335 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_005435459.1| PREDICTED: ATP-dependent RNA helicase DQX1 [... 75 9e-12
ref|XP_005239558.1| PREDICTED: ATP-dependent RNA helicase DQX1 [... 75 9e-12
ref|XP_004080617.1| PREDICTED: putative pre-mRNA-splicing factor... 73 3e-11
ref|XP_003643213.1| PREDICTED: ATP-dependent RNA helicase DQX1 [... 73 3e-11
ref|XP_006005307.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen... 72 6e-11
ref|XP_004612057.1| PREDICTED: ATP-dependent RNA helicase DQX1 [... 72 6e-11
ref|XP_002320963.2| hypothetical protein POPTR_0014s11320g [Popu... 71 2e-10
ref|XP_005518010.1| PREDICTED: ATP-dependent RNA helicase DQX1-l... 70 2e-10
ref|XP_005045722.1| PREDICTED: ATP-dependent RNA helicase DQX1 i... 70 2e-10
ref|XP_005045721.1| PREDICTED: ATP-dependent RNA helicase DQX1 i... 70 2e-10
ref|XP_005278486.1| PREDICTED: ATP-dependent RNA helicase DQX1 [... 70 3e-10
ref|XP_005139720.1| PREDICTED: putative pre-mRNA-splicing factor... 70 3e-10
ref|XP_002709666.1| PREDICTED: DEAQ box polypeptide 1 (RNA-depen... 70 3e-10
ref|XP_001609083.1| pre-mRNA splicing factor RNA helicase [Babes... 70 3e-10
gb|EMJ20628.1| hypothetical protein PRUPE_ppa020570mg, partial [... 70 4e-10
ref|NP_001088262.1| putative pre-mRNA-splicing factor ATP-depend... 70 4e-10
ref|XP_001755545.1| predicted protein [Physcomitrella patens] gi... 70 4e-10
ref|XP_005794841.1| PREDICTED: putative pre-mRNA-splicing factor... 69 5e-10
ref|XP_006845501.1| hypothetical protein AMTR_s00019p00154740 [A... 69 5e-10
ref|XP_003793413.1| PREDICTED: ATP-dependent RNA helicase DQX1 [... 69 5e-10
>ref|XP_005435459.1| PREDICTED: ATP-dependent RNA helicase DQX1 [Falco cherrug]
Length = 1007
Score = 75.1 bits (183), Expect = 9e-12
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Frame = -2
Query: 205 DPAMADEEAKEVNPATGWPFSRRYHKLLQRRKNLPVWADRSKFLDALAKNQ-VVIVAAPP 29
DPA+ + EVNP G PFS RY++LL++R+ LPVW + F++ L N +++V+ PP
Sbjct: 29 DPALGCDSDLEVNPYDGLPFSSRYYELLRQRRELPVWTTKYSFMEHLEGNSGIILVSGPP 88
Query: 28 GSGKSTQIP 2
G+GKSTQIP
Sbjct: 89 GTGKSTQIP 97
>ref|XP_005239558.1| PREDICTED: ATP-dependent RNA helicase DQX1 [Falco peregrinus]
Length = 744
Score = 75.1 bits (183), Expect = 9e-12
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Frame = -2
Query: 205 DPAMADEEAKEVNPATGWPFSRRYHKLLQRRKNLPVWADRSKFLDALAKNQ-VVIVAAPP 29
DPA+ + EVNP G PFS RY++LL++R+ LPVW + F++ L N +++V+ PP
Sbjct: 29 DPALGCDSDLEVNPYDGLPFSSRYYELLRQRRELPVWTTKYSFMEHLEGNSGIILVSGPP 88
Query: 28 GSGKSTQIP 2
G+GKSTQIP
Sbjct: 89 GTGKSTQIP 97
>ref|XP_004080617.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX32-like [Oryzias latipes]
Length = 760
Score = 73.2 bits (178), Expect = 3e-11
Identities = 33/58 (56%), Positives = 45/58 (77%)
Frame = -2
Query: 175 EVNPATGWPFSRRYHKLLQRRKNLPVWADRSKFLDALAKNQVVIVAAPPGSGKSTQIP 2
