BLASTX nr result
ID: Zingiber23_contig00050069
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00050069
(300 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI22850.3| unnamed protein product [Vitis vinifera] 92 7e-17
ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containi... 92 7e-17
gb|EOY06793.1| Pentatricopeptide repeat (PPR) superfamily protei... 77 2e-12
ref|XP_006842061.1| hypothetical protein AMTR_s00078p00041370 [A... 77 3e-12
ref|XP_006338000.1| PREDICTED: pentatricopeptide repeat-containi... 73 3e-11
ref|XP_002314968.2| pentatricopeptide repeat-containing family p... 73 3e-11
ref|XP_002519267.1| pentatricopeptide repeat-containing protein,... 72 1e-10
ref|XP_006404215.1| hypothetical protein EUTSA_v10010184mg [Eutr... 69 9e-10
ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containi... 69 9e-10
ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containi... 69 9e-10
ref|NP_190450.1| pentatricopeptide repeat-containing protein [Ar... 69 9e-10
ref|XP_006488802.1| PREDICTED: pentatricopeptide repeat-containi... 68 1e-09
ref|XP_006419330.1| hypothetical protein CICLE_v10004501mg [Citr... 68 1e-09
ref|XP_004229098.1| PREDICTED: pentatricopeptide repeat-containi... 68 1e-09
ref|XP_006290741.1| hypothetical protein CARUB_v10016837mg [Caps... 67 3e-09
gb|EXB94360.1| hypothetical protein L484_005954 [Morus notabilis] 66 4e-09
gb|EPS58000.1| hypothetical protein M569_16815, partial [Genlise... 66 6e-09
ref|XP_002875927.1| pentatricopeptide repeat-containing protein ... 66 6e-09
ref|XP_004295051.1| PREDICTED: pentatricopeptide repeat-containi... 65 7e-09
ref|XP_004498194.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-08
>emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 92.0 bits (227), Expect = 7e-17
Identities = 46/85 (54%), Positives = 61/85 (71%)
Frame = +3
Query: 45 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEKGSDVSKLKEADVLRHLKSERNIAVAL 224
M+L EG SLLLKV K ++ VL+ N +P+ + E S LKEADVL+ LK E +I +AL
Sbjct: 1 MHLKEGCSLLLKVRKPSIPFVLSTNPVPNLKAENEEKSSVLKEADVLKRLKHEHDITLAL 60
Query: 225 DFFRHVAGFKGFRHTPLTYQMMIEK 299
++F+ +A K F+HTPLTYQMMIEK
Sbjct: 61 EYFKSIANSKSFKHTPLTYQMMIEK 85
>ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 92.0 bits (227), Expect = 7e-17
Identities = 46/85 (54%), Positives = 61/85 (71%)
Frame = +3
Query: 45 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEKGSDVSKLKEADVLRHLKSERNIAVAL 224
M+L EG SLLLKV K ++ VL+ N +P+ + E S LKEADVL+ LK E +I +AL
Sbjct: 1 MHLKEGCSLLLKVRKPSIPFVLSTNPVPNLKAENEEKSSVLKEADVLKRLKHEHDITLAL 60
Query: 225 DFFRHVAGFKGFRHTPLTYQMMIEK 299
++F+ +A K F+HTPLTYQMMIEK
Sbjct: 61 EYFKSIANSKSFKHTPLTYQMMIEK 85
>gb|EOY06793.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 664
Score = 77.4 bits (189), Expect = 2e-12
Identities = 39/87 (44%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Frame = +3
Query: 45 MYLSEGRSLLLKVPKSAVTSVLTLNMI--PDTEKEKGSDVSKLKEADVLRHLKSERNIAV 218
MYL EGRSLLLKV K ++ +L N + P E + + ++L+E+ VL LK E N+++
Sbjct: 1 MYLKEGRSLLLKVQKPSIPFILNTNPLLKPHKESQTEPNQTQLEESQVLSRLKQEPNMSL 60
Query: 219 ALDFFRHVAGFKGFRHTPLTYQMMIEK 299
AL++F+ +A F+HTP TYQ MI+K
