BLASTX nr result
ID: Zingiber23_contig00050023
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00050023
(331 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFK42681.1| unknown [Lotus japonicus] 84 2e-14
ref|XP_002520510.1| transcription initiation factor, putative [R... 73 3e-11
ref|XP_002510115.1| transcription initiation factor, putative [R... 72 8e-11
ref|XP_006363933.1| PREDICTED: transcription initiation factor T... 72 1e-10
ref|XP_006578047.1| PREDICTED: transcription initiation factor T... 71 1e-10
ref|XP_006472283.1| PREDICTED: transcription initiation factor T... 71 1e-10
ref|XP_003527732.1| PREDICTED: transcription initiation factor T... 71 2e-10
ref|XP_006362063.1| PREDICTED: transcription initiation factor T... 70 3e-10
ref|XP_006433616.1| hypothetical protein CICLE_v10000177mg [Citr... 70 4e-10
emb|CBI19420.3| unnamed protein product [Vitis vinifera] 69 8e-10
emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera] 69 8e-10
gb|EOY15762.1| TBP-associated factor 4, putative isoform 2 [Theo... 68 1e-09
gb|EOY15761.1| TBP-associated factor 4, putative isoform 1 [Theo... 68 1e-09
ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252... 67 3e-09
ref|XP_006415735.1| hypothetical protein EUTSA_v10009915mg [Eutr... 66 5e-09
ref|XP_004300119.1| PREDICTED: uncharacterized protein LOC101295... 66 5e-09
ref|XP_006581260.1| PREDICTED: transcription initiation factor T... 65 1e-08
ref|XP_006838543.1| hypothetical protein AMTR_s00002p00199670 [A... 65 1e-08
ref|XP_004238100.1| PREDICTED: uncharacterized protein LOC101262... 65 1e-08
gb|ADD09583.1| transcription initiation factor [Trifolium repens] 65 1e-08
>gb|AFK42681.1| unknown [Lotus japonicus]
Length = 251
Score = 84.0 bits (206), Expect = 2e-14
Identities = 40/59 (67%), Positives = 48/59 (81%)
Frame = -1
Query: 331 SSMPTSGGVRRFGRNGTLAHPKIARNISVKDVIAALEKEPQMSKSSLIYRLYEKSSGDS 155
+S TSG R+FGR+ LAHP+IAR+ISVKD IA LE+EPQMSKSSL+YRLYEK D+
Sbjct: 190 TSTQTSGAARKFGRHNALAHPRIARSISVKDAIAVLEREPQMSKSSLLYRLYEKIHSDA 248
>ref|XP_002520510.1| transcription initiation factor, putative [Ricinus communis]
gi|223540352|gb|EEF41923.1| transcription initiation
factor, putative [Ricinus communis]
Length = 927
Score = 73.2 bits (178), Expect = 3e-11
Identities = 39/60 (65%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Frame = -1
Query: 331 SSMPTSGGVRRFGRNGTLA-HPKIARNISVKDVIAALEKEPQMSKSSLIYRLYEKSSGDS 155
S+ TS G RRFGRN ++A + AR+ISVKDVIAALE+EPQMSKS+LIYRLYE+ D+
Sbjct: 820 SAAVTSTGARRFGRNQSVAPQTRPARSISVKDVIAALEREPQMSKSTLIYRLYERMQSDA 879
>ref|XP_002510115.1| transcription initiation factor, putative [Ricinus communis]
gi|223550816|gb|EEF52302.1| transcription initiation
factor, putative [Ricinus communis]
Length = 925
