BLASTX nr result
ID: Zingiber23_contig00049244
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00049244
(321 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006646732.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 146 3e-33
gb|EEE67822.1| hypothetical protein OsJ_25587 [Oryza sativa Japo... 145 4e-33
gb|EEC72249.1| hypothetical protein OsI_05378 [Oryza sativa Indi... 145 4e-33
sp|Q0JFN7.2|RH58_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA ... 145 4e-33
ref|XP_004951318.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 143 2e-32
gb|EMT09515.1| DEAD-box ATP-dependent RNA helicase 58, chloropla... 142 3e-32
ref|XP_003565158.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 142 5e-32
gb|EMS47212.1| DEAD-box ATP-dependent RNA helicase 58, chloropla... 141 1e-31
dbj|BAK00276.1| predicted protein [Hordeum vulgare subsp. vulgare] 141 1e-31
dbj|BAD87358.1| putative RNA helicase [Oryza sativa Japonica Group] 141 1e-31
gb|EMJ24082.1| hypothetical protein PRUPE_ppa005191mg [Prunus pe... 140 1e-31
ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Popu... 140 2e-31
ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 140 2e-31
emb|CBI26203.3| unnamed protein product [Vitis vinifera] 140 2e-31
ref|XP_004296920.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 139 4e-31
gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus not... 139 5e-31
gb|EOY05582.1| P-loop containing nucleoside triphosphate hydrola... 139 5e-31
ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putativ... 138 9e-31
ref|XP_004134454.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 137 1e-30
ref|XP_006836561.1| hypothetical protein AMTR_s00131p00060240 [A... 136 3e-30
>ref|XP_006646732.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Oryza brachyantha]
Length = 448
Score = 146 bits (368), Expect = 3e-33
Identities = 67/92 (72%), Positives = 84/92 (91%)
Frame = -3
Query: 319 ASSFSEIREKEYLLVSTDISSRGFDLPQTTHIYNFDLPRSAIDYLHRAGRTGRNPFSENV 140
A SF+E++ K +LLVSTDI+SRGFDLPQT+HIYNFDLP++A+DYLHRAGRTGR PFS++
Sbjct: 350 AISFTEVKGKGFLLVSTDIASRGFDLPQTSHIYNFDLPKTAVDYLHRAGRTGREPFSKSA 409
Query: 139 CSVTSLITQEERFVLQRFENELMFNCEEMFLE 44
CSVT+LIT++E FVLQRF+NEL F+CEE+ LE
Sbjct: 410 CSVTTLITEDELFVLQRFQNELKFHCEELPLE 441
>gb|EEE67822.1| hypothetical protein OsJ_25587 [Oryza sativa Japonica Group]
Length = 395
Score = 145 bits (367), Expect = 4e-33
Identities = 67/92 (72%), Positives = 84/92 (91%)
Frame = -3
Query: 319 ASSFSEIREKEYLLVSTDISSRGFDLPQTTHIYNFDLPRSAIDYLHRAGRTGRNPFSENV 140
A+SF+E++ K +LLVSTDI+SRGFDLPQT+HIYNFDLP++AIDYLHRAGRTGR PFS+
