BLASTX nr result
ID: Zingiber23_contig00050095
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00050095
(305 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 135 4e-30
ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chai... 135 7e-30
gb|AFS41770.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 131 8e-29
gb|AFS41765.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 131 8e-29
gb|AFS41744.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 131 8e-29
gb|AFS41729.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 131 8e-29
gb|AFS41724.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 131 8e-29
gb|AEX60841.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 131 8e-29
gb|AEX60836.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 131 8e-29
dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 130 2e-28
sp|P29684.1|RBS_HEVBR RecName: Full=Ribulose bisphosphate carbox... 129 3e-28
gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox... 129 3e-28
gb|EOY04196.1| Ribulose bisphosphate carboxylase (small chain) f... 129 4e-28
gb|EOY04195.1| Ribulose bisphosphate carboxylase (small chain) f... 129 4e-28
dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 129 4e-28
gb|ABQ42090.1| ribulose bisphosphate carboxylase small chain (Ru... 129 4e-28
gb|ABS72189.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 129 4e-28
gb|AAF06098.1| ribulose 1,5-bisphosphate carboxylase small chain... 129 5e-28
ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chai... 129 5e-28
gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subun... 128 7e-28
>dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 181
Score = 135 bits (341), Expect = 4e-30
Identities = 64/76 (84%), Positives = 71/76 (93%)
Frame = +1
Query: 76 NRASPAQASMVAPFTGLKSTSAFPVTRKESDITSLASNGGRVQCMQVWPPLGKKKYETLS 255
NRASPAQASMVAPFTGLKS SAFPVTRK +DITSLASNGGRVQCMQVWPP+GKKK+ETLS
Sbjct: 15 NRASPAQASMVAPFTGLKSASAFPVTRKSADITSLASNGGRVQCMQVWPPIGKKKFETLS 74
Query: 256 YLPELSLEQLAREVDY 303
YLP LS E+L +E++Y
Sbjct: 75 YLPPLSREELLKEIEY 90
>ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chain, chloroplast
precursor, putative [Ricinus communis]
gi|223528159|gb|EEF30223.1| Ribulose bisphosphate
carboxylase small chain, chloroplast precursor, putative
[Ricinus communis]
Length = 185
Score = 135 bits (339), Expect = 7e-30
Identities = 66/77 (85%), Positives = 74/77 (96%), Gaps = 1/77 (1%)
Frame = +1
Query: 76 NRASPAQASMVAPFTGLKSTSAFPVTRK-ESDITSLASNGGRVQCMQVWPPLGKKKYETL 252
NRASPAQASMVAPFTGLKSTSAFPVTRK +DIT+LA+NGGRVQCMQVWPPLGKKK+ETL
Sbjct: 15 NRASPAQASMVAPFTGLKSTSAFPVTRKTNTDITTLANNGGRVQCMQVWPPLGKKKFETL 74
Query: 253 SYLPELSLEQLAREVDY 303
SYLP+L+ EQLA+EV+Y
Sbjct: 75 SYLPDLTREQLAKEVEY 91
>gb|AFS41770.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit,
partial (chloroplast) [Gossypium gossypioides]
Length = 168
Score = 131 bits (330), Expect = 8e-29
Identities = 65/77 (84%), Positives = 72/77 (93%), Gaps = 1/77 (1%)
Frame = +1
Query: 76 NRASPAQASMVAPFTGLKSTSAFPVTRK-ESDITSLASNGGRVQCMQVWPPLGKKKYETL 252
NR+SPAQA+MVAPFTGLKS SAFPVTRK +DITSLASNGGRVQCMQVWPPLGKKK+ETL
Sbjct: 7 NRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETL 66
Query: 253 SYLPELSLEQLAREVDY 303
SYLP+L+ QLA+EVDY
Sbjct: 67 SYLPDLTPVQLAKEVDY 83
