BLASTX nr result

ID: Zingiber23_contig00049334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00049334
         (301 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003562226.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    56   6e-06
ref|XP_003562225.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    56   6e-06

>ref|XP_003562226.1| PREDICTED: F-box/LRR-repeat protein 17-like isoform 2 [Brachypodium
           distachyon]
          Length = 538

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/58 (48%), Positives = 32/58 (55%), Gaps = 12/58 (20%)
 Frame = -2

Query: 183 PRPKSRGSYNCGHCGLPKRGHSC------------PTPEAXXXXXXXXXXXRALSFDD 46
           PRPK+RGSYNCG CGLPK+GH C            P+P +           RALSFDD
Sbjct: 12  PRPKTRGSYNCGRCGLPKKGHVCNLPSPADGGAPTPSPSSSGAASGENRLRRALSFDD 69


>ref|XP_003562225.1| PREDICTED: F-box/LRR-repeat protein 17-like isoform 1 [Brachypodium
           distachyon]
          Length = 575

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/58 (48%), Positives = 32/58 (55%), Gaps = 12/58 (20%)
 Frame = -2

Query: 183 PRPKSRGSYNCGHCGLPKRGHSC------------PTPEAXXXXXXXXXXXRALSFDD 46
           PRPK+RGSYNCG CGLPK+GH C            P+P +           RALSFDD
Sbjct: 12  PRPKTRGSYNCGRCGLPKKGHVCNLPSPADGGAPTPSPSSSGAASGENRLRRALSFDD 69


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