BLASTX nr result

ID: Zingiber23_contig00050033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00050033
         (425 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266171.2| PREDICTED: probable disease resistance prote...    59   7e-07
emb|CAN74430.1| hypothetical protein VITISV_010987 [Vitis vinifera]    59   7e-07
gb|EMT17768.1| Disease resistance protein RPS2 [Aegilops tauschii]     57   3e-06

>ref|XP_002266171.2| PREDICTED: probable disease resistance protein At5g63020-like
           [Vitis vinifera]
          Length = 781

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/82 (37%), Positives = 49/82 (59%)
 Frame = -2

Query: 424 NYVVSYEDNLSSLAGEVSQLKSKSEDVKREVEATMRQGLTTRNEVLGWLRAVEGVAGEAD 245
           +YV+  ++NL SL  E+ +LK+  EDVKR VE   ++ +  RNEV GWL ++  +  E +
Sbjct: 23  SYVIDLQENLCSLRNEMEELKNVGEDVKRRVEDAEKRQMKRRNEVNGWLNSLTALEREVN 82

Query: 244 QIRAKYERMIKCFCRFPANICT 179
           +I  K ++ I+  C    N CT
Sbjct: 83  EILEKGDQEIQKKCL--RNCCT 102


>emb|CAN74430.1| hypothetical protein VITISV_010987 [Vitis vinifera]
          Length = 2471

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/82 (37%), Positives = 49/82 (59%)
 Frame = -2

Query: 424  NYVVSYEDNLSSLAGEVSQLKSKSEDVKREVEATMRQGLTTRNEVLGWLRAVEGVAGEAD 245
            +YV+  ++NL SL  E+ +LK+  EDVKR VE   ++ +  RNEV GWL ++  +  E +
Sbjct: 1649 SYVIDLQENLCSLRNEMEELKNVGEDVKRRVEDAEKRQMKRRNEVNGWLNSLTALEREVN 1708

Query: 244  QIRAKYERMIKCFCRFPANICT 179
            +I  K ++ I+  C    N CT
Sbjct: 1709 EILEKGDQEIQKKCL--RNCCT 1728


>gb|EMT17768.1| Disease resistance protein RPS2 [Aegilops tauschii]
          Length = 813

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 1/140 (0%)
 Frame = -2

Query: 421 YVVSYEDNLSSLAGEVSQLKSKSEDVKREVEATMRQGLTTRNEVLGWLRAVEGVAGEADQ 242
           YV+S  D + +L  EV +LKSK +DVKR V+A  RQG+   ++V  WL  V  +   A +
Sbjct: 25  YVMSCADYIDALGHEVDELKSKRDDVKRMVDAAERQGMEATSQVKWWLECVARLEDAAAR 84

Query: 241 IRAKYERMIKCFCRFPANICTSVKXXXXXXXXXXXXXXLKQR-DLPEVVHRHNLVRFIRM 65
           I A+Y+  ++        +  + +              LK + D  +V      VRF  M
Sbjct: 85  IHAEYQARLQLPPDQAPGLRATYRLSQRADETLAEAAGLKDKGDFHKVADELVQVRFEEM 144

Query: 64  QNQQTAGVEKAFEELRRHAR 5
            +    G+++  +EL    R
Sbjct: 145 PSAPVVGMDEMLQELHACVR 164


Top