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/61 (62%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Frame = -1
Query: 331 SSMPTSGGVRRFGRNGTLA-HPKIARNISVKDVIAALEKEPQMSKSSLIYRLYEKSSGDS 155
S S GVR+ GRN K+AR+ISVKDVIAALE+EPQMSKS+LIYRLYE+ D+
Sbjct: 863 SPAAASTGVRKVGRNQAFTPQSKVARSISVKDVIAALEREPQMSKSTLIYRLYERVQSDA 922
Query: 154 P 152
P
Sbjct: 923 P 923
>ref|XP_006363933.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
[Solanum tuberosum]
Length = 405
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/63 (58%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = -1
Query: 331 SSMPTSGGVRRFGRN-GTLAHPKIARNISVKDVIAALEKEPQMSKSSLIYRLYEKSSGDS 155
S++ T G VRR GR G + +IAR+I+VKDVIA LE+EPQMSKS+LIYRLYEK+ ++
Sbjct: 340 SAISTPGAVRRAGRTQGIITQTRIARSITVKDVIAVLEREPQMSKSTLIYRLYEKARSNA 399
Query: 154 PAA 146
+A
Sbjct: 400 SSA 402
>ref|XP_006578047.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X1 [Glycine max] gi|571449126|ref|XP_006578048.1|
PREDICTED: transcription initiation factor TFIID subunit
4b-like isoform X2 [Glycine max]
gi|571449128|ref|XP_006578049.1| PREDICTED: transcription
initiation factor TFIID subunit 4b-like isoform X3
[Glycine max]
Length = 915
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/57 (64%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Frame = -1
Query: 322 PTSGGVRRFGRN-GTLAHPKIARNISVKDVIAALEKEPQMSKSSLIYRLYEKSSGDS 155
PTSG R+FGR+ T IAR+ISVKDVIA LE+EPQMSKSSL+YRLYE+ D+
Sbjct: 856 PTSGAGRKFGRSHATTPQTSIARSISVKDVIAVLEREPQMSKSSLLYRLYERIHSDT 912
>ref|XP_006472283.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
[Citrus sinensis]
Length = 955
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/58 (63%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
Frame = -1
Query: 316 SGGVRRFGRN-GTLAHPKIARNISVKDVIAALEKEPQMSKSSLIYRLYEKSSGDSPAA 146
SG R+FG+ T++ K+AR I+VKDVIA LE+EPQMSKS+LIYRLYEK S D+ AA
Sbjct: 897 SGSGRKFGKTQATVSQTKVARAITVKDVIAVLEREPQMSKSTLIYRLYEKVSSDAAAA 954
>ref|XP_003527732.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X1 [Glycine max] gi|571458904|ref|XP_006581258.1|
PREDICTED: transcription initiation factor TFIID subunit
4b-like isoform X2 [Glycine max]
gi|571458906|ref|XP_006581259.1| PREDICTED: transcription
initiation factor TFIID subunit 4b-like isoform X3
[Glycine max]
Length = 933
Score = 70.9 bits (172), Expect = 2e-10
Identities = 37/57 (64%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Frame = -1
Query: 322 PTSGGVRRFGRN-GTLAHPKIARNISVKDVIAALEKEPQMSKSSLIYRLYEKSSGDS 155
PTSG R+FGR+ T IAR+ISVKDVIA LE+EPQMSKSSL+YRLYE+ D+
Sbjct: 874 PTSGAGRKFGRSHATTPQNSIARSISVKDVIAVLEREPQMSKSSLLYRLYERIHSDT 930
>ref|XP_006362063.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
[Solanum tuberosum]
Length = 934
Score = 70.1 bits (170), Expect = 3e-10
Identities = 36/60 (60%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = -1
