BLASTX nr result
ID: Zingiber23_contig00049225
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00049225
(235 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003561711.1| PREDICTED: pentatricopeptide repeat-containi... 100 3e-19
ref|XP_004984658.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
ref|XP_002468000.1| hypothetical protein SORBIDRAFT_01g037840 [S... 96 4e-18
gb|AFW88636.1| hypothetical protein ZEAMMB73_169634 [Zea mays] 96 5e-18
gb|EMT31980.1| Pentatricopeptide repeat-containing protein [Aegi... 93 3e-17
dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas] 92 9e-17
ref|XP_004142589.1| PREDICTED: pentatricopeptide repeat-containi... 86 7e-15
gb|EEE58895.1| hypothetical protein OsJ_10524 [Oryza sativa Japo... 85 1e-14
gb|EEC75067.1| hypothetical protein OsI_11193 [Oryza sativa Indi... 85 1e-14
ref|XP_006651297.1| PREDICTED: pentatricopeptide repeat-containi... 83 3e-14
ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containi... 83 3e-14
emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera] 83 3e-14
ref|XP_004300372.1| PREDICTED: pentatricopeptide repeat-containi... 82 7e-14
gb|EOY22664.1| Tetratricopeptide repeat (TPR)-like superfamily p... 82 1e-13
gb|EOY22663.1| Tetratricopeptide repeat-like superfamily protein... 82 1e-13
ref|XP_006296049.1| hypothetical protein CARUB_v10025197mg [Caps... 80 2e-13
ref|XP_002318784.2| hypothetical protein POPTR_0012s11110g [Popu... 80 3e-13
ref|NP_179798.1| pentatricopeptide repeat-containing protein [Ar... 80 3e-13
ref|XP_006366292.1| PREDICTED: pentatricopeptide repeat-containi... 80 4e-13
ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group] g... 80 4e-13
>ref|XP_003561711.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like [Brachypodium distachyon]
Length = 555
Score = 100 bits (248), Expect = 3e-19
Identities = 43/77 (55%), Positives = 55/77 (71%)
Frame = +1
Query: 4 MEPDSVTWRILLSACRRHHRADLGEIAISHMVNHGSGDYVMMWRIYSAKGKWTDAAGVWD 183
++PD+V WR LLSACRRHH+ LGEI I MV GSGDY ++ IYS+ +W D+ VW
Sbjct: 351 VKPDAVIWRALLSACRRHHQTKLGEITIEQMVCQGSGDYTLLSNIYSSINRWVDSENVWK 410
Query: 184 SMKENKVRKKRGMSWVE 234
K+ KVRK +G+SWVE
Sbjct: 411 ERKKKKVRKNKGLSWVE 427
>ref|XP_004984658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like isoform X1 [Setaria italica]
Length = 555
Score = 97.4 bits (241), Expect = 2e-18
Identities = 38/77 (49%), Positives = 55/77 (71%)
Frame = +1
Query: 4 MEPDSVTWRILLSACRRHHRADLGEIAISHMVNHGSGDYVMMWRIYSAKGKWTDAAGVWD 183
++PD+V WR LLSACRR+ + LGE+ + HM HGSGDY ++ IYS+ +W D+ +W
Sbjct: 351 VKPDAVIWRALLSACRRYRQTKLGEVTVEHMACHGSGDYTLLSNIYSSANRWNDSEELWK 410
Query: 184 SMKENKVRKKRGMSWVE 234
K+ K+RK +G+SWVE
Sbjct: 411 QRKQKKIRKSKGLSWVE 427
>ref|XP_002468000.1| hypothetical protein SORBIDRAFT_01g037840 [Sorghum bicolor]
gi|241921854|gb|EER94998.1| hypothetical protein
SORBIDRAFT_01g037840 [Sorghum bicolor]
Length = 583
Score = 96.3 bits (238), Expect = 4e-18
Identities = 39/77 (50%), Positives = 54/77 (70%)
Frame = +1