E+NP G PFS RY+KLL++RK LPVW RS+F ++L NQ+V+V+A SG+STQ+P
Sbjct: 59 ELNPFDGLPFSSRYYKLLKKRKTLPVWKVRSQFEESLVNNQLVVVSATAKSGRSTQVP 116
>ref|XP_003643213.1| PREDICTED: ATP-dependent RNA helicase DQX1 [Gallus gallus]
Length = 743
Score = 73.2 bits (178), Expect = 3e-11
Identities = 33/69 (47%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = -2
Query: 205 DPAMADEEAKEVNPATGWPFSRRYHKLLQRRKNLPVWADRSKFLDAL-AKNQVVIVAAPP 29
DPA+ + EVNP G PFS RY++LL++R+ LPVW + F++ L + + +V+V+ PP
Sbjct: 28 DPALGCDGDLEVNPYDGLPFSSRYYELLRQRRELPVWTTKYSFMEHLESSSGIVLVSGPP 87
Query: 28 GSGKSTQIP 2
G+GKSTQ+P
Sbjct: 88 GTGKSTQVP 96
>ref|XP_006005307.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DQX1-like [Latimeria chalumnae]
Length = 715
Score = 72.4 bits (176), Expect = 6e-11
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
Frame = -2
Query: 223 SSSPIADPAMADEEAK------EVNPATGWPFSRRYHKLLQRRKNLPVWADRSKFLDALA 62
S +P DP DE+A EVNP G PFS RY++LL++RK L VW + FL++L
Sbjct: 25 SLNPDGDPEEEDEDALVCDADLEVNPYDGLPFSSRYYELLKQRKELAVWGVKYGFLESLE 84
Query: 61 KNQVVIVAAPPGSGKSTQI 5
+ VV+V+ PGSGKSTQ+
Sbjct: 85 SSSVVLVSGNPGSGKSTQV 103
>ref|XP_004612057.1| PREDICTED: ATP-dependent RNA helicase DQX1 [Sorex araneus]
Length = 723
Score = 72.4 bits (176), Expect = 6e-11
Identities = 39/76 (51%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
Frame = -2
Query: 220 SSPIADPAMADEEAK-EVNPATGWPFSRRYHKLLQRRKNLPVWADRSKFLDALAKNQ--V 50
S P P + EE++ VNP G PFS RY++LL+RR+ LP+WA R FL+ L + V
Sbjct: 6 SRPAEQPRGSPEESELAVNPFDGLPFSSRYYELLERRRALPIWAARFVFLEQLERGPGGV 65
Query: 49 VIVAAPPGSGKSTQIP 2
V+V+ PGSGKSTQIP
Sbjct: 66 VLVSGEPGSGKSTQIP 81
>ref|XP_002320963.2| hypothetical protein POPTR_0014s11320g [Populus trichocarpa]
gi|550323982|gb|EEE99278.2| hypothetical protein
POPTR_0014s11320g [Populus trichocarpa]
Length = 729
Score = 70.9 bits (172), Expect = 2e-10
Identities = 30/63 (47%), Positives = 45/63 (71%)
Frame = -2
Query: 190 DEEAKEVNPATGWPFSRRYHKLLQRRKNLPVWADRSKFLDALAKNQVVIVAAPPGSGKST 11
+E + +N G P+S+RY+++L++RKNLPVW + FL L KNQV+++ GSGK+T
Sbjct: 37 NEGSSSINRWNGKPYSQRYYEILEKRKNLPVWHQKEDFLQVLKKNQVLVLVGETGSGKTT 96
Query: 10 QIP 2
QIP
Sbjct: 97 QIP 99
>ref|XP_005518010.1| PREDICTED: ATP-dependent RNA helicase DQX1-like [Pseudopodoces
humilis]
Length = 740
Score = 70.5 bits (171), Expect = 2e-10
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Frame = -2
Query: 205 DPAMADEEAKEVNPATGWPFSRRYHKLLQRRKNLPVWADRSKFLDALAKNQ-VVIVAAPP 29
DP++ + EVNP G PFS RY++LL++R+ LPVW + F++ L N +V+V+ P
Sbjct: 28 DPSLGCDGDLEVNPYDGLPFSSRYYELLRQRRELPVWTTKYSFMEHLEGNSGIVLVSGAP 87
Query: 28 GSGKSTQIP 2
G+GKSTQIP
Sbjct: 88 GTGKSTQIP 96
>ref|XP_005045722.1| PREDICTED: ATP-dependent RNA helicase DQX1 isoform X2 [Ficedula
albicollis]
Length = 741
Score = 70.5 bits (171), Expect = 2e-10
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Frame = -2