>gb|AFS41765.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit,
partial (chloroplast) [Gossypium armourianum]
gi|406366540|gb|AFS41767.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial
(chloroplast) [Gossypium davidsonii]
Length = 168
Score = 131 bits (330), Expect = 8e-29
Identities = 65/77 (84%), Positives = 72/77 (93%), Gaps = 1/77 (1%)
Frame = +1
Query: 76 NRASPAQASMVAPFTGLKSTSAFPVTRK-ESDITSLASNGGRVQCMQVWPPLGKKKYETL 252
NR+SPAQA+MVAPFTGLKS SAFPVTRK +DITSLASNGGRVQCMQVWPPLGKKK+ETL
Sbjct: 7 NRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETL 66
Query: 253 SYLPELSLEQLAREVDY 303
SYLP+L+ QLA+EVDY
Sbjct: 67 SYLPDLTPVQLAKEVDY 83
>gb|AFS41744.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium tomentosum]
Length = 182
Score = 131 bits (330), Expect = 8e-29
Identities = 65/77 (84%), Positives = 72/77 (93%), Gaps = 1/77 (1%)
Frame = +1
Query: 76 NRASPAQASMVAPFTGLKSTSAFPVTRK-ESDITSLASNGGRVQCMQVWPPLGKKKYETL 252
NR+SPAQA+MVAPFTGLKS SAFPVTRK +DITSLASNGGRVQCMQVWPPLGKKK+ETL
Sbjct: 15 NRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETL 74
Query: 253 SYLPELSLEQLAREVDY 303
SYLP+L+ QLA+EVDY
Sbjct: 75 SYLPDLTPVQLAKEVDY 91
>gb|AFS41729.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366478|gb|AFS41736.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium barbadense] gi|406366508|gb|AFS41751.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium mustelinum]
Length = 182
Score = 131 bits (330), Expect = 8e-29
Identities = 65/77 (84%), Positives = 72/77 (93%), Gaps = 1/77 (1%)
Frame = +1
Query: 76 NRASPAQASMVAPFTGLKSTSAFPVTRK-ESDITSLASNGGRVQCMQVWPPLGKKKYETL 252
NR+SPAQA+MVAPFTGLKS SAFPVTRK +DITSLASNGGRVQCMQVWPPLGKKK+ETL
Sbjct: 15 NRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETL 74
Query: 253 SYLPELSLEQLAREVDY 303
SYLP+L+ QLA+EVDY
Sbjct: 75 SYLPDLTPVQLAKEVDY 91
>gb|AFS41724.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium raimondii]
Length = 182
Score = 131 bits (330), Expect = 8e-29
Identities = 65/77 (84%), Positives = 72/77 (93%), Gaps = 1/77 (1%)
Frame = +1
Query: 76 NRASPAQASMVAPFTGLKSTSAFPVTRK-ESDITSLASNGGRVQCMQVWPPLGKKKYETL 252
NR+SPAQA+MVAPFTGLKS SAFPVTRK +DITSLASNGGRVQCMQVWPPLGKKK+ETL
Sbjct: 15 NRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETL 74
Query: 253 SYLPELSLEQLAREVDY 303
SYLP+L+ QLA+EVDY
Sbjct: 75 SYLPDLTPVQLAKEVDY 91
>gb|AEX60841.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366462|gb|AFS41728.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium hirsutum] gi|406366476|gb|AFS41735.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium barbadense]
gi|406366492|gb|AFS41743.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium tomentosum] gi|406366506|gb|AFS41750.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium mustelinum]
gi|406366520|gb|AFS41757.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium darwinii]
Length = 182
Score = 131 bits (330), Expect = 8e-29
Identities = 65/77 (84%), Positives = 72/77 (93%), Gaps = 1/77 (1%)
Frame = +1
Query: 76 NRASPAQASMVAPFTGLKSTSAFPVTRK-ESDITSLASNGGRVQCMQVWPPLGKKKYETL 252
NR+SPAQA+MVAPFTGLKS SAFPVTRK +DITSLASNGGRVQCMQVWPPLGKKK+ETL
Sbjct: 15 NRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETL 74
Query: 253 SYLPELSLEQLAREVDY 303
SYLP+L+ QLA+EVDY