Query: 4 MEPDSVTWRILLSACRRHHRADLGEIAISHMVNHGSGDYVMMWRIYSAKGKWTDAAGVWD 183
++PD V WR LLSACRR+ + LGE+ I HM HGSGDY ++ +YS+ +W D+ VW
Sbjct: 239 VKPDVVIWRALLSACRRYRQTKLGEVTIEHMACHGSGDYTLLSNMYSSANRWNDSEEVWR 298
Query: 184 SMKENKVRKKRGMSWVE 234
K+ K+RK +G+SWVE
Sbjct: 299 QRKQKKIRKSKGLSWVE 315
>gb|AFW88636.1| hypothetical protein ZEAMMB73_169634 [Zea mays]
Length = 555
Score = 95.9 bits (237), Expect = 5e-18
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +1
Query: 4 MEPDSVTWRILLSACRRHHRADLGEIAISHMVNHGSGDYVMMWRIYSAKGKWTDAAGVWD 183
++PD V WR LLSACRR+ LGE I HM HGSGDY ++ IYS+ +W D+ VW
Sbjct: 351 VKPDVVIWRALLSACRRYRHTKLGEATIEHMACHGSGDYTLLSNIYSSANRWNDSEEVWK 410
Query: 184 SMKENKVRKKRGMSWVE 234
K+ KVRK +G+SWVE
Sbjct: 411 QRKQKKVRKTKGLSWVE 427
>gb|EMT31980.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 781
Score = 93.2 bits (230), Expect = 3e-17
Identities = 39/77 (50%), Positives = 55/77 (71%)
Frame = +1
Query: 4 MEPDSVTWRILLSACRRHHRADLGEIAISHMVNHGSGDYVMMWRIYSAKGKWTDAAGVWD 183
++PD+V WR LLSACRR+H+ LG++ I + GSGDY ++ IYS+ +W D+ VW
Sbjct: 351 VKPDAVIWRALLSACRRYHQTKLGDVTIEQIACQGSGDYTLLSNIYSSINRWDDSEEVWK 410
Query: 184 SMKENKVRKKRGMSWVE 234
MK+ KVRK +G+SWVE
Sbjct: 411 EMKKKKVRKIKGLSWVE 427
>dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]
Length = 514
Score = 91.7 bits (226), Expect = 9e-17
Identities = 40/78 (51%), Positives = 55/78 (70%)
Frame = +1
Query: 1 PMEPDSVTWRILLSACRRHHRADLGEIAISHMVNHGSGDYVMMWRIYSAKGKWTDAAGVW 180
PMEPD + WRILLSACR H +LGE+A++++ SGDYV++ IY ++ +W +A V
Sbjct: 309 PMEPDVIVWRILLSACRTHRNTELGEVAVANISGPKSGDYVLLSNIYCSQNRWDNAQEVR 368
Query: 181 DSMKENKVRKKRGMSWVE 234
+ MKE VRK+RG SW E
Sbjct: 369 EMMKEEGVRKRRGKSWFE 386
>ref|XP_004142589.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like [Cucumis sativus]
Length = 628
Score = 85.5 bits (210), Expect = 7e-15
Identities = 40/78 (51%), Positives = 52/78 (66%)
Frame = +1
Query: 1 PMEPDSVTWRILLSACRRHHRADLGEIAISHMVNHGSGDYVMMWRIYSAKGKWTDAAGVW 180
P+EPD VTWR LLS CR + L E+AI++M SGDYV++ IY + +W +A V
Sbjct: 423 PIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRKSGDYVLLSNIYCSLNRWKEAETVR 482
Query: 181 DSMKENKVRKKRGMSWVE 234
MK N+VRKKRG SW+E
Sbjct: 483 KMMKINRVRKKRGKSWIE 500
>gb|EEE58895.1| hypothetical protein OsJ_10524 [Oryza sativa Japonica Group]
Length = 901
Score = 84.7 bits (208), Expect = 1e-14
Identities = 35/77 (45%), Positives = 51/77 (66%)
Frame = +1
Query: 4 MEPDSVTWRILLSACRRHHRADLGEIAISHMVNHGSGDYVMMWRIYSAKGKWTDAAGVWD 183
++PD+V WR LLSAC R+ + LGEI + + GSGDY ++ IYS+ +W D+ VW
Sbjct: 450 VKPDAVIWRALLSACCRYRQTKLGEITVKEIAFQGSGDYTLLSNIYSSANRWEDSEEVWK 509
Query: 184 SMKENKVRKKRGMSWVE 234
K+ +RK +G+SWVE
Sbjct: 510 ERKKKGIRKSKGLSWVE 526
>gb|EEC75067.1| hypothetical protein OsI_11193 [Oryza sativa Indica Group]
Length = 619
Score = 84.7 bits (208), Expect = 1e-14
Identities = 35/77 (45%), Positives = 51/77 (66%)
Frame = +1
Query: 4 MEPDSVTWRILLSACRRHHRADLGEIAISHMVNHGSGDYVMMWRIYSAKGKWTDAAGVWD 183
++PD+V WR LLSAC R+ + LGEI + + GSGDY ++ IYS+ +W D+ VW
