BLASTX nr result
ID: Zingiber23_contig00049220
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00049220
(321 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] gi|54035746... 108 6e-22
ref|YP_002117531.1| ORF3 [Cycad leaf necrosis virus] gi|19439916... 106 3e-21
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|... 103 3e-20
ref|YP_004581513.1| RNaseH/reverse transcriptase [Sweetpotato ba... 102 7e-20
ref|YP_001036293.1| ORF3 protein [Dioscorea bacilliform virus] g... 102 7e-20
gb|AHG94942.1| ORF3, partial [Dioscorea bacilliform virus] 100 3e-19
emb|CAA64269.1| unnamed protein product [Dioscorea bacilliform v... 100 3e-19
ref|YP_002916057.1| polyprotein [Sweetpotato badnavirus B] gi|23... 100 3e-19
gb|ABI47987.1| ORF4 protein [Dioscorea bacilliform virus] 99 6e-19
emb|CAA64266.1| unnamed protein product [Dioscorea bacilliform v... 98 1e-18
gb|AHG32725.1| ORF3, partial [Dioscorea rotundata] 97 2e-18
gb|ADN96024.1| putative polyprotein [Pineapple bacilliform comos... 96 6e-18
gb|ADN96023.1| putative polyprotein [Pineapple bacilliform comos... 96 6e-18
gb|ADN96018.1| polyprotein [Pineapple bacilliform comosus virus] 96 6e-18
gb|ACB14294.1| polyprotein, partial [Pineapple bacilliform comos... 96 6e-18
gb|ACB14290.1| polyprotein, partial [Pineapple bacilliform comos... 96 6e-18
ref|YP_001293182.1| hypothetical protein LBBV_gp3 [Lucky bamboo ... 96 6e-18
ref|YP_610965.1| hypothetical protein DMV_gp3 [Dracaena mottle v... 96 6e-18
gb|ADN96025.1| putative polyprotein [Pineapple bacilliform comos... 95 8e-18
gb|ACB14292.1| polyprotein, partial [Pineapple bacilliform comos... 95 8e-18
>ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] gi|540357465|gb|AGV08293.1| ORF3
[Piper yellow mottle virus]
Length = 1925
Score = 108 bits (271), Expect = 6e-22
Identities = 51/73 (69%), Positives = 63/73 (86%)
Frame = -3
Query: 319 LDKTELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLAD 140
LDK E++IRTDCQAIISFFNKS+ NK SRVR + FTD+ITGLG++++FQHI+ K+N LAD
Sbjct: 1759 LDKREIIIRTDCQAIISFFNKSSVNKPSRVRWIGFTDYITGLGIDVKFQHIDGKENSLAD 1818
Query: 139 ALSRLVCSLIGPW 101
+LSRL CSLI W
Sbjct: 1819 SLSRLTCSLIRQW 1831
>ref|YP_002117531.1| ORF3 [Cycad leaf necrosis virus] gi|194399161|gb|ACF60613.1| ORF3
[Cycad leaf necrosis virus]
Length = 1916
Score = 106 bits (265), Expect = 3e-21
Identities = 49/74 (66%), Positives = 64/74 (86%)
Frame = -3
Query: 319 LDKTELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLAD 140
LDK E++IRTDCQAIISFF+K+++NK SRVR +TFTDFITG+G+ ++F+HI+ KDNLLAD
Sbjct: 1715 LDKQEVVIRTDCQAIISFFDKTSQNKPSRVRWLTFTDFITGIGIPVRFEHISGKDNLLAD 1774
Query: 139 ALSRLVCSLIGPWT 98
LSRLV ++ WT
Sbjct: 1775 TLSRLVLCMVQGWT 1788
>ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|gb|AEF56561.1|
polyprotein [Fig badnavirus 1]
Length = 1837
Score = 103 bits (256), Expect = 3e-20
Identities = 49/68 (72%), Positives = 60/68 (88%)
Frame = -3