Sbjct: 297 ATSFTEVKGKGFLLVSTDIASRGFDLPQTSHIYNFDLPKTAIDYLHRAGRTGREPFSKLA 356
Query: 139 CSVTSLITQEERFVLQRFENELMFNCEEMFLE 44
CSVT+LIT++E FVLQRF+NEL F+CEE+ +E
Sbjct: 357 CSVTTLITEDEHFVLQRFQNELKFHCEELPVE 388
>gb|EEC72249.1| hypothetical protein OsI_05378 [Oryza sativa Indica Group]
Length = 385
Score = 145 bits (367), Expect = 4e-33
Identities = 67/92 (72%), Positives = 84/92 (91%)
Frame = -3
Query: 319 ASSFSEIREKEYLLVSTDISSRGFDLPQTTHIYNFDLPRSAIDYLHRAGRTGRNPFSENV 140
A+SF+E++ K +LLVSTDI+SRGFDLPQT+HIYNFDLP++AIDYLHRAGRTGR PFS+
Sbjct: 287 ATSFTEVKGKGFLLVSTDIASRGFDLPQTSHIYNFDLPKTAIDYLHRAGRTGREPFSKLA 346
Query: 139 CSVTSLITQEERFVLQRFENELMFNCEEMFLE 44
CSVT+LIT++E FVLQRF+NEL F+CEE+ +E
Sbjct: 347 CSVTTLITEDEHFVLQRFQNELKFHCEELPVE 378
>sp|Q0JFN7.2|RH58_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 58,
chloroplastic; Flags: Precursor
Length = 438
Score = 145 bits (367), Expect = 4e-33
Identities = 67/92 (72%), Positives = 84/92 (91%)
Frame = -3
Query: 319 ASSFSEIREKEYLLVSTDISSRGFDLPQTTHIYNFDLPRSAIDYLHRAGRTGRNPFSENV 140
A+SF+E++ K +LLVSTDI+SRGFDLPQT+HIYNFDLP++AIDYLHRAGRTGR PFS+
Sbjct: 340 ATSFTEVKGKGFLLVSTDIASRGFDLPQTSHIYNFDLPKTAIDYLHRAGRTGREPFSKLA 399
Query: 139 CSVTSLITQEERFVLQRFENELMFNCEEMFLE 44
CSVT+LIT++E FVLQRF+NEL F+CEE+ +E
Sbjct: 400 CSVTTLITEDEHFVLQRFQNELKFHCEELPVE 431
>ref|XP_004951318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Setaria italica]
Length = 456
Score = 143 bits (361), Expect = 2e-32
Identities = 69/100 (69%), Positives = 85/100 (85%)
Frame = -3
Query: 319 ASSFSEIREKEYLLVSTDISSRGFDLPQTTHIYNFDLPRSAIDYLHRAGRTGRNPFSENV 140
A+SFSE+ + ++LVSTDI+SRGFDLPQT+HIYNFDLP++A DYLHRAGRTGR PFS
Sbjct: 357 AASFSEVMGRGFMLVSTDIASRGFDLPQTSHIYNFDLPKTATDYLHRAGRTGREPFSRLE 416
Query: 139 CSVTSLITQEERFVLQRFENELMFNCEEMFLEPVTT*ISS 20
CSVT+LIT++E FVLQRF+NEL F+CEE+ LE + T SS
Sbjct: 417 CSVTTLITEDEHFVLQRFQNELKFHCEELPLESMFTFNSS 456
>gb|EMT09515.1| DEAD-box ATP-dependent RNA helicase 58, chloroplastic [Aegilops
tauschii]
Length = 413
Score = 142 bits (359), Expect = 3e-32
Identities = 66/92 (71%), Positives = 84/92 (91%)
Frame = -3
Query: 319 ASSFSEIREKEYLLVSTDISSRGFDLPQTTHIYNFDLPRSAIDYLHRAGRTGRNPFSENV 140
A+SF+E++ K +LLVSTDI+SRGFDLPQT+HIYNFDLP++A DYLHRAGRTGR PFS++
Sbjct: 315 ATSFTEVKGKGFLLVSTDIASRGFDLPQTSHIYNFDLPKTATDYLHRAGRTGREPFSKSE 374
Query: 139 CSVTSLITQEERFVLQRFENELMFNCEEMFLE 44
CSVT+LIT+EERFVLQRF+NEL F+ +++ LE
Sbjct: 375 CSVTTLITEEERFVLQRFQNELKFHSQQLPLE 406
>ref|XP_003565158.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Brachypodium distachyon]
Length = 446
Score = 142 bits (358), Expect = 5e-32