Query: 205 DPAMADEEAKEVNPATGWPFSRRYHKLLQRRKNLPVWADRSKFLDALAKNQ-VVIVAAPP 29
D ++ + EVNP G PFS RY++LL++R+ LPVW + F++ L N +V+V+ PP
Sbjct: 28 DASLGCDGDLEVNPYDGLPFSSRYYELLRQRRELPVWTTKYSFMEHLEGNSGIVLVSGPP 87
Query: 28 GSGKSTQIP 2
G+GKSTQIP
Sbjct: 88 GTGKSTQIP 96
>ref|XP_005045721.1| PREDICTED: ATP-dependent RNA helicase DQX1 isoform X1 [Ficedula
albicollis]
Length = 768
Score = 70.5 bits (171), Expect = 2e-10
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Frame = -2
Query: 205 DPAMADEEAKEVNPATGWPFSRRYHKLLQRRKNLPVWADRSKFLDALAKNQ-VVIVAAPP 29
D ++ + EVNP G PFS RY++LL++R+ LPVW + F++ L N +V+V+ PP
Sbjct: 28 DASLGCDGDLEVNPYDGLPFSSRYYELLRQRRELPVWTTKYSFMEHLEGNSGIVLVSGPP 87
Query: 28 GSGKSTQIP 2
G+GKSTQIP
Sbjct: 88 GTGKSTQIP 96
>ref|XP_005278486.1| PREDICTED: ATP-dependent RNA helicase DQX1 [Chrysemys picta bellii]
Length = 752
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/59 (54%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = -2
Query: 175 EVNPATGWPFSRRYHKLLQRRKNLPVWADRSKFLDAL-AKNQVVIVAAPPGSGKSTQIP 2
EVNP G PFS RY++LLQRR++LP+WA + F++ L + + +V+V+ PG+GKSTQIP
Sbjct: 42 EVNPYDGLPFSSRYYELLQRRRDLPIWATKYSFMEHLESSSGIVLVSGGPGTGKSTQIP 100
>ref|XP_005139720.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX32-like, partial [Melopsittacus undulatus]
Length = 258
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/59 (54%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Frame = -2
Query: 175 EVNPATGWPFSRRYHKLLQRRKNLPVWADRSKFLDALAKNQ-VVIVAAPPGSGKSTQIP 2
EVNP G PFS RY++LL++R+ LPVW + F++ L N +V+V+ PPG+GKSTQIP
Sbjct: 13 EVNPYDGLPFSSRYYELLRQRRELPVWTTKYSFMEHLEGNSGIVLVSGPPGTGKSTQIP 71
>ref|XP_002709666.1| PREDICTED: DEAQ box polypeptide 1 (RNA-dependent ATPase)
[Oryctolagus cuniculus]
Length = 693
Score = 70.1 bits (170), Expect = 3e-10
Identities = 37/69 (53%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Frame = -2
Query: 202 PAMADEEAKEVNPATGWPFSRRYHKLLQRRKNLPVWADRSKFLDALAKNQ--VVIVAAPP 29
P+ D E VNP G PFS Y++LL+RR+ LP+WA R KFL+ L + VV+V+ P
Sbjct: 14 PSPGDSELA-VNPFDGLPFSSHYYELLERRRALPIWAARFKFLEQLESSPTGVVLVSGEP 72
Query: 28 GSGKSTQIP 2
GSGKSTQIP
Sbjct: 73 GSGKSTQIP 81
>ref|XP_001609083.1| pre-mRNA splicing factor RNA helicase [Babesia bovis T2Bo]
gi|154796333|gb|EDO05515.1| pre-mRNA splicing factor RNA
helicase, putative [Babesia bovis]
Length = 703
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Frame = -2
Query: 226 FSSSPIADPAMA------DEEAKEVNPATGWPFSRRYHKLLQRRKNLPVWADRSKFLDAL 65
FS +P+ D + DE ++N T P+S+RY+ +L++R+ LP W+ R F+ L
Sbjct: 13 FSDAPVTDTSSLKRSKPDDELCDDINRFTNLPYSQRYYTILEKRRELPAWSARKNFVKLL 72
Query: 64 AKNQVVIVAAPPGSGKSTQIP 2
+NQV+I+ GSGK+TQIP
Sbjct: 73 RRNQVIILVGETGSGKTTQIP 93
>gb|EMJ20628.1| hypothetical protein PRUPE_ppa020570mg, partial [Prunus persica]
Length = 695
Score = 69.7 bits (169), Expect = 4e-10
Identities = 29/57 (50%), Positives = 42/57 (73%)
Frame = -2