Sbjct: 61 ALNYFKSIANSNSFKHTPETYQCMIQK 87
>ref|XP_006842061.1| hypothetical protein AMTR_s00078p00041370 [Amborella trichopoda]
gi|548844110|gb|ERN03736.1| hypothetical protein
AMTR_s00078p00041370 [Amborella trichopoda]
Length = 661
Score = 76.6 bits (187), Expect = 3e-12
Identities = 39/85 (45%), Positives = 55/85 (64%)
Frame = +3
Query: 45 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEKGSDVSKLKEADVLRHLKSERNIAVAL 224
M L EG +LLLKV + +V+ +L +N KE V+ KE +V R LK E ++ VAL
Sbjct: 1 MVLKEGSTLLLKVRRPSVSVLLNMNGRSGDNKESKGSVAVPKEFEVFRRLKHEEDVNVAL 60
Query: 225 DFFRHVAGFKGFRHTPLTYQMMIEK 299
++F+ + KGF+HT LTYQ+MIEK
Sbjct: 61 EYFKFITNSKGFKHTSLTYQLMIEK 85
>ref|XP_006338000.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Solanum tuberosum]
Length = 663
Score = 73.2 bits (178), Expect = 3e-11
Identities = 41/88 (46%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Frame = +3
Query: 45 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEK---GSDVSKLKEADVLRHLKSERNIA 215
MYL EG SLLLKV K ++ +L N+ P ++ G + +LKE+DVL+ LK E NI+
Sbjct: 1 MYLKEGCSLLLKVHKKSLPLILN-NVNPSFNVDQLNGGKNPVELKESDVLKRLKYEENIS 59
Query: 216 VALDFFRHVAGFKGFRHTPLTYQMMIEK 299
A+++F+ VA F+HTPLTY++M+EK
Sbjct: 60 NAIEYFKWVANSTFFKHTPLTYKIMMEK 87
>ref|XP_002314968.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550329900|gb|EEF01139.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 662
Score = 73.2 bits (178), Expect = 3e-11
Identities = 42/86 (48%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = +3
Query: 45 MYLSEGRSLLLKVPKSAVTSVL-TLNMIPDTEKEKGSDVSKLKEADVLRHLKSERNIAVA 221
MYL EG SLLLK K V VL T+N + + +K D++ LKE++VL LK+E NI +A
Sbjct: 1 MYLKEGCSLLLKKQKPLVPFVLNTINPLQNEQK----DLNLLKESEVLNKLKNEPNILLA 56
Query: 222 LDFFRHVAGFKGFRHTPLTYQMMIEK 299
L FF+ +A F+HTPLTY MI++
Sbjct: 57 LHFFKSIANSNSFKHTPLTYTTMIKR 82
>ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223541582|gb|EEF43131.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 665
Score = 71.6 bits (174), Expect = 1e-10
Identities = 40/88 (45%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Frame = +3
Query: 45 MYLSEGRSLLLKVPKSAVTSVLTLNMI--PDTEKEKGSDV-SKLKEADVLRHLKSERNIA 215
MYL EG SLLLKV K + VL N I P + + ++ + +KE+DV+ L++E +I
Sbjct: 1 MYLKEGCSLLLKVHKPLIPFVLNTNPILNPGNKPPEYQEIKTPIKESDVVMRLRTETDIV 60
Query: 216 VALDFFRHVAGFKGFRHTPLTYQMMIEK 299
+A ++FR +A K F+HT LTYQ+MIEK
Sbjct: 61 LASNYFRSIANSKAFQHTQLTYQIMIEK 88
>ref|XP_006404215.1| hypothetical protein EUTSA_v10010184mg [Eutrema salsugineum]
gi|557105334|gb|ESQ45668.1| hypothetical protein
EUTSA_v10010184mg [Eutrema salsugineum]
Length = 650
Score = 68.6 bits (166), Expect = 9e-10
Identities = 34/85 (40%), Positives = 53/85 (62%)
Frame = +3
Query: 45 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEKGSDVSKLKEADVLRHLKSERNIAVAL 224
MYL EG SLLLKV K + VL N+ E + +++KE +V++ L+ E + +AL
Sbjct: 1 MYLKEGCSLLLKVQKPIIPFVLNTNLTGKLLLESPNPATEIKEFEVVKRLRQESCVPLAL 60
Query: 225 DFFRHVAGFKGFRHTPLTYQMMIEK 299
+F+ +A F+HTPLT+++MI K
Sbjct: 61 QYFKSIANSNLFKHTPLTFEVMIRK 85
>ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 68.6 bits (166), Expect = 9e-10
Identities = 36/85 (42%), Positives = 53/85 (62%)
Frame = +3