Query: 319 LDKTELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLAD 140
LDK EL+IRTDCQAIISFFNKSA NK SRVR V FTDFITG+G+ ++F+HI+ +DN+LAD
Sbjct: 1643 LDKKELIIRTDCQAIISFFNKSALNKPSRVRWVAFTDFITGIGINVEFEHIDGRDNVLAD 1702
Query: 139 ALSRLVCS 116
+LSRL+ S
Sbjct: 1703 SLSRLINS 1710
>ref|YP_004581513.1| RNaseH/reverse transcriptase [Sweetpotato badnavirus A]
gi|237846574|gb|ACN56746.1| RNaseH/reverse transcriptase
[Sweetpotato badnavirus A]
Length = 794
Score = 102 bits (253), Expect = 7e-20
Identities = 50/79 (63%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -3
Query: 319 LDKTELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLAD 140
LDK E++IRTDC+AI+SFFNKSA NK SR R ++FTD+ITG G++I+ +HI+ KDN+LAD
Sbjct: 582 LDKKEMIIRTDCEAIVSFFNKSASNKPSRARWISFTDYITGTGIKIRIEHIDGKDNILAD 641
Query: 139 ALSRLVCSL-IGPWTPSEK 86
LSRLV SL I W EK
Sbjct: 642 YLSRLVFSLIIAEWKTQEK 660
>ref|YP_001036293.1| ORF3 protein [Dioscorea bacilliform virus]
gi|113901272|gb|ABI47983.1| ORF3 protein [Dioscorea
bacilliform virus]
Length = 1887
Score = 102 bits (253), Expect = 7e-20
Identities = 48/81 (59%), Positives = 63/81 (77%), Gaps = 3/81 (3%)
Frame = -3
Query: 319 LDKTELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLAD 140
LD+ EL+IR+DCQA+ISF+NKS+ NK SRVR + F DF+TGLG+++ F+HI+ KDN LAD
Sbjct: 1769 LDRKELLIRSDCQALISFYNKSSENKPSRVRWIAFNDFVTGLGIDVTFEHIDGKDNQLAD 1828
Query: 139 ALSRLVCSLI---GPWTPSEK 86
+LSRLV SL+ G W K
Sbjct: 1829 SLSRLVTSLVRHEGKWQQQRK 1849
>gb|AHG94942.1| ORF3, partial [Dioscorea bacilliform virus]
Length = 1395
Score = 100 bits (248), Expect = 3e-19
Identities = 46/70 (65%), Positives = 59/70 (84%)
Frame = -3
Query: 319 LDKTELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLAD 140
LDK EL+IRTDC AI++F+NKS+ NK SRVR + F DF+TGLG+ + +HI+ KDN+LAD
Sbjct: 1278 LDKKELLIRTDCHAIMAFYNKSSCNKPSRVRWIAFNDFLTGLGIPVTIEHIDGKDNVLAD 1337
Query: 139 ALSRLVCSLI 110
ALSRLVCS+I
Sbjct: 1338 ALSRLVCSII 1347
>emb|CAA64269.1| unnamed protein product [Dioscorea bacilliform virus]
Length = 547
Score = 100 bits (248), Expect = 3e-19
Identities = 46/70 (65%), Positives = 60/70 (85%)
Frame = -3
Query: 319 LDKTELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLAD 140
LDK EL+IRTDCQAI++F+NKS+ NK SRVR + F DF+TGLG+ + +HI+ K+N+LAD
Sbjct: 430 LDKKELLIRTDCQAIMAFYNKSSCNKPSRVRWIAFNDFLTGLGIPVTIEHIDGKNNVLAD 489
Query: 139 ALSRLVCSLI 110
ALSRLVCS+I
Sbjct: 490 ALSRLVCSII 499
>ref|YP_002916057.1| polyprotein [Sweetpotato badnavirus B] gi|237846580|gb|ACN56751.1|
polyprotein [Sweetpotato badnavirus B]
Length = 771
Score = 99.8 bits (247), Expect = 3e-19
Identities = 48/70 (68%), Positives = 59/70 (84%)
Frame = -3
Query: 319 LDKTELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLAD 140
LDK E++IRTDCQAI+SFFNKSA NK SR R ++FTD+ITG G++I+ +HI+ KDN LAD
Sbjct: 558 LDKKEMVIRTDCQAIVSFFNKSASNKPSRARWISFTDYITGTGIKIRIEHIDGKDNTLAD 617
Query: 139 ALSRLVCSLI 110
LSRLV SLI
Sbjct: 618 YLSRLVFSLI 627