Identities = 66/96 (68%), Positives = 85/96 (88%)
Frame = -3
Query: 319 ASSFSEIREKEYLLVSTDISSRGFDLPQTTHIYNFDLPRSAIDYLHRAGRTGRNPFSENV 140
A+SF+E++EK +LLVSTDI+SRGFDLPQ +HIYNFDLP++A DYLHRAGRTGR PFS++
Sbjct: 348 ATSFTEVKEKGFLLVSTDIASRGFDLPQISHIYNFDLPKTATDYLHRAGRTGREPFSKSE 407
Query: 139 CSVTSLITQEERFVLQRFENELMFNCEEMFLEPVTT 32
CSVT+LIT++E FVLQRF+NEL F+ +E+ LE + T
Sbjct: 408 CSVTTLITEDEHFVLQRFQNELKFHSQELPLESMFT 443
>gb|EMS47212.1| DEAD-box ATP-dependent RNA helicase 58, chloroplastic [Triticum
urartu]
Length = 441
Score = 141 bits (355), Expect = 1e-31
Identities = 66/96 (68%), Positives = 84/96 (87%)
Frame = -3
Query: 319 ASSFSEIREKEYLLVSTDISSRGFDLPQTTHIYNFDLPRSAIDYLHRAGRTGRNPFSENV 140
A+SF+E++ K +LLVSTDI+SRGFDLPQT+HIYNFDLP++A DYLHRAGRTGR PFS++
Sbjct: 309 ATSFTEVKGKGFLLVSTDIASRGFDLPQTSHIYNFDLPKTATDYLHRAGRTGREPFSKSE 368
Query: 139 CSVTSLITQEERFVLQRFENELMFNCEEMFLEPVTT 32
CSVT+LIT+EE FVLQRF+NEL F+ + + LE + T
Sbjct: 369 CSVTTLITEEEHFVLQRFQNELKFHSQRLPLESMFT 404
>dbj|BAK00276.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 448
Score = 141 bits (355), Expect = 1e-31
Identities = 66/96 (68%), Positives = 84/96 (87%)
Frame = -3
Query: 319 ASSFSEIREKEYLLVSTDISSRGFDLPQTTHIYNFDLPRSAIDYLHRAGRTGRNPFSENV 140
A+SF+E++ K +LLVSTDI+SRGFDLPQT+HIYNFDLP++A DYLHRAGRTGR PFS++
Sbjct: 350 ATSFTEVKGKGFLLVSTDIASRGFDLPQTSHIYNFDLPKTATDYLHRAGRTGREPFSKSE 409
Query: 139 CSVTSLITQEERFVLQRFENELMFNCEEMFLEPVTT 32
CSVT+LIT+EE FVLQRF+NEL F+ + + LE + T
Sbjct: 410 CSVTTLITEEEHFVLQRFQNELKFHSQRLPLESMFT 445
>dbj|BAD87358.1| putative RNA helicase [Oryza sativa Japonica Group]
Length = 377
Score = 141 bits (355), Expect = 1e-31
Identities = 65/90 (72%), Positives = 80/90 (88%)
Frame = -3
Query: 313 SFSEIREKEYLLVSTDISSRGFDLPQTTHIYNFDLPRSAIDYLHRAGRTGRNPFSENVCS 134
S E++ K +LLVSTDI+SRGFDLPQT+HIYNFDLP++AIDYLHRAGRTGR PFS+ CS
Sbjct: 281 SLEEVKGKGFLLVSTDIASRGFDLPQTSHIYNFDLPKTAIDYLHRAGRTGREPFSKLACS 340
Query: 133 VTSLITQEERFVLQRFENELMFNCEEMFLE 44
VT+LIT++E FVLQRF+NEL F+CEE+ +E
Sbjct: 341 VTTLITEDEHFVLQRFQNELKFHCEELPVE 370
>gb|EMJ24082.1| hypothetical protein PRUPE_ppa005191mg [Prunus persica]
Length = 473
Score = 140 bits (354), Expect = 1e-31
Identities = 65/92 (70%), Positives = 81/92 (88%), Gaps = 1/92 (1%)
Frame = -3
Query: 319 ASSFSEIREK-EYLLVSTDISSRGFDLPQTTHIYNFDLPRSAIDYLHRAGRTGRNPFSEN 143
A+S SE+R+ YLLVSTDI++RG DLP+TTHIYN+DLPR+AIDYLHRAGRTGR PFS+
Sbjct: 382 AASLSEVRQAGSYLLVSTDIAARGLDLPETTHIYNYDLPRTAIDYLHRAGRTGRKPFSDK 441
Query: 142 VCSVTSLITQEERFVLQRFENELMFNCEEMFL 47
CSVTS+I +ERFVL+++ENELMFNCEE+ +
Sbjct: 442 KCSVTSIIISKERFVLEKYENELMFNCEELIV 473
>ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Populus trichocarpa]