Query: 45 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEKGSDVSKLKEADVLRHLKSERNIAVAL 224
MYL EGRSLL+K+ K + VL N I + + L+E+DVL+ LK++RN++ L
Sbjct: 1 MYLKEGRSLLMKIQKPLIPFVLNSNPIINPRDPNKQQL--LQESDVLKRLKTDRNLSSVL 58
Query: 225 DFFRHVAGFKGFRHTPLTYQMMIEK 299
FF +A F+HT TY++MIE+
Sbjct: 59 GFFSAIANSNAFQHTASTYRVMIER 83
>ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 68.6 bits (166), Expect = 9e-10
Identities = 36/85 (42%), Positives = 53/85 (62%)
Frame = +3
Query: 45 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEKGSDVSKLKEADVLRHLKSERNIAVAL 224
MYL EGRSLL+K+ K + VL N I + + L+E+DVL+ LK++RN++ L
Sbjct: 1 MYLKEGRSLLMKIQKPLIPFVLNSNPIINPRDPNKQQL--LQESDVLKRLKTDRNLSSVL 58
Query: 225 DFFRHVAGFKGFRHTPLTYQMMIEK 299
FF +A F+HT TY++MIE+
Sbjct: 59 GFFSAIANSNAFQHTASTYRVMIER 83
>ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g48810 gi|7576219|emb|CAB87909.1| putative protein
[Arabidopsis thaliana] gi|332644937|gb|AEE78458.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 659
Score = 68.6 bits (166), Expect = 9e-10
Identities = 35/85 (41%), Positives = 54/85 (63%)
Frame = +3
Query: 45 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEKGSDVSKLKEADVLRHLKSERNIAVAL 224
MYL EG SLLLKV K + VL N+ + + + +++KE DV++ L+ E + +AL
Sbjct: 1 MYLKEGCSLLLKVQKPLIPFVLNTNLNVNHLLTESPNHAEIKELDVVKRLRQESCVPLAL 60
Query: 225 DFFRHVAGFKGFRHTPLTYQMMIEK 299
FF+ +A F+HTPLT+++MI K
Sbjct: 61 HFFKSIANSNLFKHTPLTFEVMIRK 85
>ref|XP_006488802.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Citrus sinensis]
Length = 661
Score = 68.2 bits (165), Expect = 1e-09
Identities = 36/85 (42%), Positives = 54/85 (63%)
Frame = +3
Query: 45 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEKGSDVSKLKEADVLRHLKSERNIAVAL 224
MYL +G SL+LK K ++ VL N IP++ ++ + + E V + L+ E NIA AL
Sbjct: 1 MYLKKGCSLILKTQKPSIPFVLNTNPIPNSTNDENK-YTHVDEFRVSKRLRQEPNIASAL 59
Query: 225 DFFRHVAGFKGFRHTPLTYQMMIEK 299
++F+ +A F+HT LTYQ+MIEK
Sbjct: 60 NYFKSIANSNTFKHTALTYQVMIEK 84
>ref|XP_006419330.1| hypothetical protein CICLE_v10004501mg [Citrus clementina]
gi|557521203|gb|ESR32570.1| hypothetical protein
CICLE_v10004501mg [Citrus clementina]
Length = 661
Score = 68.2 bits (165), Expect = 1e-09
Identities = 36/85 (42%), Positives = 54/85 (63%)
Frame = +3
Query: 45 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEKGSDVSKLKEADVLRHLKSERNIAVAL 224
MYL +G SL+LK K ++ VL N IP++ ++ + + E V + L+ E NIA AL
Sbjct: 1 MYLKKGCSLILKTQKPSIPFVLNTNPIPNSTNDENK-YTHVDEFRVSKRLRQEPNIASAL 59
Query: 225 DFFRHVAGFKGFRHTPLTYQMMIEK 299
++F+ +A F+HT LTYQ+MIEK
Sbjct: 60 NYFKSIANSNTFKHTALTYQVMIEK 84
>ref|XP_004229098.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Solanum lycopersicum]
Length = 663
Score = 68.2 bits (165), Expect = 1e-09
Identities = 39/87 (44%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Frame = +3
Query: 45 MYLSEGRSLLLKVPKSAVTSVLT-LNMIPDTEKEKGSDVS-KLKEADVLRHLKSERNIAV 218
MYL +G SLLLKV K ++ +L +N + ++ G +LKE DVL+ LK + NI+
Sbjct: 1 MYLKDGCSLLLKVQKRSLPLILNNVNASFNVDQFNGGKTPVELKEFDVLKRLKYDENISN 60
Query: 219 ALDFFRHVAGFKGFRHTPLTYQMMIEK 299
AL++F+ VA F+HTPLTY++M+EK
Sbjct: 61 ALEYFKWVANSTFFKHTPLTYKIMMEK 87
