BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00049394
         (322 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004983944.1| PREDICTED: transcription initiation factor T...    57   3e-06
ref|XP_004983942.1| PREDICTED: transcription initiation factor T...    57   3e-06
tpg|DAA53325.1| TPA: hypothetical protein ZEAMMB73_642264 [Zea m...    57   3e-06
ref|XP_004970354.1| PREDICTED: mediator of RNA polymerase II tra...    57   3e-06
ref|XP_004970353.1| PREDICTED: mediator of RNA polymerase II tra...    57   3e-06
ref|XP_004970352.1| PREDICTED: mediator of RNA polymerase II tra...    57   3e-06
ref|XP_004970351.1| PREDICTED: mediator of RNA polymerase II tra...    57   3e-06
ref|XP_004970350.1| PREDICTED: mediator of RNA polymerase II tra...    57   3e-06
gb|EEC75552.1| hypothetical protein OsI_12204 [Oryza sativa Indi...    56   4e-06
gb|ABF96849.1| Transcription initiation factor TFIID component T...    56   4e-06
gb|ABF96848.1| Transcription initiation factor TFIID component T...    56   4e-06
dbj|BAJ94229.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   6e-06
tpg|DAA45897.1| TPA: hypothetical protein ZEAMMB73_958748 [Zea m...    55   1e-05

>ref|XP_004983944.1| PREDICTED: transcription initiation factor TFIID subunit 4-like
           isoform X3 [Setaria italica]
          Length = 764

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/94 (35%), Positives = 48/94 (51%)
 Frame = +2

Query: 2   LHSIFNKLRNNEVSKEDFLRVIRNIVSDQTLRXXXXXXXXXXXXXXXXXXXSNTNLFSLP 181
           + SIF KLR NEVSKE FL+V+RNIV D+ L+                   +N   +SL 
Sbjct: 82  VQSIFAKLRKNEVSKEHFLKVVRNIVGDKVLKLALSEYQMQHTAQAQRNTQTNPGNYSLL 141

Query: 182 AQASSQQVSRGGTQQIYGAQSFPALHSLPSQNVI 283
           +Q S QQ    G+      +++P  H++P +  I
Sbjct: 142 SQVSGQQTVPSGS-MTDEQEAYPGAHTIPMKQAI 174


>ref|XP_004983942.1| PREDICTED: transcription initiation factor TFIID subunit 4-like
           isoform X1 [Setaria italica]
          Length = 761

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/94 (35%), Positives = 48/94 (51%)
 Frame = +2

Query: 2   LHSIFNKLRNNEVSKEDFLRVIRNIVSDQTLRXXXXXXXXXXXXXXXXXXXSNTNLFSLP 181
           + SIF KLR NEVSKE FL+V+RNIV D+ L+                   +N   +SL 
Sbjct: 82  VQSIFAKLRKNEVSKEHFLKVVRNIVGDKVLKLALSEYQMQHTAQAQRNTQTNPGNYSLL 141

Query: 182 AQASSQQVSRGGTQQIYGAQSFPALHSLPSQNVI 283
           +Q S QQ    G+      +++P  H++P +  I
Sbjct: 142 SQVSGQQTVPSGS-MTDEQEAYPGAHTIPMKQAI 174


>tpg|DAA53325.1| TPA: hypothetical protein ZEAMMB73_642264 [Zea mays]
          Length = 642

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 37/106 (34%), Positives = 55/106 (51%)
 Frame = +2

Query: 2   LHSIFNKLRNNEVSKEDFLRVIRNIVSDQTLRXXXXXXXXXXXXXXXXXXXSNTNLFSLP 181
           L +++ KLR NEV+K+DFLRVIRNIV DQ L+                   +N++  SL 
Sbjct: 150 LQTVWAKLRRNEVNKDDFLRVIRNIVGDQMLKQAAHKVFVQMQAQAQRNSQANSSQQSLF 209

Query: 182 AQASSQQVSRGGTQQIYGAQSFPALHSLPSQNVIVPASSPGQPHVP 319
           +Q S+QQ++  G+ Q++  +  P     P+Q      SS  Q   P
Sbjct: 210 SQLSAQQMASSGSAQLHDQKIRPP--GPPNQGQKNQVSSSPQAFAP 253


>ref|XP_004970354.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15-like isoform X5 [Setaria italica]
           gi|514783487|ref|XP_004970355.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 15-like isoform
           X6 [Setaria italica]
          Length = 802

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/83 (38%), Positives = 46/83 (55%)
 Frame = +2