gi|550329495|gb|EEF01963.2| hypothetical protein
POPTR_0010s10230g [Populus trichocarpa]
Length = 477
Score = 140 bits (353), Expect = 2e-31
Identities = 66/92 (71%), Positives = 81/92 (88%), Gaps = 1/92 (1%)
Frame = -3
Query: 319 ASSFSEIREKE-YLLVSTDISSRGFDLPQTTHIYNFDLPRSAIDYLHRAGRTGRNPFSEN 143
A+S SE+R+ YLLV+TDI++RG DLP+ THIYNF+LPR+A+DYLHRAGRTGR PFS+
Sbjct: 386 AASLSEVRQGGGYLLVATDIAARGVDLPEITHIYNFNLPRTAVDYLHRAGRTGRKPFSDE 445
Query: 142 VCSVTSLITQEERFVLQRFENELMFNCEEMFL 47
C+VTS+I EERFVLQR+ENELMFNCEE+FL
Sbjct: 446 KCNVTSIIMPEERFVLQRYENELMFNCEELFL 477
>ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Vitis vinifera]
Length = 482
Score = 140 bits (352), Expect = 2e-31
Identities = 64/92 (69%), Positives = 80/92 (86%), Gaps = 1/92 (1%)
Frame = -3
Query: 319 ASSFSEIREKE-YLLVSTDISSRGFDLPQTTHIYNFDLPRSAIDYLHRAGRTGRNPFSEN 143
A+S SE+R++ YLL+STDI++RG DLP+TTHIYNFDLPR+ +DYLHRAGR R PFS+
Sbjct: 387 AASLSEVRQRGGYLLISTDIAARGVDLPETTHIYNFDLPRTVVDYLHRAGRAARKPFSDQ 446
Query: 142 VCSVTSLITQEERFVLQRFENELMFNCEEMFL 47
C VT++IT EERFVLQR+ENELMF+CEE+FL
Sbjct: 447 KCCVTNIITSEERFVLQRYENELMFHCEELFL 478
>emb|CBI26203.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 140 bits (352), Expect = 2e-31
Identities = 64/92 (69%), Positives = 80/92 (86%), Gaps = 1/92 (1%)
Frame = -3
Query: 319 ASSFSEIREKE-YLLVSTDISSRGFDLPQTTHIYNFDLPRSAIDYLHRAGRTGRNPFSEN 143
A+S SE+R++ YLL+STDI++RG DLP+TTHIYNFDLPR+ +DYLHRAGR R PFS+
Sbjct: 391 AASLSEVRQRGGYLLISTDIAARGVDLPETTHIYNFDLPRTVVDYLHRAGRAARKPFSDQ 450
Query: 142 VCSVTSLITQEERFVLQRFENELMFNCEEMFL 47
C VT++IT EERFVLQR+ENELMF+CEE+FL
Sbjct: 451 KCCVTNIITSEERFVLQRYENELMFHCEELFL 482
>ref|XP_004296920.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 395
Score = 139 bits (350), Expect = 4e-31
Identities = 64/92 (69%), Positives = 80/92 (86%), Gaps = 1/92 (1%)
Frame = -3
Query: 319 ASSFSEIRE-KEYLLVSTDISSRGFDLPQTTHIYNFDLPRSAIDYLHRAGRTGRNPFSEN 143
A+S SE+R+ YLLVSTDI++RG DLP TTHIYNFDLPR+A+DYLHRAGRTGR PFS+
Sbjct: 304 AASLSELRQGSSYLLVSTDIAARGVDLPDTTHIYNFDLPRTAVDYLHRAGRTGRKPFSDK 363
Query: 142 VCSVTSLITQEERFVLQRFENELMFNCEEMFL 47
C+VT++I EE+FVLQ++ENELMFNCEE+ +
Sbjct: 364 KCTVTNIIMSEEQFVLQKYENELMFNCEELIV 395
>gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus notabilis]
Length = 464
Score = 139 bits (349), Expect = 5e-31
Identities = 65/89 (73%), Positives = 78/89 (87%), Gaps = 1/89 (1%)
Frame = -3
Query: 316 SSFSEIREKE-YLLVSTDISSRGFDLPQTTHIYNFDLPRSAIDYLHRAGRTGRNPFSENV 140
+S SE+R+ YLLVSTD+++RG DLP+TTHIYNFDLPR+A DYLHRAGRTGR PFS
Sbjct: 374 ASLSEVRQGGGYLLVSTDLAARGVDLPETTHIYNFDLPRTATDYLHRAGRTGRKPFSNEE 433
