BLASTX nr result

ID: Zingiber23_contig00050091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00050091
         (296 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333907.1| predicted protein [Populus trichocarpa]            46   2e-06
ref|XP_002339778.1| predicted protein [Populus trichocarpa]            46   2e-06

>ref|XP_002333907.1| predicted protein [Populus trichocarpa]
          Length = 392

 Score = 45.8 bits (107), Expect(2) = 2e-06
 Identities = 20/36 (55%), Positives = 30/36 (83%)
 Frame = +3

Query: 15  LVRLYLSWFSVCRIILLAKRTSKATFESIIAPSRLS 122
           LV++YLS+FSVCR I LAKR  ++  ESI++PS+++
Sbjct: 81  LVKIYLSYFSVCRSIRLAKRLDRSILESIVSPSQVT 116



 Score = 31.6 bits (70), Expect(2) = 2e-06
 Identities = 11/25 (44%), Positives = 19/25 (76%)
 Frame = +2

Query: 182 YLPWISNIPLFKGISWKPTWKSTPN 256
           Y P I ++PL +G+++ PTWK+ P+
Sbjct: 137 YCPKIESMPLCQGVTFCPTWKAIPS 161


>ref|XP_002339778.1| predicted protein [Populus trichocarpa]
          Length = 307

 Score = 45.8 bits (107), Expect(2) = 2e-06
 Identities = 20/36 (55%), Positives = 30/36 (83%)
 Frame = +3

Query: 15  LVRLYLSWFSVCRIILLAKRTSKATFESIIAPSRLS 122
           LV++YLS+FSVCR I LAKR  ++  ESI++PS+++
Sbjct: 77  LVKIYLSYFSVCRSIRLAKRLDRSILESIVSPSQVT 112



 Score = 31.6 bits (70), Expect(2) = 2e-06
 Identities = 11/25 (44%), Positives = 19/25 (76%)
 Frame = +2

Query: 182 YLPWISNIPLFKGISWKPTWKSTPN 256
           Y P I ++PL +G+++ PTWK+ P+
Sbjct: 133 YCPKIESMPLCQGVTFCPTWKAIPS 157


Top