Query: 2   LHSIFNKLRNNEVSKEDFLRVIRNIVSDQTLRXXXXXXXXXXXXXXXXXXXSNTNLFSLP 181
           L +++ KLR NEV K+DFLRVIRNIV DQ L+                   +N +  SL 
Sbjct: 151 LQTVWAKLRRNEVHKDDFLRVIRNIVGDQMLKQAAHKVFLQMQAQAQRNNQANPSQHSLF 210

Query: 182 AQASSQQVSRGGTQQIYGAQSFP 250
           +QAS+QQ+   G+ Q++  +  P
Sbjct: 211 SQASTQQMPSSGSAQLHDQKVRP 233


>ref|XP_004970353.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15-like isoform X4 [Setaria italica]
          Length = 815

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/83 (38%), Positives = 46/83 (55%)
 Frame = +2

Query: 2   LHSIFNKLRNNEVSKEDFLRVIRNIVSDQTLRXXXXXXXXXXXXXXXXXXXSNTNLFSLP 181
           L +++ KLR NEV K+DFLRVIRNIV DQ L+                   +N +  SL 
Sbjct: 191 LQTVWAKLRRNEVHKDDFLRVIRNIVGDQMLKQAAHKVFLQMQAQAQRNNQANPSQHSLF 250

Query: 182 AQASSQQVSRGGTQQIYGAQSFP 250
           +QAS+QQ+   G+ Q++  +  P
Sbjct: 251 SQASTQQMPSSGSAQLHDQKVRP 273


>ref|XP_004970352.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15-like isoform X3 [Setaria italica]
          Length = 816

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/83 (38%), Positives = 46/83 (55%)
 Frame = +2

Query: 2   LHSIFNKLRNNEVSKEDFLRVIRNIVSDQTLRXXXXXXXXXXXXXXXXXXXSNTNLFSLP 181
           L +++ KLR NEV K+DFLRVIRNIV DQ L+                   +N +  SL 
Sbjct: 191 LQTVWAKLRRNEVHKDDFLRVIRNIVGDQMLKQAAHKVFLQMQAQAQRNNQANPSQHSLF 250

Query: 182 AQASSQQVSRGGTQQIYGAQSFP 250
           +QAS+QQ+   G+ Q++  +  P
Sbjct: 251 SQASTQQMPSSGSAQLHDQKVRP 273


>ref|XP_004970351.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15-like isoform X2 [Setaria italica]
          Length = 841

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/83 (38%), Positives = 46/83 (55%)
 Frame = +2

Query: 2   LHSIFNKLRNNEVSKEDFLRVIRNIVSDQTLRXXXXXXXXXXXXXXXXXXXSNTNLFSLP 181
           L +++ KLR NEV K+DFLRVIRNIV DQ L+                   +N +  SL 
Sbjct: 191 LQTVWAKLRRNEVHKDDFLRVIRNIVGDQMLKQAAHKVFLQMQAQAQRNNQANPSQHSLF 250

Query: 182 AQASSQQVSRGGTQQIYGAQSFP 250
           +QAS+QQ+   G+ Q++  +  P
Sbjct: 251 SQASTQQMPSSGSAQLHDQKVRP 273


>ref|XP_004970350.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15-like isoform X1 [Setaria italica]
          Length = 842

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/83 (38%), Positives = 46/83 (55%)
 Frame = +2

Query: 2   LHSIFNKLRNNEVSKEDFLRVIRNIVSDQTLRXXXXXXXXXXXXXXXXXXXSNTNLFSLP 181
           L +++ KLR NEV K+DFLRVIRNIV DQ L+                   +N +  SL 
Sbjct: 191 LQTVWAKLRRNEVHKDDFLRVIRNIVGDQMLKQAAHKVFLQMQAQAQRNNQANPSQHSLF 250

Query: 182 AQASSQQVSRGGTQQIYGAQSFP 250
           +QAS+QQ+   G+ Q++  +  P
Sbjct: 251 SQASTQQMPSSGSAQLHDQKVRP 273


>gb|EEC75552.1| hypothetical protein OsI_12204 [Oryza sativa Indica Group]
          Length = 819

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/103 (34%), Positives = 53/103 (51%)
 Frame = +2

Query: 2   LHSIFNKLRNNEVSKEDFLRVIRNIVSDQTLRXXXXXXXXXXXXXXXXXXXSNTNLFSLP 181
           + SIF KLR NEVSKE FL+V+R IV D+ L+                   + +N +SL 
Sbjct: 186 VQSIFTKLRKNEVSKEHFLKVVRTIVGDKLLKQAAAQYQAQAAHGQRNPQTNPSN-YSLL 244