Query: 139 CSVTSLITQEERFVLQRFENELMFNCEEM 53
C+VT++IT EERFVLQR+ENELMFNCEE+
Sbjct: 434 CTVTNIITSEERFVLQRYENELMFNCEEL 462
>gb|EOY05582.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein isoform 1 [Theobroma cacao]
Length = 477
Score = 139 bits (349), Expect = 5e-31
Identities = 66/93 (70%), Positives = 81/93 (87%), Gaps = 1/93 (1%)
Frame = -3
Query: 319 ASSFSEIREKE-YLLVSTDISSRGFDLPQTTHIYNFDLPRSAIDYLHRAGRTGRNPFSEN 143
A+S SE+R+ +LLVSTDI++RG DLP+TT IYNFDLP++AIDYLHRAGRTGR PFS+
Sbjct: 382 AASLSEVRQGGGHLLVSTDIAARGIDLPETTDIYNFDLPKTAIDYLHRAGRTGRKPFSDK 441
Query: 142 VCSVTSLITQEERFVLQRFENELMFNCEEMFLE 44
C+VT++I EERFVLQR+ENELMFNCEE+ LE
Sbjct: 442 KCTVTNIILSEERFVLQRYENELMFNCEELILE 474
>ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223543830|gb|EEF45358.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 476
Score = 138 bits (347), Expect = 9e-31
Identities = 64/92 (69%), Positives = 80/92 (86%), Gaps = 1/92 (1%)
Frame = -3
Query: 319 ASSFSEIREKE-YLLVSTDISSRGFDLPQTTHIYNFDLPRSAIDYLHRAGRTGRNPFSEN 143
A+S SE+++ YLLV+TDI++RG DLP+TTHIYNF+LPR+A+DYLHRAGRTGR PFS+
Sbjct: 385 AASLSEVKQGGGYLLVATDIAARGVDLPETTHIYNFELPRTAVDYLHRAGRTGRKPFSDE 444
Query: 142 VCSVTSLITQEERFVLQRFENELMFNCEEMFL 47
C T++IT EERFVLQR+ENELMFNCEE+ L
Sbjct: 445 KCYATNIITPEERFVLQRYENELMFNCEELIL 476
>ref|XP_004134454.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Cucumis sativus]
gi|449531697|ref|XP_004172822.1| PREDICTED: DEAD-box
ATP-dependent RNA helicase 58, chloroplastic-like
[Cucumis sativus]
Length = 473
Score = 137 bits (346), Expect = 1e-30
Identities = 67/90 (74%), Positives = 77/90 (85%), Gaps = 1/90 (1%)
Frame = -3
Query: 319 ASSFSEIREK-EYLLVSTDISSRGFDLPQTTHIYNFDLPRSAIDYLHRAGRTGRNPFSEN 143
ASS SE+R+ YL+V+TDI +RG DLP+TTHIYNFDLPR AIDYLHRAGRTGR PFSE
Sbjct: 382 ASSLSELRQGGSYLIVATDIVARGIDLPETTHIYNFDLPRCAIDYLHRAGRTGRKPFSEE 441
Query: 142 VCSVTSLITQEERFVLQRFENELMFNCEEM 53
C VT+LIT EERFVLQ+FENEL+F CEE+
Sbjct: 442 KCVVTNLITSEERFVLQKFENELLFICEEV 471
>ref|XP_006836561.1| hypothetical protein AMTR_s00131p00060240 [Amborella trichopoda]
gi|548839100|gb|ERM99414.1| hypothetical protein
AMTR_s00131p00060240 [Amborella trichopoda]
Length = 507
Score = 136 bits (342), Expect = 3e-30
Identities = 63/89 (70%), Positives = 76/89 (85%)
Frame = -3
Query: 313 SFSEIREKEYLLVSTDISSRGFDLPQTTHIYNFDLPRSAIDYLHRAGRTGRNPFSENVCS 134
S SE R+ LLV+TD++SRG DLP+TTHIYNFDLPR+AI+YLHRAGRTGR PFS+ +C+
Sbjct: 410 SLSEARQGRSLLVATDLASRGVDLPETTHIYNFDLPRTAIEYLHRAGRTGRRPFSDEMCT 469
Query: 133 VTSLITQEERFVLQRFENELMFNCEEMFL 47
VT+LI EERFVLQR+ENELMF C+E L
Sbjct: 470 VTNLIAPEERFVLQRYENELMFECKEFVL 498