>ref|XP_006290741.1| hypothetical protein CARUB_v10016837mg [Capsella rubella]
gi|482559448|gb|EOA23639.1| hypothetical protein
CARUB_v10016837mg [Capsella rubella]
Length = 634
Score = 66.6 bits (161), Expect = 3e-09
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = +3
Query: 45 MYLSEGRSLLLKVPKSAVTSVLTLNMIPD--TEKEKGSDVSKLKEADVLRHLKSERNIAV 218
MYL EG SLLLKV K + VL N+ + TE K ++ KE+DV++ L+ E + +
Sbjct: 1 MYLKEGCSLLLKVQKPLIPFVLNTNLSVNLLTEAPKHDEI---KESDVVKRLRQESCVPL 57
Query: 219 ALDFFRHVAGFKGFRHTPLTYQMMIEK 299
AL FF+ VA F+HTP T+++MI K
Sbjct: 58 ALHFFKSVANSNLFKHTPFTFEVMIRK 84
>gb|EXB94360.1| hypothetical protein L484_005954 [Morus notabilis]
Length = 653
Score = 66.2 bits (160), Expect = 4e-09
Identities = 35/85 (41%), Positives = 47/85 (55%)
Frame = +3
Query: 45 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEKGSDVSKLKEADVLRHLKSERNIAVAL 224
MYL EGRSL LK+ KS + L KE+DVL+ L E ++A+A+
Sbjct: 1 MYLKEGRSLALKLRKSPMAKPFFLLNTTKPIPNPNDSEPVFKESDVLKRLNQEPDLALAM 60
Query: 225 DFFRHVAGFKGFRHTPLTYQMMIEK 299
DFF+ ++ F HTPLTY MI+K
Sbjct: 61 DFFKSISNSGAFSHTPLTYHAMIDK 85
>gb|EPS58000.1| hypothetical protein M569_16815, partial [Genlisea aurea]
Length = 588
Score = 65.9 bits (159), Expect = 6e-09
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 5/90 (5%)
Frame = +3
Query: 45 MYLSEGRSLLLKVPKSAVTSVLTLN---MIPDTEKEKGSD--VSKLKEADVLRHLKSERN 209
MYL EGRSL+LK K + S+L + +I D K+ + + L+E+ VL L++E +
Sbjct: 1 MYLREGRSLILKSLKPSTPSLLRTDHPSLIFDQHKDDDPEKIATSLEESQVLNRLRAETD 60
Query: 210 IAVALDFFRHVAGFKGFRHTPLTYQMMIEK 299
++ AL +F+ VA F+HTPLTY MIEK
Sbjct: 61 VSTALHYFKSVAHSASFKHTPLTYGAMIEK 90
>ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297321765|gb|EFH52186.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 657
Score = 65.9 bits (159), Expect = 6e-09
Identities = 36/85 (42%), Positives = 54/85 (63%)
Frame = +3
Query: 45 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEKGSDVSKLKEADVLRHLKSERNIAVAL 224
MYL EG SLLLKV K + VL N+ + E + +++KE+ VL+ L+ E + +AL
Sbjct: 1 MYLKEGCSLLLKVQKPLIPFVLNTNLNVNLLTESPNH-AEIKESAVLKRLRQESCVPLAL 59
Query: 225 DFFRHVAGFKGFRHTPLTYQMMIEK 299
FF+ +A F+HTPLT+++MI K
Sbjct: 60 HFFKSIANSNLFKHTPLTFEVMIRK 84
>ref|XP_004295051.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Fragaria vesca subsp. vesca]
Length = 666
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Frame = +3
Query: 45 MYLSEGRSLLLKVPKSAVTSVLTLN--MIPDTEKEKGSDVSK--LKEADVLRHLKSERNI 212
MYL EG SLLLK+ K VL+ N ++P + ++ ++ LKE++V + LK E +
Sbjct: 1 MYLKEGCSLLLKIHKPTRPLVLSSNPNLVPSLNPKPQTEPTQPILKESEVFQRLKHEPQL 60
Query: 213 AVALDFFRHVAGFKGFRHTPLTYQMMIEK 299
+AL++FR ++ + F+HT LTY MIEK
Sbjct: 61 GLALEYFRSISNSRAFKHTQLTYTAMIEK 89
>ref|XP_004498194.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cicer arietinum]
Length = 662
Score = 63.5 bits (153), Expect = 3e-08
Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +3
Query: 45 MYLSEGRSLLLKVPKSAVTSVLTLNMIPDTEKEKGSDVSK-LKEADVLRHLKSERNIAVA 221
MYL +G SL+LK+ KS++ VL N I + +K + S + E+ V+ LK E +IA +
Sbjct: 1 MYLKDGCSLILKLRKSSIPFVLNTNPISNLDKPNNLNPSPTIPESHVINVLKHESDIASS 60
Query: 222 LDFFRHVAGFKGFRHTPLTYQMMIEK 299
L++F ++ F+HT LTYQ MIEK
Sbjct: 61 LEYFTSLSNSGTFKHTHLTYQTMIEK 86