Sbjct: 75 SYLPDLTPVQLAKEVDY 91
>gb|AEX60836.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit,
partial (chloroplast) [Gossypium raimondii]
Length = 168
Score = 131 bits (330), Expect = 8e-29
Identities = 65/77 (84%), Positives = 72/77 (93%), Gaps = 1/77 (1%)
Frame = +1
Query: 76 NRASPAQASMVAPFTGLKSTSAFPVTRK-ESDITSLASNGGRVQCMQVWPPLGKKKYETL 252
NR+SPAQA+MVAPFTGLKS SAFPVTRK +DITSLASNGGRVQCMQVWPPLGKKK+ETL
Sbjct: 15 NRSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETL 74
Query: 253 SYLPELSLEQLAREVDY 303
SYLP+L+ QLA+EVDY
Sbjct: 75 SYLPDLTPVQLAKEVDY 91
>dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Panax ginseng]
Length = 183
Score = 130 bits (326), Expect = 2e-28
Identities = 62/76 (81%), Positives = 71/76 (93%)
Frame = +1
Query: 76 NRASPAQASMVAPFTGLKSTSAFPVTRKESDITSLASNGGRVQCMQVWPPLGKKKYETLS 255
+RA PAQASMVAPFTGLKST+AFPVTRK +DITSL SNGGRVQCM+VWPPLG KK+ETLS
Sbjct: 15 SRAVPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMKVWPPLGLKKFETLS 74
Query: 256 YLPELSLEQLAREVDY 303
YLP+L+ EQL++EVDY
Sbjct: 75 YLPQLTQEQLSKEVDY 90
>sp|P29684.1|RBS_HEVBR RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|168217|gb|AAA33361.1|
ribulose-1,5-bisphosphate carboxylase small subunit
[Hevea brasiliensis]
Length = 183
Score = 129 bits (325), Expect = 3e-28
Identities = 65/77 (84%), Positives = 70/77 (90%), Gaps = 1/77 (1%)
Frame = +1
Query: 76 NRASPAQASMVAPFTGLKSTSAFPVTRKES-DITSLASNGGRVQCMQVWPPLGKKKYETL 252
NRASPAQASMVAPFTGLKSTSAFP TRK + DITS+ASNGGRVQCMQVWPP GKK YETL
Sbjct: 15 NRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCMQVWPPRGKKFYETL 74
Query: 253 SYLPELSLEQLAREVDY 303
SYLP L+ EQLA+EV+Y
Sbjct: 75 SYLPPLTREQLAKEVEY 91
>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Aralia elata]
Length = 183
Score = 129 bits (325), Expect = 3e-28
Identities = 62/76 (81%), Positives = 71/76 (93%)
Frame = +1
Query: 76 NRASPAQASMVAPFTGLKSTSAFPVTRKESDITSLASNGGRVQCMQVWPPLGKKKYETLS 255
+RA+PAQASMVAPFTGLKST+AFPVTRK +DITSL SNGGRVQCM+VWPPLG KK+ETLS
Sbjct: 15 SRAAPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMKVWPPLGLKKFETLS 74
Query: 256 YLPELSLEQLAREVDY 303
YLP L+ E+LA+EVDY
Sbjct: 75 YLPPLTNEELAKEVDY 90
>gb|EOY04196.1| Ribulose bisphosphate carboxylase (small chain) family protein
isoform 2 [Theobroma cacao]
Length = 184
Score = 129 bits (324), Expect = 4e-28
Identities = 64/77 (83%), Positives = 71/77 (92%), Gaps = 1/77 (1%)
Frame = +1
Query: 76 NRASPAQASMVAPFTGLKSTSAFPVTRK-ESDITSLASNGGRVQCMQVWPPLGKKKYETL 252
NRASPAQASMVAPFTGLKSTSA PV RK +DITSLASNGGRVQCMQVWPPLGKKK+ETL
Sbjct: 15 NRASPAQASMVAPFTGLKSTSALPVARKANNDITSLASNGGRVQCMQVWPPLGKKKFETL 74
Query: 253 SYLPELSLEQLAREVDY 303
SYLP+L+ E+L +EV+Y
Sbjct: 75 SYLPDLTRERLFKEVEY 91
>gb|EOY04195.1| Ribulose bisphosphate carboxylase (small chain) family protein
isoform 1 [Theobroma cacao]
Length = 189
Score = 129 bits (324), Expect = 4e-28
Identities = 64/77 (83%), Positives = 71/77 (92%), Gaps = 1/77 (1%)
Frame = +1
Query: 76 NRASPAQASMVAPFTGLKSTSAFPVTRK-ESDITSLASNGGRVQCMQVWPPLGKKKYETL 252
NRASPAQASMVAPFTGLKSTSA PV RK +DITSLASNGGRVQCMQVWPPLGKKK+ETL
Sbjct: 15 NRASPAQASMVAPFTGLKSTSALPVARKANNDITSLASNGGRVQCMQVWPPLGKKKFETL 74
Query: 253 SYLPELSLEQLAREVDY 303
SYLP+L+ E+L +EV+Y
Sbjct: 75 SYLPDLTRERLFKEVEY 91
>dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 179