Query: 331 SSMPTSGGVRRFGRN-GTLAHPKIARNISVKDVIAALEKEPQMSKSSLIYRLYEKSSGDS 155
S++ T G VRR GR G + +IAR+I+VKDVIA LE+EPQMSKS+LIYRLYEK+ ++
Sbjct: 869 SAIATPGAVRRAGRTQGIITQTRIARSITVKDVIAVLEREPQMSKSTLIYRLYEKARSNA 928
>ref|XP_006433616.1| hypothetical protein CICLE_v10000177mg [Citrus clementina]
gi|557535738|gb|ESR46856.1| hypothetical protein
CICLE_v10000177mg [Citrus clementina]
Length = 954
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/57 (63%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Frame = -1
Query: 316 SGGVRRFGRN-GTLAHPKIARNISVKDVIAALEKEPQMSKSSLIYRLYEKSSGDSPA 149
SG R+FG+ T++ K+AR I+VKDVIA LE+EPQMSKS+LIYRLYEK S D+ A
Sbjct: 897 SGSGRKFGKTQATVSQTKVARAITVKDVIAVLEREPQMSKSTLIYRLYEKVSSDASA 953
>emb|CBI19420.3| unnamed protein product [Vitis vinifera]
Length = 882
Score = 68.6 bits (166), Expect = 8e-10
Identities = 33/49 (67%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
Frame = -1
Query: 313 GGVRRFGRNGTLA-HPKIARNISVKDVIAALEKEPQMSKSSLIYRLYEK 170
GGVR+FGRN + ++ARNI+VKDVI+ LE+EPQM KS+LIYRLYEK
Sbjct: 826 GGVRKFGRNNAIVPQTRVARNITVKDVISVLEREPQMLKSTLIYRLYEK 874
>emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]
Length = 906
Score = 68.6 bits (166), Expect = 8e-10
Identities = 33/49 (67%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
Frame = -1
Query: 313 GGVRRFGRNGTLA-HPKIARNISVKDVIAALEKEPQMSKSSLIYRLYEK 170
GGVR+FGRN + ++ARNI+VKDVI+ LE+EPQM KS+LIYRLYEK
Sbjct: 850 GGVRKFGRNNAIVPQTRVARNITVKDVISVLEREPQMLKSTLIYRLYEK 898
>gb|EOY15762.1| TBP-associated factor 4, putative isoform 2 [Theobroma cacao]
Length = 944
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/57 (61%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Frame = -1
Query: 316 SGGVRRFGRNGTLA-HPKIARNISVKDVIAALEKEPQMSKSSLIYRLYEKSSGDSPA 149
SG R+FGRN + ++AR ISVKDVIA LE+EPQMSKS+LIYRLYEK ++ A
Sbjct: 887 SGASRKFGRNQVITPQTRVARTISVKDVIAVLEREPQMSKSTLIYRLYEKIRSEAAA 943
>gb|EOY15761.1| TBP-associated factor 4, putative isoform 1 [Theobroma cacao]
Length = 950
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/57 (61%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Frame = -1
Query: 316 SGGVRRFGRNGTLA-HPKIARNISVKDVIAALEKEPQMSKSSLIYRLYEKSSGDSPA 149
SG R+FGRN + ++AR ISVKDVIA LE+EPQMSKS+LIYRLYEK ++ A
Sbjct: 893 SGASRKFGRNQVITPQTRVARTISVKDVIAVLEREPQMSKSTLIYRLYEKIRSEAAA 949
>ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252311 [Vitis vinifera]
Length = 922
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/50 (66%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Frame = -1
Query: 316 SGGVRRFGRNGTLA-HPKIARNISVKDVIAALEKEPQMSKSSLIYRLYEK 170
S GVR+FGRN + ++ARNI+VKDVI+ LE+EPQM KS+LIYRLYEK
Sbjct: 865 SCGVRKFGRNNAIVPQTRVARNITVKDVISVLEREPQMLKSTLIYRLYEK 914
>ref|XP_006415735.1| hypothetical protein EUTSA_v10009915mg [Eutrema salsugineum]