>gb|ABI47987.1| ORF4 protein [Dioscorea bacilliform virus]
Length = 592
Score = 99.0 bits (245), Expect = 6e-19
Identities = 46/76 (60%), Positives = 62/76 (81%), Gaps = 3/76 (3%)
Frame = -3
Query: 319 LDKTELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLAD 140
LD+ EL+IR+DCQA+ISF+NKS+ NK SRVR + F DF+TGLG+++ F+HI+ KD+ LAD
Sbjct: 474 LDRKELLIRSDCQALISFYNKSSENKPSRVRWIAFNDFVTGLGIDVTFEHIDGKDSQLAD 533
Query: 139 ALSRLVCSLI---GPW 101
+LSRLV SL+ G W
Sbjct: 534 SLSRLVTSLVRHEGKW 549
>emb|CAA64266.1| unnamed protein product [Dioscorea bacilliform virus]
Length = 551
Score = 98.2 bits (243), Expect = 1e-18
Identities = 45/70 (64%), Positives = 59/70 (84%)
Frame = -3
Query: 319 LDKTELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLAD 140
LDK EL+IRTDC AI++F+NKS+ NK SRVR + F DF+TGLG+ + +HI+ K+N+LAD
Sbjct: 430 LDKKELLIRTDCHAIMAFYNKSSCNKPSRVRWIAFNDFLTGLGIPVTIEHIDGKNNVLAD 489
Query: 139 ALSRLVCSLI 110
ALSRLVCS+I
Sbjct: 490 ALSRLVCSII 499
>gb|AHG32725.1| ORF3, partial [Dioscorea rotundata]
Length = 1257
Score = 97.4 bits (241), Expect = 2e-18
Identities = 45/69 (65%), Positives = 59/69 (85%)
Frame = -3
Query: 319 LDKTELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLAD 140
LDK EL+IR+DCQA+ISF+NKS+ NK SRVR + F DF+TGLG+++ F+HI+ K+N LAD
Sbjct: 1137 LDKKELLIRSDCQALISFYNKSSENKPSRVRWIAFHDFVTGLGVDVTFEHIDGKNNQLAD 1196
Query: 139 ALSRLVCSL 113
+LSRLV SL
Sbjct: 1197 SLSRLVTSL 1205
>gb|ADN96024.1| putative polyprotein [Pineapple bacilliform comosus virus]
Length = 410
Score = 95.5 bits (236), Expect = 6e-18
Identities = 43/70 (61%), Positives = 59/70 (84%)
Frame = -3
Query: 319 LDKTELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLAD 140
L++ EL++RTDCQAI+SF+ K A NK SRVR +TF+DFITG+G+ ++F+HI+ KDNLLAD
Sbjct: 220 LNQKELVVRTDCQAIVSFYEKMANNKPSRVRWLTFSDFITGIGVPVKFEHIDGKDNLLAD 279
Query: 139 ALSRLVCSLI 110
LSRLV ++
Sbjct: 280 TLSRLVVMML 289
>gb|ADN96023.1| putative polyprotein [Pineapple bacilliform comosus virus]
Length = 410
Score = 95.5 bits (236), Expect = 6e-18
Identities = 43/70 (61%), Positives = 59/70 (84%)
Frame = -3
Query: 319 LDKTELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLAD 140
L++ EL++RTDCQAI+SF+ K A NK SRVR +TF+DFITG+G+ ++F+HI+ KDNLLAD
Sbjct: 220 LNQKELVVRTDCQAIVSFYEKMANNKPSRVRWLTFSDFITGIGVPVKFEHIDGKDNLLAD 279
Query: 139 ALSRLVCSLI 110
LSRLV ++
Sbjct: 280 TLSRLVVMML 289
>gb|ADN96018.1| polyprotein [Pineapple bacilliform comosus virus]
Length = 772
Score = 95.5 bits (236), Expect = 6e-18
Identities = 43/70 (61%), Positives = 59/70 (84%)
Frame = -3
Query: 319 LDKTELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLAD 140
L++ EL++RTDCQAI+SF+ K A NK SRVR +TF+DFITG+G+ ++F+HI+ KDNLLAD
Sbjct: 582 LNQKELVVRTDCQAIVSFYEKMANNKPSRVRWLTFSDFITGIGVPVKFEHIDGKDNLLAD 641
Query: 139 ALSRLVCSLI 110
LSRLV ++
Sbjct: 642 TLSRLVVMML 651
>gb|ACB14294.1| polyprotein, partial [Pineapple bacilliform comosus virus]
Length = 278
Score = 95.5 bits (236), Expect = 6e-18