Score = 129 bits (324), Expect = 4e-28
Identities = 64/76 (84%), Positives = 70/76 (92%), Gaps = 1/76 (1%)
Frame = +1
Query: 79 RASPAQASMVAPFTGLKSTSAFPVTRKES-DITSLASNGGRVQCMQVWPPLGKKKYETLS 255
RA+PAQA+MVAPFTGLKS SAFPVTRK S DITSL+SNGGRVQCMQVWPP+GKKK+ETLS
Sbjct: 13 RATPAQATMVAPFTGLKSASAFPVTRKSSEDITSLSSNGGRVQCMQVWPPIGKKKFETLS 72
Query: 256 YLPELSLEQLAREVDY 303
YLP LS E LA+EVDY
Sbjct: 73 YLPPLSPESLAKEVDY 88
>gb|ABQ42090.1| ribulose bisphosphate carboxylase small chain (RuBisCO small
subunit) [Sonneratia apetala]
Length = 178
Score = 129 bits (324), Expect = 4e-28
Identities = 61/76 (80%), Positives = 69/76 (90%)
Frame = +1
Query: 76 NRASPAQASMVAPFTGLKSTSAFPVTRKESDITSLASNGGRVQCMQVWPPLGKKKYETLS 255
NR +PAQASMVAPFTGLKS+SAFP TRK +DITSLASNGGRVQCMQVWPP G KK+ETLS
Sbjct: 9 NRTAPAQASMVAPFTGLKSSSAFPTTRKTADITSLASNGGRVQCMQVWPPEGLKKFETLS 68
Query: 256 YLPELSLEQLAREVDY 303
YLP+LS EQL +E++Y
Sbjct: 69 YLPDLSREQLIKEIEY 84
>gb|ABS72189.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit 1A
[Corchorus olitorius]
Length = 183
Score = 129 bits (324), Expect = 4e-28
Identities = 63/77 (81%), Positives = 71/77 (92%), Gaps = 1/77 (1%)
Frame = +1
Query: 76 NRASPAQASMVAPFTGLKSTSAFPVTRKES-DITSLASNGGRVQCMQVWPPLGKKKYETL 252
NRASPAQA++VAPFTGLKS SAFP TRK + DITS+ASNGGRVQCMQVWPPLGKKK+ETL
Sbjct: 13 NRASPAQATLVAPFTGLKSASAFPTTRKNNRDITSIASNGGRVQCMQVWPPLGKKKFETL 72
Query: 253 SYLPELSLEQLAREVDY 303
SYLP+L+ QLA+EVDY
Sbjct: 73 SYLPDLTPVQLAKEVDY 89
>gb|AAF06098.1| ribulose 1,5-bisphosphate carboxylase small chain precursor
[Manihot esculenta] gi|6272551|gb|AAF06101.1| ribulose
1,5-bisphosphate carboxylase small chain precursor
[Manihot esculenta]
Length = 184
Score = 129 bits (323), Expect = 5e-28
Identities = 66/77 (85%), Positives = 68/77 (88%), Gaps = 1/77 (1%)
Frame = +1
Query: 76 NRASPAQASMVAPFTGLKSTSAFPVTRKES-DITSLASNGGRVQCMQVWPPLGKKKYETL 252
NRASPAQASMVAPFTGLKSTSAFP T K S DITSLASNGGRVQCMQVWP GKKK+ETL
Sbjct: 15 NRASPAQASMVAPFTGLKSTSAFPATTKTSADITSLASNGGRVQCMQVWPTRGKKKFETL 74
Query: 253 SYLPELSLEQLAREVDY 303
SYLP LS EQLA E+DY
Sbjct: 75 SYLPPLSREQLASEIDY 91
>ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chain 1B, chloroplast
precursor, putative [Ricinus communis]
gi|223539597|gb|EEF41184.1| Ribulose bisphosphate
carboxylase small chain 1B, chloroplast precursor,
putative [Ricinus communis]
Length = 181
Score = 129 bits (323), Expect = 5e-28
Identities = 62/77 (80%), Positives = 73/77 (94%), Gaps = 1/77 (1%)
Frame = +1
Query: 76 NRASPAQASMVAPFTGLKSTSAFPVTRK-ESDITSLASNGGRVQCMQVWPPLGKKKYETL 252
+R+SPAQA+MVAPFTGLKS ++FPVTRK +DITS+ASNGGRVQCMQVWPPLGKKK+ETL
Sbjct: 12 SRSSPAQATMVAPFTGLKSAASFPVTRKANNDITSIASNGGRVQCMQVWPPLGKKKFETL 71
Query: 253 SYLPELSLEQLAREVDY 303
SYLP+L+ EQLA+EVDY
Sbjct: 72 SYLPDLTDEQLAKEVDY 88
>gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subunit [Malus
domestica x Pyrus communis]
Length = 179
Score = 128 bits (322), Expect = 7e-28
Identities = 61/74 (82%), Positives = 68/74 (91%)
Frame = +1
Query: 82 ASPAQASMVAPFTGLKSTSAFPVTRKESDITSLASNGGRVQCMQVWPPLGKKKYETLSYL 261
++PAQA MVAPFTGLKS+SAFPVTRK +DITS+ASNGGRVQCMQVWPPLG KK+ETLSYL
Sbjct: 15 SAPAQARMVAPFTGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYL 74
Query: 262 PELSLEQLAREVDY 303
P LS E LA+EVDY
Sbjct: 75 PPLSTESLAKEVDY 88