Query: 182 AQASSQQVSRGGTQQIYGAQSFPALHSLPSQNVIVPASSPGQP 310
           +Q S+QQ    G+      +S+P+ HS+P+      + SP  P
Sbjct: 245 SQVSNQQNVPSGSTSGVEHKSYPSAHSIPANQA---SDSPRPP 284


>gb|ABF96849.1| Transcription initiation factor TFIID component TAF4 family
           protein, expressed [Oryza sativa Japonica Group]
          Length = 685

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/103 (34%), Positives = 53/103 (51%)
 Frame = +2

Query: 2   LHSIFNKLRNNEVSKEDFLRVIRNIVSDQTLRXXXXXXXXXXXXXXXXXXXSNTNLFSLP 181
           + SIF KLR NEVSKE FL+V+R IV D+ L+                   + +N +SL 
Sbjct: 186 VQSIFTKLRKNEVSKEHFLKVVRTIVGDKLLKQAAAQYQAQAAHGQRNPQTNPSN-YSLL 244

Query: 182 AQASSQQVSRGGTQQIYGAQSFPALHSLPSQNVIVPASSPGQP 310
           +Q S+QQ    G+      +S+P+ HS+P+      + SP  P
Sbjct: 245 SQVSNQQNVPSGSTSGVEHKSYPSAHSIPANQA---SDSPRPP 284


>gb|ABF96848.1| Transcription initiation factor TFIID component TAF4 family
           protein, expressed [Oryza sativa Japonica Group]
           gi|222625198|gb|EEE59330.1| hypothetical protein
           OsJ_11407 [Oryza sativa Japonica Group]
          Length = 819

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/103 (34%), Positives = 53/103 (51%)
 Frame = +2

Query: 2   LHSIFNKLRNNEVSKEDFLRVIRNIVSDQTLRXXXXXXXXXXXXXXXXXXXSNTNLFSLP 181
           + SIF KLR NEVSKE FL+V+R IV D+ L+                   + +N +SL 
Sbjct: 186 VQSIFTKLRKNEVSKEHFLKVVRTIVGDKLLKQAAAQYQAQAAHGQRNPQTNPSN-YSLL 244

Query: 182 AQASSQQVSRGGTQQIYGAQSFPALHSLPSQNVIVPASSPGQP 310
           +Q S+QQ    G+      +S+P+ HS+P+      + SP  P
Sbjct: 245 SQVSNQQNVPSGSTSGVEHKSYPSAHSIPANQA---SDSPRPP 284


>dbj|BAJ94229.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 792

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/104 (39%), Positives = 48/104 (46%)
 Frame = +2

Query: 2   LHSIFNKLRNNEVSKEDFLRVIRNIVSDQTLRXXXXXXXXXXXXXXXXXXXSNTNLFSLP 181
           L S++ KLR NEV K+DFLRVIRNIV DQ L+                    N N  SLP
Sbjct: 183 LQSVWAKLRRNEVHKDDFLRVIRNIVGDQMLKQAAHKVFAQMQAQAQRNNQGNANQHSLP 242

Query: 182 AQASSQQVSRGGTQQIYGAQSFPALHSLPSQNVIVPASSPGQPH 313
           +QASS                 PA   LP Q V +P + P Q H
Sbjct: 243 SQASST----------------PA--KLPDQQVRMP-TPPNQGH 267


>tpg|DAA45897.1| TPA: hypothetical protein ZEAMMB73_958748 [Zea mays]
          Length = 808

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 33/100 (33%), Positives = 48/100 (48%)
 Frame = +2

Query: 2   LHSIFNKLRNNEVSKEDFLRVIRNIVSDQTLRXXXXXXXXXXXXXXXXXXXSNTNLFSLP 181
           + SIF KLR NEVSKE FL+ +RNIV D+ L+                   +N + +SL 
Sbjct: 216 VQSIFAKLRKNEVSKEYFLKTVRNIVGDKLLK----QAASQYQMQAQRSPQTNPSNYSLS 271

Query: 182 AQASSQQVSRGGTQQIYGAQSFPALHSLPSQNVIVPASSP 301
            Q S QQ +  G+      + +P  H++P +  I     P
Sbjct: 272 GQVSGQQTAPSGSVTGDEQKGYPGAHTIPMRQAIASTRPP 311