Query: 172 VNPATGWPFSRRYHKLLQRRKNLPVWADRSKFLDALAKNQVVIVAAPPGSGKSTQIP 2
+NP TG P+S+ Y+++L++RK LPVW + +FL AL NQ +I+ GSGK+TQIP
Sbjct: 43 INPWTGMPYSQSYYEILEKRKTLPVWQQKDEFLKALKANQCIILVGETGSGKTTQIP 99
>ref|NP_001088262.1| putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
[Xenopus laevis] gi|82233454|sp|Q5XH12.1|DHX32_XENLA
RecName: Full=Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX32
gi|54038016|gb|AAH84264.1| LOC495093 protein [Xenopus
laevis]
Length = 748
Score = 69.7 bits (169), Expect = 4e-10
Identities = 31/58 (53%), Positives = 44/58 (75%)
Frame = -2
Query: 175 EVNPATGWPFSRRYHKLLQRRKNLPVWADRSKFLDALAKNQVVIVAAPPGSGKSTQIP 2
E+NP G P+S R++KLL+ R+ LP+W + FL+ LA NQ+V+V+A P SGKS+QIP
Sbjct: 41 ELNPFDGLPYSSRFYKLLKERETLPIWKIKYDFLEHLAHNQIVVVSAGPKSGKSSQIP 98
>ref|XP_001755545.1| predicted protein [Physcomitrella patens]
gi|168005698|ref|XP_001755547.1| predicted protein
[Physcomitrella patens] gi|162693252|gb|EDQ79605.1|
predicted protein [Physcomitrella patens]
gi|162693254|gb|EDQ79607.1| predicted protein
[Physcomitrella patens]
Length = 715
Score = 69.7 bits (169), Expect = 4e-10
Identities = 29/57 (50%), Positives = 44/57 (77%)
Frame = -2
Query: 172 VNPATGWPFSRRYHKLLQRRKNLPVWADRSKFLDALAKNQVVIVAAPPGSGKSTQIP 2
+NP TG P+S +Y ++L++R+ LPVW +++FL+ LAKNQ +I+ GSGK+TQIP
Sbjct: 33 LNPHTGRPYSAKYFEILEKRRTLPVWQQKAEFLNILAKNQTMILVGETGSGKTTQIP 89
>ref|XP_005794841.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX32-like [Xiphophorus maculatus]
Length = 733
Score = 69.3 bits (168), Expect = 5e-10
Identities = 37/75 (49%), Positives = 47/75 (62%)
Frame = -2
Query: 226 FSSSPIADPAMADEEAKEVNPATGWPFSRRYHKLLQRRKNLPVWADRSKFLDALAKNQVV 47
FS S + + E+N G PFS RY++LL++RK LPVW RSKF DAL NQ+V
Sbjct: 13 FSESGEESASFGFGDDLELNQFDGLPFSSRYYELLEKRKALPVWKVRSKFEDALENNQLV 72
Query: 46 IVAAPPGSGKSTQIP 2
IV+ +G STQIP
Sbjct: 73 IVSGVAQTGSSTQIP 87
>ref|XP_006845501.1| hypothetical protein AMTR_s00019p00154740 [Amborella trichopoda]
gi|548848073|gb|ERN07176.1| hypothetical protein
AMTR_s00019p00154740 [Amborella trichopoda]
Length = 714
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 5/75 (6%)
Frame = -2
Query: 211 IADPAMADEE-----AKEVNPATGWPFSRRYHKLLQRRKNLPVWADRSKFLDALAKNQVV 47
+ DP++A ++ + +VN G P+S+RY ++L++RK LPVW + +FLD L K+Q +
Sbjct: 15 VGDPSVAAKKLSVNGSADVNRWNGRPYSQRYFEILEKRKTLPVWQQKQEFLDTLEKHQTL 74
Query: 46 IVAAPPGSGKSTQIP 2
I+ GSGK+TQIP
Sbjct: 75 ILVGETGSGKTTQIP 89
>ref|XP_003793413.1| PREDICTED: ATP-dependent RNA helicase DQX1 [Otolemur garnettii]
Length = 719
Score = 69.3 bits (168), Expect = 5e-10
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Frame = -2
Query: 190 DEEAKEVNPATGWPFSRRYHKLLQRRKNLPVWADRSKFLDALAKNQ--VVIVAAPPGSGK 17
+E VNP G PFS RY++LL++R+ LP+WA R FL+ L N VV+V+ PGSGK
Sbjct: 17 EESELAVNPFDGLPFSSRYYELLEQRRALPIWAARFIFLEQLESNPTGVVLVSGEPGSGK 76
Query: 16 STQIP 2
STQIP
Sbjct: 77 STQIP 81