Sbjct: 454 VKPDAVIWRALLSACCRYRQTKLGEITVKEIAFQGSGDYTLLSNIYSSANRWEDSEEVWK 513
Query: 184 SMKENKVRKKRGMSWVE 234
K+ +RK +G+SWVE
Sbjct: 514 ERKKKGIRKSKGLSWVE 530
>ref|XP_006651297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like [Oryza brachyantha]
Length = 555
Score = 83.2 bits (204), Expect = 3e-14
Identities = 35/77 (45%), Positives = 51/77 (66%)
Frame = +1
Query: 4 MEPDSVTWRILLSACRRHHRADLGEIAISHMVNHGSGDYVMMWRIYSAKGKWTDAAGVWD 183
++ D+V WR LLSAC R+ + LGEI I + GSGDY ++ IYS+ +W D+ VW
Sbjct: 351 VKSDTVIWRALLSACCRYRQTKLGEITIKEIACQGSGDYTLLSSIYSSANRWEDSEEVWK 410
Query: 184 SMKENKVRKKRGMSWVE 234
K+ ++RK +G+SWVE
Sbjct: 411 ERKKKRIRKSKGLSWVE 427
>ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
[Vitis vinifera]
Length = 523
Score = 83.2 bits (204), Expect = 3e-14
Identities = 39/78 (50%), Positives = 51/78 (65%)
Frame = +1
Query: 1 PMEPDSVTWRILLSACRRHHRADLGEIAISHMVNHGSGDYVMMWRIYSAKGKWTDAAGVW 180
PMEPD V WR LLSACR +LGE+AI+ + + SGDY+++ +Y + KW A V
Sbjct: 318 PMEPDIVIWRALLSACRNFKNPELGEVAIAKISHLNSGDYILLSNMYCSLEKWDSAERVR 377
Query: 181 DSMKENKVRKKRGMSWVE 234
+ MK + VRK RG SWVE
Sbjct: 378 EMMKRDGVRKNRGRSWVE 395
>emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]
Length = 562
Score = 83.2 bits (204), Expect = 3e-14
Identities = 39/78 (50%), Positives = 51/78 (65%)
Frame = +1
Query: 1 PMEPDSVTWRILLSACRRHHRADLGEIAISHMVNHGSGDYVMMWRIYSAKGKWTDAAGVW 180
PMEPD V WR LLSACR +LGE+AI+ + + SGDY+++ +Y + KW A V
Sbjct: 357 PMEPDIVIWRALLSACRNFKNPELGEVAIAKISHLNSGDYILLSNMYCSLEKWDSAERVR 416
Query: 181 DSMKENKVRKKRGMSWVE 234
+ MK + VRK RG SWVE
Sbjct: 417 EMMKRDGVRKNRGRSWVE 434
>ref|XP_004300372.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like [Fragaria vesca subsp. vesca]
Length = 555
Score = 82.0 bits (201), Expect = 7e-14
Identities = 38/77 (49%), Positives = 51/77 (66%)
Frame = +1
Query: 4 MEPDSVTWRILLSACRRHHRADLGEIAISHMVNHGSGDYVMMWRIYSAKGKWTDAAGVWD 183
+EPD V WR LLSACR H +LGE+AI++M SGDYV++ Y + KW A V +
Sbjct: 351 VEPDVVIWRALLSACRTHRNPELGEVAIANMSRPRSGDYVLLSNTYCSIKKWDSAERVRE 410
Query: 184 SMKENKVRKKRGMSWVE 234
MK+ +VRK +G SW+E
Sbjct: 411 MMKKKRVRKNQGKSWLE 427
>gb|EOY22664.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 2
[Theobroma cacao]
Length = 542
Score = 81.6 bits (200), Expect = 1e-13
Identities = 37/78 (47%), Positives = 53/78 (67%)
Frame = +1
Query: 1 PMEPDSVTWRILLSACRRHHRADLGEIAISHMVNHGSGDYVMMWRIYSAKGKWTDAAGVW 180
PMEPD V WR LLSAC+ + + +LGE+AI+++ SGDYV++ IY + KW A +
Sbjct: 337 PMEPDIVIWRALLSACQTYRKPELGEVAIANISRLESGDYVLLSNIYCSVKKWESAERLR 396
Query: 181 DSMKENKVRKKRGMSWVE 234
+ MK+ +RK RG SW+E
Sbjct: 397 EMMKKKGIRKIRGRSWIE 414
>gb|EOY22663.1| Tetratricopeptide repeat-like superfamily protein isoform 1
[Theobroma cacao]
Length = 568
Score = 81.6 bits (200), Expect = 1e-13
Identities = 37/78 (47%), Positives = 53/78 (67%)
Frame = +1
Query: 1 PMEPDSVTWRILLSACRRHHRADLGEIAISHMVNHGSGDYVMMWRIYSAKGKWTDAAGVW 180
PMEPD V WR LLSAC+ + + +LGE+AI+++ SGDYV++ IY + KW A +
Sbjct: 337 PMEPDIVIWRALLSACQTYRKPELGEVAIANISRLESGDYVLLSNIYCSVKKWESAERLR 396