Identities = 43/70 (61%), Positives = 59/70 (84%)
Frame = -3
Query: 319 LDKTELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLAD 140
L++ EL++RTDCQAI+SF+ K A NK SRVR +TF+DFITG+G+ ++F+HI+ KDNLLAD
Sbjct: 88 LNQKELVVRTDCQAIVSFYEKMANNKPSRVRWLTFSDFITGIGVPVKFEHIDGKDNLLAD 147
Query: 139 ALSRLVCSLI 110
LSRLV ++
Sbjct: 148 TLSRLVVMML 157
>gb|ACB14290.1| polyprotein, partial [Pineapple bacilliform comosus virus]
Length = 425
Score = 95.5 bits (236), Expect = 6e-18
Identities = 43/70 (61%), Positives = 59/70 (84%)
Frame = -3
Query: 319 LDKTELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLAD 140
L++ EL++RTDCQAI+SF+ K A NK SRVR +TF+DFITG+G+ ++F+HI+ KDNLLAD
Sbjct: 235 LNQKELVVRTDCQAIVSFYEKMANNKPSRVRWLTFSDFITGIGVPVKFEHIDGKDNLLAD 294
Query: 139 ALSRLVCSLI 110
LSRLV ++
Sbjct: 295 TLSRLVVMML 304
>ref|YP_001293182.1| hypothetical protein LBBV_gp3 [Lucky bamboo bacilliform virus]
gi|148645292|gb|ABR01170.1| hypothetical protein [Lucky
bamboo bacilliform virus]
Length = 1913
Score = 95.5 bits (236), Expect = 6e-18
Identities = 46/78 (58%), Positives = 62/78 (79%), Gaps = 3/78 (3%)
Frame = -3
Query: 319 LDKTELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLAD 140
LD+ E+++RTDCQAIISF+NKS+ NK SRVR + FTDFITGLG+++QF+HI + N+LAD
Sbjct: 1702 LDRKEIILRTDCQAIISFYNKSSVNKPSRVRWLAFTDFITGLGIDVQFEHIKGEQNVLAD 1761
Query: 139 ALSRLVCSLI---GPWTP 95
LSRL L+ P++P
Sbjct: 1762 TLSRLTFVLLQVPDPFSP 1779
>ref|YP_610965.1| hypothetical protein DMV_gp3 [Dracaena mottle virus]
gi|92430216|gb|ABE77344.1| hypothetical protein [Dracaena
mottle virus]
Length = 1916
Score = 95.5 bits (236), Expect = 6e-18
Identities = 46/78 (58%), Positives = 62/78 (79%), Gaps = 3/78 (3%)
Frame = -3
Query: 319 LDKTELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLAD 140
LD+ E+++RTDCQAIISF+NKS+ NK SRVR + FTDFITGLG+++QF+HI + N+LAD
Sbjct: 1705 LDRKEIILRTDCQAIISFYNKSSVNKPSRVRWLAFTDFITGLGIDVQFEHIKGEQNVLAD 1764
Query: 139 ALSRLVCSLI---GPWTP 95
LSRL L+ P++P
Sbjct: 1765 TLSRLTFVLLQVPDPFSP 1782
>gb|ADN96025.1| putative polyprotein [Pineapple bacilliform comosus virus]
Length = 412
Score = 95.1 bits (235), Expect = 8e-18
Identities = 43/70 (61%), Positives = 59/70 (84%)
Frame = -3
Query: 319 LDKTELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLAD 140
L++ EL++RTDCQAI+SF+ K A NK SRVR +TF+DFITG+G+ ++F+HI+ KDNLLAD
Sbjct: 222 LNQKELVVRTDCQAIVSFYXKMANNKPSRVRWLTFSDFITGIGVPVKFEHIDGKDNLLAD 281
Query: 139 ALSRLVCSLI 110
LSRLV ++
Sbjct: 282 TLSRLVVMML 291
>gb|ACB14292.1| polyprotein, partial [Pineapple bacilliform comosus virus]
Length = 283
Score = 95.1 bits (235), Expect = 8e-18
Identities = 43/70 (61%), Positives = 58/70 (82%)
Frame = -3
Query: 319 LDKTELMIRTDCQAIISFFNKSARNKQSRVRCVTFTDFITGLGMEIQFQHINDKDNLLAD 140
L + EL++RTDCQAI+SF+ K A NK SRVR +TF+DFITG+G+ ++F+HI+ KDNLLAD
Sbjct: 88 LSQKELVVRTDCQAIVSFYEKMANNKPSRVRWLTFSDFITGIGVPVKFEHIDGKDNLLAD 147
Query: 139 ALSRLVCSLI 110
LSRLV ++
Sbjct: 148 TLSRLVVMML 157