gi|557093506|gb|ESQ34088.1| hypothetical protein
EUTSA_v10009915mg [Eutrema salsugineum]
Length = 624
Score = 65.9 bits (159), Expect = 5e-09
Identities = 33/53 (62%), Positives = 40/53 (75%)
Frame = -1
Query: 310 GVRRFGRNGTLAHPKIARNISVKDVIAALEKEPQMSKSSLIYRLYEKSSGDSP 152
G RRFG+N PK+AR+ISVKDV A +EKEPQMSKS+L+YRLY + D P
Sbjct: 569 GGRRFGKNQ--GSPKVARSISVKDVFAVVEKEPQMSKSTLLYRLYNRICSDVP 619
>ref|XP_004300119.1| PREDICTED: uncharacterized protein LOC101295421 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 65.9 bits (159), Expect = 5e-09
Identities = 33/55 (60%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
Frame = -1
Query: 316 SGGVRRFGRNGTLA-HPKIARNISVKDVIAALEKEPQMSKSSLIYRLYEKSSGDS 155
+G VR+FG+N + ++AR+ISVKDVI+ LE+EPQMSKS LIY LYEK+ DS
Sbjct: 901 AGTVRKFGKNQVMVPQTRVARSISVKDVISVLEREPQMSKSPLIYCLYEKNQSDS 955
>ref|XP_006581260.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X4 [Glycine max] gi|571458910|ref|XP_006581261.1|
PREDICTED: transcription initiation factor TFIID subunit
4b-like isoform X5 [Glycine max]
Length = 929
Score = 64.7 bits (156), Expect = 1e-08
Identities = 34/54 (62%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Frame = -1
Query: 313 GGVRRFGRN-GTLAHPKIARNISVKDVIAALEKEPQMSKSSLIYRLYEKSSGDS 155
G R+FGR+ T IAR+ISVKDVIA LE+EPQMSKSSL+YRLYE+ D+
Sbjct: 873 GAGRKFGRSHATTPQNSIARSISVKDVIAVLEREPQMSKSSLLYRLYERIHSDT 926
>ref|XP_006838543.1| hypothetical protein AMTR_s00002p00199670 [Amborella trichopoda]
gi|548841049|gb|ERN01112.1| hypothetical protein
AMTR_s00002p00199670 [Amborella trichopoda]
Length = 977
Score = 64.7 bits (156), Expect = 1e-08
Identities = 38/59 (64%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Frame = -1
Query: 331 SSMPTSGGVRRFGRNGTLAHP-KIARNISVKDVIAALEKEPQMSKSSLIYRLYEKSSGD 158
SSMP + R FGR HP KI R ISVKDVIA LE+EPQMSKS+L+YRLYE+ S D
Sbjct: 911 SSMPVAR--RPFGRAPAPIHPLKIMRRISVKDVIALLEREPQMSKSTLMYRLYERMSMD 967
>ref|XP_004238100.1| PREDICTED: uncharacterized protein LOC101262209 [Solanum
lycopersicum]
Length = 934
Score = 64.7 bits (156), Expect = 1e-08
Identities = 35/63 (55%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Frame = -1
Query: 331 SSMPTSGGVRRFGRN-GTLAHPKIARNISVKDVIAALEKEPQMSKSSLIYRLYEKSSGDS 155
S++ G VRR R G + +IAR+I+VKDVIA LE+EPQMSKS+LIYRLYEK+ ++
Sbjct: 869 SAIAPPGVVRRAVRTQGIITQTRIARSITVKDVIAVLEREPQMSKSTLIYRLYEKARSNA 928
Query: 154 PAA 146
+A
Sbjct: 929 SSA 931
>gb|ADD09583.1| transcription initiation factor [Trifolium repens]
Length = 934
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/60 (53%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Frame = -1
Query: 331 SSMPTSGGVRRFGRNGTL-AHPKIARNISVKDVIAALEKEPQMSKSSLIYRLYEKSSGDS 155
+S+ S R+FG+N + + +IARNISVKDVIA LE+EPQMSKSSL+YR++++ D+
Sbjct: 872 TSLGNSAAARKFGKNQSPGSQTRIARNISVKDVIAVLEREPQMSKSSLLYRMHDRIHSDT 931