Query: 181 DSMKENKVRKKRGMSWVE 234
+ MK+ +RK RG SW+E
Sbjct: 397 EMMKKKGIRKIRGRSWIE 414
>ref|XP_006296049.1| hypothetical protein CARUB_v10025197mg [Capsella rubella]
gi|482564757|gb|EOA28947.1| hypothetical protein
CARUB_v10025197mg [Capsella rubella]
Length = 795
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Frame = +1
Query: 1 PMEPDSVTWRILLSACRRHHRADLGEIAISHMV---NHGSGDYVMMWRIYSAKGKWTDAA 171
P+EPD VTW LLSACR H DLG++A ++ SG Y + +YSA GKW +AA
Sbjct: 587 PIEPDVVTWGSLLSACRVHKNVDLGKVAAERLLLIEPENSGAYSALANLYSACGKWEEAA 646
Query: 172 GVWDSMKENKVRKKRGMSWVE 234
+ SMK+ +V+K++G SW+E
Sbjct: 647 KIRKSMKDGRVKKEQGFSWIE 667
>ref|XP_002318784.2| hypothetical protein POPTR_0012s11110g [Populus trichocarpa]
gi|550326851|gb|EEE97004.2| hypothetical protein
POPTR_0012s11110g [Populus trichocarpa]
Length = 543
Score = 80.1 bits (196), Expect = 3e-13
Identities = 37/78 (47%), Positives = 51/78 (65%)
Frame = +1
Query: 1 PMEPDSVTWRILLSACRRHHRADLGEIAISHMVNHGSGDYVMMWRIYSAKGKWTDAAGVW 180
PMEPD V WR LL ACR + + +LGE A++++ SGDYV++ IY ++ +W A GVW
Sbjct: 338 PMEPDVVIWRALLGACRTYKKPELGEAAMANISRLRSGDYVLLSNIYCSQKRWDTAQGVW 397
Query: 181 DSMKENKVRKKRGMSWVE 234
+ MK+ V K RG S E
Sbjct: 398 EMMKKKGVHKVRGKSCFE 415
>ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g22070 gi|4587589|gb|AAD25817.1| hypothetical protein
[Arabidopsis thaliana] gi|330252165|gb|AEC07259.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 786
Score = 80.1 bits (196), Expect = 3e-13
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Frame = +1
Query: 1 PMEPDSVTWRILLSACRRHHRADLGEIAISHMV---NHGSGDYVMMWRIYSAKGKWTDAA 171
P+EPD VTW LLSACR H DLG++A ++ SG Y + +YSA GKW +AA
Sbjct: 578 PIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAA 637
Query: 172 GVWDSMKENKVRKKRGMSWVE 234
+ SMK+ +V+K++G SW+E
Sbjct: 638 KIRKSMKDGRVKKEQGFSWIE 658
>ref|XP_006366292.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like [Solanum tuberosum]
Length = 556
Score = 79.7 bits (195), Expect = 4e-13
Identities = 38/78 (48%), Positives = 51/78 (65%)
Frame = +1
Query: 1 PMEPDSVTWRILLSACRRHHRADLGEIAISHMVNHGSGDYVMMWRIYSAKGKWTDAAGVW 180
P+EPD+V WR LSACR H +++GE+A + + + GSGDYV++ IY + KW +A V
Sbjct: 351 PIEPDAVIWRTFLSACRIHKNSEMGEVASTKISHLGSGDYVLLSNIYCSTKKWDNAEKVR 410
Query: 181 DSMKENKVRKKRGMSWVE 234
MK VRK G SWVE
Sbjct: 411 CVMKWKGVRKNSGKSWVE 428
>ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza
sativa Japonica Group] gi|108711328|gb|ABF99123.1|
pentatricopeptide, putative, expressed [Oryza sativa
Japonica Group] gi|113549901|dbj|BAF13344.1|
Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 804
Score = 79.7 bits (195), Expect = 4e-13
Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Frame = +1
Query: 1 PMEPDSVTWRILLSACRRHHRADLGEIAISHMVN---HGSGDYVMMWRIYSAKGKWTDAA 171
P+EPD++ W LLSACR H A+L E+A +++ + SG Y + +YSA G+W+DAA
Sbjct: 596 PVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAA 655
Query: 172 GVWDSMKENKVRKKRGMSW 228
+W + KE VRK+ G SW
Sbjct: 656 RIWKARKEKAVRKETGFSW 674